RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 C10orf95Q9H7T3 257 aa3.6□□□□□ -1.83
HCG18-234ENST00000413358 SPRR2EP22531 72 aa3.59□□□□□ -1.83
HCG18-234ENST00000413358 SPRR2BP35325 72 aa3.59□□□□□ -1.83
HCG18-234ENST00000413358 SPRR2AP35326 72 aa3.59□□□□□ -1.83
HCG18-234ENST00000413358 SPRR2FQ96RM1 72 aa3.59□□□□□ -1.83
HCG18-234ENST00000413358 TNP1P09430 55 aa3.57□□□□□ -1.84
HCG18-234ENST00000413358 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
HCG18-234ENST00000413358 KMT2DO14686 5537 aa3.57□□□□□ -1.84
HCG18-234ENST00000413358 ROMO1P60602 79 aa3.56□□□□□ -1.84
HCG18-234ENST00000413358 KRTAP10-12P60413 245 aa3.54□□□□□ -1.84
HCG18-234ENST00000413358 KTN1-AS1Q86SY8 53 aa3.54□□□□□ -1.84
HCG18-234ENST00000413358 KRTAP8-1Q8IUC2 63 aa3.53□□□□□ -1.84
HCG18-234ENST00000413358 KRTAP2-2Q9BYT5 123 aa3.53□□□□□ -1.84
HCG18-234ENST00000413358 KRTAP2-1Q9BYU5 128 aa3.53□□□□□ -1.84
HCG18-234ENST00000413358 MDN1Q9NU22 5596 aa3.52□□□□□ -1.85
HCG18-234ENST00000413358 KRTAP25-1Q3LHN0 102 aa3.52□□□□□ -1.85
HCG18-234ENST00000413358 SPRR2DP22532 72 aa3.48□□□□□ -1.85
HCG18-234ENST00000413358 LCE1AQ5T7P2 110 aa3.45□□□□□ -1.86
HCG18-234ENST00000413358 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
HCG18-234ENST00000413358 KRTAP23-1A1A580 65 aa3.37□□□□□ -1.87
HCG18-234ENST00000413358 PP632Q6XCG6 107 aa3.37□□□□□ -1.87
HCG18-234ENST00000413358 KRTAP19-5Q3LI72 72 aa3.34□□□□□ -1.87
HCG18-234ENST00000413358 KRTAP19-7Q3SYF9 63 aa3.32□□□□□ -1.88
HCG18-234ENST00000413358 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
HCG18-234ENST00000413358 PRAC1Q96KF2 57 aa3.3□□□□□ -1.88
HCG18-234ENST00000413358 MT1EP04732 61 aa3.29□□□□□ -1.88
HCG18-234ENST00000413358 KRTAP15-1Q3LI76 137 aa3.23□□□□□ -1.89
HCG18-234ENST00000413358 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
HCG18-234ENST00000413358 MT1LQ93083 61 aa3.19□□□□□ -1.9
HCG18-234ENST00000413358 GPR98Q8WXG9 6306 aa3.16□□□□□ -1.9
HCG18-234ENST00000413358 MT1GP13640 62 aa3.14□□□□□ -1.91
HCG18-234ENST00000413358 DSTQ03001 7570 aaKnown RBP3.14□□□□□ -1.91
HCG18-234ENST00000413358 MT1MQ8N339 61 aa3.11□□□□□ -1.91
HCG18-234ENST00000413358 LCE3CQ5T5A8 94 aa3.05□□□□□ -1.92
HCG18-234ENST00000413358 MT4P47944 62 aa3.04□□□□□ -1.92
HCG18-234ENST00000413358 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
HCG18-234ENST00000413358 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
HCG18-234ENST00000413358 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
HCG18-234ENST00000413358 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.95
HCG18-234ENST00000413358 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
HCG18-234ENST00000413358 SPRR5A0A1B0GTR4 108 aa2.86□□□□□ -1.95
HCG18-234ENST00000413358 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
HCG18-234ENST00000413358 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
HCG18-234ENST00000413358 LUZP6Q538Z0 58 aa2.84□□□□□ -1.95
HCG18-234ENST00000413358 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
HCG18-234ENST00000413358 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
HCG18-234ENST00000413358 KRTAP12-4P60329 112 aa2.78□□□□□ -1.96
HCG18-234ENST00000413358 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
HCG18-234ENST00000413358 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
HCG18-234ENST00000413358 MT1AP04731 61 aa2.73□□□□□ -1.97
HCG18-234ENST00000413358 NDUFAF8A1L188 74 aa2.71□□□□□ -1.98
HCG18-234ENST00000413358 KRTAP6-1Q3LI64 71 aa2.69□□□□□ -1.98
HCG18-234ENST00000413358 SYNE1Q8NF91 8797 aaKnown RBP2.6□□□□□ -1.99
HCG18-234ENST00000413358 LCE1EQ5T753 118 aa2.59□□□□□ -1.99
HCG18-234ENST00000413358 A0A0A0MQY5 61 aa2.55□□□□□ -2
HCG18-234ENST00000413358 KRTAP6-2Q3LI66 62 aa2.51□□□□□ -2.01
HCG18-234ENST00000413358 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
HCG18-234ENST00000413358 MT3P25713 68 aa2.49□□□□□ -2.01
HCG18-234ENST00000413358 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
HCG18-234ENST00000413358 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
HCG18-234ENST00000413358 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
HCG18-234ENST00000413358 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
HCG18-234ENST00000413358 INE1O15225 51 aa2.38□□□□□ -2.03
HCG18-234ENST00000413358 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
HCG18-234ENST00000413358 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
HCG18-234ENST00000413358 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
HCG18-234ENST00000413358 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
HCG18-234ENST00000413358 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
HCG18-234ENST00000413358 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
HCG18-234ENST00000413358 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
HCG18-234ENST00000413358 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
HCG18-234ENST00000413358 PRM1P04553 51 aa1.84□□□□□ -2.11
HCG18-234ENST00000413358 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
HCG18-234ENST00000413358 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
HCG18-234ENST00000413358 MUC19Q7Z5P9 8384 aa1.43□□□□□ -2.18
HCG18-234ENST00000413358 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
HCG18-234ENST00000413358 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 145.3 ms