RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 HSPG2P98160 4391 aa5.54□□□□□ -1.52
SHANK3-202ENST00000414786 KRTAP20-1Q3LI63 56 aa5.54□□□□□ -1.52
SHANK3-202ENST00000414786 KRTAP9-6A0A140TA67 174 aa5.5□□□□□ -1.53
SHANK3-202ENST00000414786 HERC1Q15751 4861 aa5.41□□□□□ -1.54
SHANK3-202ENST00000414786 TNXBP22105 4242 aa5.35□□□□□ -1.55
SHANK3-202ENST00000414786 RYR2Q92736 4967 aa5.31□□□□□ -1.56
SHANK3-202ENST00000414786 LRP2P98164 4655 aa5.31□□□□□ -1.56
SHANK3-202ENST00000414786 KRTAP9-7A8MTY7 169 aa5.26□□□□□ -1.57
SHANK3-202ENST00000414786 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
SHANK3-202ENST00000414786 KRTAP6-2Q3LI66 62 aa5.14□□□□□ -1.59
SHANK3-202ENST00000414786 KRTAP2-3P0C7H8 128 aa5.12□□□□□ -1.59
SHANK3-202ENST00000414786 KRTAP2-4Q9BYR9 128 aa5.12□□□□□ -1.59
SHANK3-202ENST00000414786 KRTAP2-1Q9BYU5 128 aa5.12□□□□□ -1.59
SHANK3-202ENST00000414786 HYDINQ4G0P3 5121 aa5.11□□□□□ -1.59
SHANK3-202ENST00000414786 FSIP2Q5CZC0 6907 aa5.1□□□□□ -1.59
SHANK3-202ENST00000414786 MT1AP04731 61 aa5.06□□□□□ -1.6
SHANK3-202ENST00000414786 KIAA1109Q2LD37 5005 aa5.05□□□□□ -1.6
SHANK3-202ENST00000414786 HERC2O95714 4834 aa4.99□□□□□ -1.61
SHANK3-202ENST00000414786 KMT2CQ8NEZ4 4911 aaKnown RBP4.98□□□□□ -1.61
SHANK3-202ENST00000414786 KRTAP6-1Q3LI64 71 aa4.96□□□□□ -1.62
SHANK3-202ENST00000414786 MUC17Q685J3 4493 aa4.92□□□□□ -1.62
SHANK3-202ENST00000414786 KRTAP19-2Q3LHN2 52 aa4.92□□□□□ -1.62
SHANK3-202ENST00000414786 LCE2AQ5TA79 106 aaPredicted RBP4.9□□□□□ -1.62
SHANK3-202ENST00000414786 PCLOQ9Y6V0 5065 aa4.86□□□□□ -1.63
SHANK3-202ENST00000414786 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
SHANK3-202ENST00000414786 KRTAP19-7Q3SYF9 63 aa4.85□□□□□ -1.63
SHANK3-202ENST00000414786 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.81□□□□□ -1.64
SHANK3-202ENST00000414786 BIRC6Q9NR09 4857 aa4.8□□□□□ -1.64
SHANK3-202ENST00000414786 KRTAP9-4Q9BYQ2 154 aa4.79□□□□□ -1.64
SHANK3-202ENST00000414786 KRTAP2-2Q9BYT5 123 aa4.77□□□□□ -1.65
SHANK3-202ENST00000414786 KRTAP9-9Q9BYP9 154 aa4.73□□□□□ -1.65
SHANK3-202ENST00000414786 KRTAP6-3Q3LI67 103 aa4.71□□□□□ -1.66
SHANK3-202ENST00000414786 EPPK1P58107 5090 aaKnown RBP4.69□□□□□ -1.66
SHANK3-202ENST00000414786 MUC2Q02817 5179 aa4.63□□□□□ -1.67
SHANK3-202ENST00000414786 KRTAP20-2Q3LI61 65 aa4.63□□□□□ -1.67
SHANK3-202ENST00000414786 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
SHANK3-202ENST00000414786 KRTAP9-6A8MVA2 160 aa4.57□□□□□ -1.68
SHANK3-202ENST00000414786 HMCN2Q8NDA2 5059 aa4.54□□□□□ -1.68
SHANK3-202ENST00000414786 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
SHANK3-202ENST00000414786 KRTAP4-4Q9BYR3 166 aa4.48□□□□□ -1.69
SHANK3-202ENST00000414786 KRTAP4-6Q9BYQ5 205 aa4.47□□□□□ -1.69
SHANK3-202ENST00000414786 ABCA13Q86UQ4 5058 aa4.45□□□□□ -1.7
SHANK3-202ENST00000414786 KRTAP4-12Q9BQ66 201 aa4.42□□□□□ -1.7
SHANK3-202ENST00000414786 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
SHANK3-202ENST00000414786 RNF213Q63HN8 5207 aa4.28□□□□□ -1.72
SHANK3-202ENST00000414786 FAT4Q6V0I7 4981 aa4.25□□□□□ -1.73
SHANK3-202ENST00000414786 UBR4Q5T4S7 5183 aa4.23□□□□□ -1.73
SHANK3-202ENST00000414786 DSTQ03001 7570 aaKnown RBP4.17□□□□□ -1.74
SHANK3-202ENST00000414786 MACF1Q9UPN3 7388 aaKnown RBP4.16□□□□□ -1.74
SHANK3-202ENST00000414786 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
SHANK3-202ENST00000414786 KMT2DO14686 5537 aa3.96□□□□□ -1.78
SHANK3-202ENST00000414786 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
SHANK3-202ENST00000414786 NEBP20929 6669 aa3.76□□□□□ -1.81
SHANK3-202ENST00000414786 USH2AO75445 5202 aa3.72□□□□□ -1.81
SHANK3-202ENST00000414786 SSPOA2VEC9 5147 aa3.62□□□□□ -1.83
SHANK3-202ENST00000414786 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
SHANK3-202ENST00000414786 KRTAP5-9P26371 169 aa3.42□□□□□ -1.86
SHANK3-202ENST00000414786 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
SHANK3-202ENST00000414786 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
SHANK3-202ENST00000414786 MUC12Q9UKN1 5478 aa3.19□□□□□ -1.9
SHANK3-202ENST00000414786 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
SHANK3-202ENST00000414786 MDN1Q9NU22 5596 aa3.09□□□□□ -1.91
SHANK3-202ENST00000414786 GPR98Q8WXG9 6306 aa3.06□□□□□ -1.92
SHANK3-202ENST00000414786 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
SHANK3-202ENST00000414786 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
SHANK3-202ENST00000414786 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
SHANK3-202ENST00000414786 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
SHANK3-202ENST00000414786 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
SHANK3-202ENST00000414786 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
SHANK3-202ENST00000414786 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
SHANK3-202ENST00000414786 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
SHANK3-202ENST00000414786 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
SHANK3-202ENST00000414786 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
SHANK3-202ENST00000414786 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
SHANK3-202ENST00000414786 AHNAKQ09666 5890 aaKnown RBP2.09□□□□□ -2.08
SHANK3-202ENST00000414786 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
SHANK3-202ENST00000414786 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
SHANK3-202ENST00000414786 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 99.3 ms