RNA–Protein interactions for RNA: ENST00000414160.6

C2CD3-204, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene C2CD3, Length 2,431 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-204ENST00000414160 KRTAP4-8A0A0G2JLE6 195 aa3.63□□□□□ -1.83
C2CD3-204ENST00000414160 KRTAP4-8Q9BYQ9 185 aa3.63□□□□□ -1.83
C2CD3-204ENST00000414160 SSPOA2VEC9 5147 aa3.62□□□□□ -1.83
C2CD3-204ENST00000414160 KRTAP2-3P0C7H8 128 aa3.58□□□□□ -1.84
C2CD3-204ENST00000414160 KRTAP2-4Q9BYR9 128 aa3.58□□□□□ -1.84
C2CD3-204ENST00000414160 KRTAP2-1Q9BYU5 128 aa3.58□□□□□ -1.84
C2CD3-204ENST00000414160 KRTAP4-7Q9BYR0 210 aa3.57□□□□□ -1.84
C2CD3-204ENST00000414160 KRTAP19-7Q3SYF9 63 aa3.54□□□□□ -1.84
C2CD3-204ENST00000414160 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
C2CD3-204ENST00000414160 FCGBPQ9Y6R7 5405 aaPredicted RBP3.49□□□□□ -1.85
C2CD3-204ENST00000414160 MT1LQ93083 61 aa3.44□□□□□ -1.86
C2CD3-204ENST00000414160 LCE1AQ5T7P2 110 aa3.42□□□□□ -1.86
C2CD3-204ENST00000414160 MT1EP04732 61 aa3.41□□□□□ -1.86
C2CD3-204ENST00000414160 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.39□□□□□ -1.87
C2CD3-204ENST00000414160 KRTAP2-2Q9BYT5 123 aa3.38□□□□□ -1.87
C2CD3-204ENST00000414160 MACF1Q9UPN3 7388 aaKnown RBP3.36□□□□□ -1.87
C2CD3-204ENST00000414160 LOC100996750A0A140TA64 210 aa3.32□□□□□ -1.88
C2CD3-204ENST00000414160 KRTAP6-3Q3LI67 103 aa3.31□□□□□ -1.88
C2CD3-204ENST00000414160 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
C2CD3-204ENST00000414160 KRTAP5-9P26371 169 aa3.27□□□□□ -1.89
C2CD3-204ENST00000414160 MT3P25713 68 aa3.26□□□□□ -1.89
C2CD3-204ENST00000414160 MT1GP13640 62 aa3.25□□□□□ -1.89
C2CD3-204ENST00000414160 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
C2CD3-204ENST00000414160 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
C2CD3-204ENST00000414160 SPRR2FQ96RM1 72 aa3.2□□□□□ -1.9
C2CD3-204ENST00000414160 KRTAP4-12Q9BQ66 201 aa3.18□□□□□ -1.9
C2CD3-204ENST00000414160 MT1MQ8N339 61 aa3.17□□□□□ -1.9
C2CD3-204ENST00000414160 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
C2CD3-204ENST00000414160 KRTAP19-3Q7Z4W3 81 aa3.13□□□□□ -1.91
C2CD3-204ENST00000414160 DSTQ03001 7570 aaKnown RBP3.12□□□□□ -1.91
C2CD3-204ENST00000414160 SPRR2EP22531 72 aa3.1□□□□□ -1.91
C2CD3-204ENST00000414160 SPRR2BP35325 72 aa3.1□□□□□ -1.91
C2CD3-204ENST00000414160 SPRR2AP35326 72 aa3.1□□□□□ -1.91
C2CD3-204ENST00000414160 NEBP20929 6669 aa3.1□□□□□ -1.91
C2CD3-204ENST00000414160 KRTAP4-9Q9BYQ8 210 aa3.05□□□□□ -1.92
C2CD3-204ENST00000414160 LCE3BQ5TA77 95 aa3.04□□□□□ -1.92
C2CD3-204ENST00000414160 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
C2CD3-204ENST00000414160 MDN1Q9NU22 5596 aa3.03□□□□□ -1.92
C2CD3-204ENST00000414160 SPRR2DP22532 72 aa3□□□□□ -1.93
C2CD3-204ENST00000414160 LCE1EQ5T753 118 aa3□□□□□ -1.93
C2CD3-204ENST00000414160 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
C2CD3-204ENST00000414160 MT1AP04731 61 aa2.97□□□□□ -1.93
C2CD3-204ENST00000414160 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
C2CD3-204ENST00000414160 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
C2CD3-204ENST00000414160 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
C2CD3-204ENST00000414160 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
C2CD3-204ENST00000414160 PRM1P04553 51 aa2.87□□□□□ -1.95
C2CD3-204ENST00000414160 LCE1DQ5T752 114 aa2.85□□□□□ -1.95
C2CD3-204ENST00000414160 KRTAP4-6Q9BYQ5 205 aa2.85□□□□□ -1.95
C2CD3-204ENST00000414160 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
C2CD3-204ENST00000414160 OBSCNQ5VST9 7968 aa2.7□□□□□ -1.98
C2CD3-204ENST00000414160 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
C2CD3-204ENST00000414160 MT4P47944 62 aa2.57□□□□□ -2
C2CD3-204ENST00000414160 KRTAP4-11Q9BYQ6 195 aa2.56□□□□□ -2
C2CD3-204ENST00000414160 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
C2CD3-204ENST00000414160 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
C2CD3-204ENST00000414160 KRTAP5-3Q6L8H2 238 aa2.42□□□□□ -2.02
C2CD3-204ENST00000414160 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
C2CD3-204ENST00000414160 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
C2CD3-204ENST00000414160 GPR98Q8WXG9 6306 aa2.32□□□□□ -2.04
C2CD3-204ENST00000414160 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
C2CD3-204ENST00000414160 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
C2CD3-204ENST00000414160 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
C2CD3-204ENST00000414160 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
C2CD3-204ENST00000414160 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
C2CD3-204ENST00000414160 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.08
C2CD3-204ENST00000414160 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
C2CD3-204ENST00000414160 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
C2CD3-204ENST00000414160 MUC5BQ9HC84 5762 aaPredicted RBP1.9□□□□□ -2.11
C2CD3-204ENST00000414160 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
C2CD3-204ENST00000414160 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
C2CD3-204ENST00000414160 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.86□□□□□ -2.11
C2CD3-204ENST00000414160 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
C2CD3-204ENST00000414160 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
C2CD3-204ENST00000414160 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
C2CD3-204ENST00000414160 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
C2CD3-204ENST00000414160 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
C2CD3-204ENST00000414160 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 94.8 ms