RNA–Protein interactions for RNA: ENST00000414487.6

SNRPE-202, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPE, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-202ENST00000414487 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
SNRPE-202ENST00000414487 MT3P25713 68 aa3.75□□□□□ -1.81
SNRPE-202ENST00000414487 MUC2Q02817 5179 aa3.75□□□□□ -1.81
SNRPE-202ENST00000414487 MT1XP80297 61 aa3.73□□□□□ -1.81
SNRPE-202ENST00000414487 KRTAP10-5P60370 271 aa3.72□□□□□ -1.81
SNRPE-202ENST00000414487 KRTAP8-1Q8IUC2 63 aa3.72□□□□□ -1.81
SNRPE-202ENST00000414487 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.82
SNRPE-202ENST00000414487 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
SNRPE-202ENST00000414487 FAT4Q6V0I7 4981 aa3.66□□□□□ -1.82
SNRPE-202ENST00000414487 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
SNRPE-202ENST00000414487 KRTAP10-12P60413 245 aa3.65□□□□□ -1.83
SNRPE-202ENST00000414487 PRO2289Q9P1D8 64 aa3.63□□□□□ -1.83
SNRPE-202ENST00000414487 KRTAP12-3P60328 96 aa3.6□□□□□ -1.83
SNRPE-202ENST00000414487 CRCT1Q9UGL9 99 aa3.53□□□□□ -1.84
SNRPE-202ENST00000414487 FSIP2Q5CZC0 6907 aa3.51□□□□□ -1.85
SNRPE-202ENST00000414487 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
SNRPE-202ENST00000414487 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
SNRPE-202ENST00000414487 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
SNRPE-202ENST00000414487 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
SNRPE-202ENST00000414487 INE1O15225 51 aa3.35□□□□□ -1.87
SNRPE-202ENST00000414487 KRTAP19-7Q3SYF9 63 aa3.31□□□□□ -1.88
SNRPE-202ENST00000414487 KRTAP19-6Q3LI70 58 aa3.25□□□□□ -1.89
SNRPE-202ENST00000414487 USH2AO75445 5202 aa3.24□□□□□ -1.89
SNRPE-202ENST00000414487 MT1EP04732 61 aa3.24□□□□□ -1.89
SNRPE-202ENST00000414487 MT1LQ93083 61 aa3.24□□□□□ -1.89
SNRPE-202ENST00000414487 SSPOA2VEC9 5147 aa3.21□□□□□ -1.9
SNRPE-202ENST00000414487 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
SNRPE-202ENST00000414487 KRTAP2-3P0C7H8 128 aa3.17□□□□□ -1.9
SNRPE-202ENST00000414487 KRTAP2-4Q9BYR9 128 aa3.17□□□□□ -1.9
SNRPE-202ENST00000414487 KRTAP2-1Q9BYU5 128 aa3.17□□□□□ -1.9
SNRPE-202ENST00000414487 FCGBPQ9Y6R7 5405 aaPredicted RBP3.17□□□□□ -1.9
SNRPE-202ENST00000414487 KRTAP4-3Q9BYR4 195 aa3.15□□□□□ -1.91
SNRPE-202ENST00000414487 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.91
SNRPE-202ENST00000414487 SYNE2Q8WXH0 6885 aaKnown RBP3.11□□□□□ -1.91
SNRPE-202ENST00000414487 MACF1Q9UPN3 7388 aaKnown RBP3.08□□□□□ -1.92
SNRPE-202ENST00000414487 KMT2DO14686 5537 aa3.05□□□□□ -1.92
SNRPE-202ENST00000414487 MT1GP13640 62 aa3.04□□□□□ -1.92
SNRPE-202ENST00000414487 KRTAP19-3Q7Z4W3 81 aa3.04□□□□□ -1.92
SNRPE-202ENST00000414487 MT1MQ8N339 61 aa3.03□□□□□ -1.92
SNRPE-202ENST00000414487 KRTAP6-3Q3LI67 103 aa3.01□□□□□ -1.93
SNRPE-202ENST00000414487 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
SNRPE-202ENST00000414487 NEBP20929 6669 aa2.91□□□□□ -1.94
SNRPE-202ENST00000414487 KRTAP20-1Q3LI63 56 aa2.9□□□□□ -1.95
SNRPE-202ENST00000414487 MUC12Q9UKN1 5478 aa2.9□□□□□ -1.95
SNRPE-202ENST00000414487 SPRR2FQ96RM1 72 aa2.89□□□□□ -1.95
SNRPE-202ENST00000414487 MDN1Q9NU22 5596 aa2.78□□□□□ -1.96
SNRPE-202ENST00000414487 MT1AP04731 61 aa2.76□□□□□ -1.97
SNRPE-202ENST00000414487 KRTAP5-5Q701N2 237 aaPredicted RBP2.76□□□□□ -1.97
SNRPE-202ENST00000414487 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
SNRPE-202ENST00000414487 KRTAP12-4P60329 112 aa2.73□□□□□ -1.97
SNRPE-202ENST00000414487 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
SNRPE-202ENST00000414487 SPRR2EP22531 72 aa2.7□□□□□ -1.98
SNRPE-202ENST00000414487 SPRR2BP35325 72 aa2.7□□□□□ -1.98
SNRPE-202ENST00000414487 SPRR2AP35326 72 aa2.7□□□□□ -1.98
SNRPE-202ENST00000414487 SPRR2DP22532 72 aa2.61□□□□□ -1.99
SNRPE-202ENST00000414487 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
SNRPE-202ENST00000414487 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
SNRPE-202ENST00000414487 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
SNRPE-202ENST00000414487 GPR98Q8WXG9 6306 aa2.51□□□□□ -2.01
SNRPE-202ENST00000414487 SYNE1Q8NF91 8797 aaKnown RBP2.5□□□□□ -2.01
SNRPE-202ENST00000414487 DSTQ03001 7570 aaKnown RBP2.46□□□□□ -2.02
SNRPE-202ENST00000414487 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
SNRPE-202ENST00000414487 PRM1P04553 51 aa2.41□□□□□ -2.02
SNRPE-202ENST00000414487 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
SNRPE-202ENST00000414487 MT4P47944 62 aa2.3□□□□□ -2.04
SNRPE-202ENST00000414487 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
SNRPE-202ENST00000414487 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
SNRPE-202ENST00000414487 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
SNRPE-202ENST00000414487 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
SNRPE-202ENST00000414487 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
SNRPE-202ENST00000414487 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
SNRPE-202ENST00000414487 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
SNRPE-202ENST00000414487 MUC5BQ9HC84 5762 aaPredicted RBP1.9□□□□□ -2.1
SNRPE-202ENST00000414487 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
SNRPE-202ENST00000414487 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
SNRPE-202ENST00000414487 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
SNRPE-202ENST00000414487 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 23.9 ms