RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 MT1LQ93083 61 aa5.52□□□□□ -1.53
ACTB-202ENST00000414620 MT4P47944 62 aa5.49□□□□□ -1.53
ACTB-202ENST00000414620 LCE3AQ5TA76 89 aa5.49□□□□□ -1.53
ACTB-202ENST00000414620 C10orf95Q9H7T3 257 aa5.48□□□□□ -1.53
ACTB-202ENST00000414620 Q1T7F1 81 aa5.47□□□□□ -1.53
ACTB-202ENST00000414620 LCE4AQ5TA78 99 aa5.46□□□□□ -1.54
ACTB-202ENST00000414620 KRTAP4-3Q9BYR4 195 aa5.46□□□□□ -1.54
ACTB-202ENST00000414620 TNP1P09430 55 aa5.44□□□□□ -1.54
ACTB-202ENST00000414620 BRK1Q8WUW1 75 aa5.41□□□□□ -1.54
ACTB-202ENST00000414620 KRTAP5-4Q6L8H1 288 aa5.32□□□□□ -1.56
ACTB-202ENST00000414620 PRR15LQ9BU68 103 aa5.32□□□□□ -1.56
ACTB-202ENST00000414620 HMCN1Q96RW7 5635 aa5.32□□□□□ -1.56
ACTB-202ENST00000414620 KRTAP4-6Q9BYQ5 205 aa5.29□□□□□ -1.56
ACTB-202ENST00000414620 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
ACTB-202ENST00000414620 PMAIP1Q13794 54 aa5.27□□□□□ -1.57
ACTB-202ENST00000414620 KRTAP12-3P60328 96 aa5.25□□□□□ -1.57
ACTB-202ENST00000414620 LINC01558Q9Y6Z2 57 aa5.24□□□□□ -1.57
ACTB-202ENST00000414620 PSPHP1O15172 72 aa5.2□□□□□ -1.58
ACTB-202ENST00000414620 AHNAK2Q8IVF2 5795 aa5.2□□□□□ -1.58
ACTB-202ENST00000414620 KRTAP5-10Q6L8G5 202 aa5.18□□□□□ -1.58
ACTB-202ENST00000414620 CDC42SE1Q9NRR8 79 aa5.17□□□□□ -1.58
ACTB-202ENST00000414620 A6NED7 52 aa5.15□□□□□ -1.59
ACTB-202ENST00000414620 KTN1-AS1Q86SY8 53 aa5.15□□□□□ -1.59
ACTB-202ENST00000414620 UQCR11O14957 56 aa5.13□□□□□ -1.59
ACTB-202ENST00000414620 KRTAP20-2Q3LI61 65 aa5.06□□□□□ -1.6
ACTB-202ENST00000414620 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
ACTB-202ENST00000414620 KRTAP5-3Q6L8H2 238 aa5.05□□□□□ -1.6
ACTB-202ENST00000414620 KRTAP25-1Q3LHN0 102 aa5.04□□□□□ -1.6
ACTB-202ENST00000414620 MIR22HGQ0VDD5 57 aa5.03□□□□□ -1.6
ACTB-202ENST00000414620 LOC100996750A0A140TA64 210 aa5.02□□□□□ -1.61
ACTB-202ENST00000414620 KRTAP5-7Q6L8G8 165 aa4.99□□□□□ -1.61
ACTB-202ENST00000414620 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
ACTB-202ENST00000414620 KRTAP12-4P60329 112 aa4.96□□□□□ -1.62
ACTB-202ENST00000414620 K7ERS5 55 aa4.94□□□□□ -1.62
ACTB-202ENST00000414620 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
ACTB-202ENST00000414620 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
ACTB-202ENST00000414620 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
ACTB-202ENST00000414620 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
ACTB-202ENST00000414620 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
ACTB-202ENST00000414620 MT1AP04731 61 aa4.7□□□□□ -1.66
ACTB-202ENST00000414620 KRTAP6-1Q3LI64 71 aa4.7□□□□□ -1.66
ACTB-202ENST00000414620 KRTAP5-2Q701N4 177 aa4.65□□□□□ -1.67
ACTB-202ENST00000414620 KRTAP4-11Q9BYQ6 195 aa4.64□□□□□ -1.67
ACTB-202ENST00000414620 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
ACTB-202ENST00000414620 ROMO1P60602 79 aa4.59□□□□□ -1.67
ACTB-202ENST00000414620 KRTAP9-6A8MVA2 160 aa4.57□□□□□ -1.68
ACTB-202ENST00000414620 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
ACTB-202ENST00000414620 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
ACTB-202ENST00000414620 KRTAP5-8O75690 187 aa4.5□□□□□ -1.69
ACTB-202ENST00000414620 H3BS24 57 aa4.36□□□□□ -1.71
ACTB-202ENST00000414620 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
ACTB-202ENST00000414620 MT3P25713 68 aa4.28□□□□□ -1.72
ACTB-202ENST00000414620 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
ACTB-202ENST00000414620 MUC5ACP98088 5654 aa4.25□□□□□ -1.73
ACTB-202ENST00000414620 MUC5BQ9HC84 5762 aaPredicted RBP4.24□□□□□ -1.73
ACTB-202ENST00000414620 AHNAKQ09666 5890 aaKnown RBP4.22□□□□□ -1.73
ACTB-202ENST00000414620 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
ACTB-202ENST00000414620 NDUFAF8A1L188 74 aa4.01□□□□□ -1.77
ACTB-202ENST00000414620 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
ACTB-202ENST00000414620 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
ACTB-202ENST00000414620 A0A0A0MQY5 61 aa3.86□□□□□ -1.79
ACTB-202ENST00000414620 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
ACTB-202ENST00000414620 KRTAP4-2Q9BYR5 136 aa3.78□□□□□ -1.8
ACTB-202ENST00000414620 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
ACTB-202ENST00000414620 INE1O15225 51 aa3.54□□□□□ -1.84
ACTB-202ENST00000414620 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
ACTB-202ENST00000414620 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
ACTB-202ENST00000414620 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
ACTB-202ENST00000414620 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
ACTB-202ENST00000414620 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
ACTB-202ENST00000414620 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
ACTB-202ENST00000414620 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
ACTB-202ENST00000414620 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
ACTB-202ENST00000414620 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
ACTB-202ENST00000414620 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.98
ACTB-202ENST00000414620 PRM1P04553 51 aa2.37□□□□□ -2.03
ACTB-202ENST00000414620 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
ACTB-202ENST00000414620 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 72.5 ms