RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-233	ENST00000412685	KRTAP19-3	Q7Z4W3	81 aa		5.48	□□□□□ -1.53
HCG18-233	ENST00000412685	KRTAP2-3	P0C7H8	128 aa		5.47	□□□□□ -1.53
HCG18-233	ENST00000412685	KRTAP2-4	Q9BYR9	128 aa		5.47	□□□□□ -1.53
HCG18-233	ENST00000412685	KRTAP2-1	Q9BYU5	128 aa		5.47	□□□□□ -1.53
HCG18-233	ENST00000412685	MT1G	P13640	62 aa		5.45	□□□□□ -1.54
HCG18-233	ENST00000412685	KRTAP4-3	Q9BYR4	195 aa		5.45	□□□□□ -1.54
HCG18-233	ENST00000412685	MT1M	Q8N339	61 aa		5.44	□□□□□ -1.54
HCG18-233	ENST00000412685	SPRR2F	Q96RM1	72 aa		5.38	□□□□□ -1.55
HCG18-233	ENST00000412685	LOC100996750	A0A140TA64	210 aa		5.37	□□□□□ -1.55
HCG18-233	ENST00000412685	MACF1	Q9UPN3	7388 aa	Known RBP	5.35	□□□□□ -1.55
HCG18-233	ENST00000412685	LCE5A	Q5TCM9	118 aa		5.32	□□□□□ -1.56
HCG18-233	ENST00000412685	KRTAP9-2	Q9BYQ4	174 aa		5.28	□□□□□ -1.56
HCG18-233	ENST00000412685	CRCT1	Q9UGL9	99 aa		5.22	□□□□□ -1.57
HCG18-233	ENST00000412685	SYNE2	Q8WXH0	6885 aa	Known RBP	5.18	□□□□□ -1.58
HCG18-233	ENST00000412685	DST	Q03001	7570 aa	Known RBP	5.17	□□□□□ -1.58
HCG18-233	ENST00000412685	MDN1	Q9NU22	5596 aa		5.11	□□□□□ -1.59
HCG18-233	ENST00000412685	KRTAP5-9	P26371	169 aa		5.1	□□□□□ -1.59
HCG18-233	ENST00000412685	KRTAP9-6	A0A140TA67	174 aa		5.07	□□□□□ -1.6
HCG18-233	ENST00000412685	LCE1A	Q5T7P2	110 aa		5.06	□□□□□ -1.6
HCG18-233	ENST00000412685	SPRR2E	P22531	72 aa		4.95	□□□□□ -1.62
HCG18-233	ENST00000412685	SPRR2B	P35325	72 aa		4.95	□□□□□ -1.62
HCG18-233	ENST00000412685	SPRR2A	P35326	72 aa		4.95	□□□□□ -1.62
HCG18-233	ENST00000412685	LCE3B	Q5TA77	95 aa		4.9	□□□□□ -1.63
HCG18-233	ENST00000412685	KRTAP6-1	Q3LI64	71 aa		4.89	□□□□□ -1.63
HCG18-233	ENST00000412685	MT1A	P04731	61 aa		4.86	□□□□□ -1.63
HCG18-233	ENST00000412685	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.85	□□□□□ -1.63
HCG18-233	ENST00000412685	KRTAP12-4	P60329	112 aa		4.8	□□□□□ -1.64
HCG18-233	ENST00000412685	KRTAP6-3	Q3LI67	103 aa		4.76	□□□□□ -1.65
HCG18-233	ENST00000412685	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.76	□□□□□ -1.65
HCG18-233	ENST00000412685	SPRR2D	P22532	72 aa		4.75	□□□□□ -1.65
HCG18-233	ENST00000412685	KRTAP4-9	Q9BYQ8	210 aa		4.74	□□□□□ -1.65
HCG18-233	ENST00000412685	SYNE1	Q8NF91	8797 aa	Known RBP	4.71	□□□□□ -1.66
HCG18-233	ENST00000412685	KRTAP9-4	Q9BYQ2	154 aa		4.59	□□□□□ -1.67
HCG18-233	ENST00000412685	LCE3D	Q9BYE3	92 aa		4.58	□□□□□ -1.68
HCG18-233	ENST00000412685	OBSCN	Q5VST9	7968 aa		4.56	□□□□□ -1.68
HCG18-233	ENST00000412685	KRTAP9-7	A8MTY7	169 aa		4.51	□□□□□ -1.69
HCG18-233	ENST00000412685	LCE3E	Q5T5B0	92 aa		4.49	□□□□□ -1.69
HCG18-233	ENST00000412685	NEB	P20929	6669 aa		4.45	□□□□□ -1.7
HCG18-233	ENST00000412685	KRTAP6-2	Q3LI66	62 aa		4.42	□□□□□ -1.7
HCG18-233	ENST00000412685	MT3	P25713	68 aa		4.38	□□□□□ -1.71
HCG18-233	ENST00000412685	KRTAP5-4	Q6L8H1	288 aa		4.37	□□□□□ -1.71
HCG18-233	ENST00000412685	PRM1	P04553	51 aa		4.29	□□□□□ -1.72
HCG18-233	ENST00000412685	KRTAP4-6	Q9BYQ5	205 aa		4.19	□□□□□ -1.74
HCG18-233	ENST00000412685	KRTAP2-2	Q9BYT5	123 aa		4.17	□□□□□ -1.74
HCG18-233	ENST00000412685	MT4	P47944	62 aa		4.16	□□□□□ -1.74
HCG18-233	ENST00000412685	LCE4A	Q5TA78	99 aa		4.14	□□□□□ -1.75
HCG18-233	ENST00000412685	KRTAP20-2	Q3LI61	65 aa		4.09	□□□□□ -1.75
HCG18-233	ENST00000412685	KRTAP5-2	Q701N4	177 aa		4.05	□□□□□ -1.76
HCG18-233	ENST00000412685	HMCN1	Q96RW7	5635 aa		4.02	□□□□□ -1.77
HCG18-233	ENST00000412685	KRTAP20-1	Q3LI63	56 aa		3.99	□□□□□ -1.77
HCG18-233	ENST00000412685	LCE1D	Q5T752	114 aa		3.98	□□□□□ -1.77
HCG18-233	ENST00000412685	KRTAP5-3	Q6L8H2	238 aa		3.92	□□□□□ -1.78
HCG18-233	ENST00000412685	LCE1E	Q5T753	118 aa		3.82	□□□□□ -1.8
HCG18-233	ENST00000412685	MUC5AC	P98088	5654 aa		3.67	□□□□□ -1.82
HCG18-233	ENST00000412685	LCE1B	Q5T7P3	118 aa		3.54	□□□□□ -1.84
HCG18-233	ENST00000412685	KRTAP5-10	Q6L8G5	202 aa		3.47	□□□□□ -1.85
HCG18-233	ENST00000412685	KRTAP5-1	Q6L8H4	278 aa		3.46	□□□□□ -1.86
HCG18-233	ENST00000412685	KRTAP4-2	Q9BYR5	136 aa		3.45	□□□□□ -1.86
HCG18-233	ENST00000412685	LCE1C	Q5T751	118 aa		3.44	□□□□□ -1.86
HCG18-233	ENST00000412685	KRTAP4-11	Q9BYQ6	195 aa		3.44	□□□□□ -1.86
HCG18-233	ENST00000412685	GPR98	Q8WXG9	6306 aa		3.35	□□□□□ -1.87
HCG18-233	ENST00000412685	LCE1F	Q5T754	118 aa		3.3	□□□□□ -1.88
HCG18-233	ENST00000412685	KRTAP5-8	O75690	187 aa		3.29	□□□□□ -1.88
HCG18-233	ENST00000412685	AHNAK2	Q8IVF2	5795 aa		3.28	□□□□□ -1.88
HCG18-233	ENST00000412685	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.24	□□□□□ -1.89
HCG18-233	ENST00000412685	KRTAP5-7	Q6L8G8	165 aa		3.23	□□□□□ -1.89
HCG18-233	ENST00000412685	KRTAP21-2	Q3LI59	83 aa		3.17	□□□□□ -1.9
HCG18-233	ENST00000412685	KRTAP9-9	Q9BYP9	154 aa		3.16	□□□□□ -1.9
HCG18-233	ENST00000412685	KRTAP5-11	Q6L8G4	156 aa		2.98	□□□□□ -1.93
HCG18-233	ENST00000412685	KRTAP4-12	Q9BQ66	201 aa		2.98	□□□□□ -1.93
HCG18-233	ENST00000412685	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.91	□□□□□ -1.94
HCG18-233	ENST00000412685	KRTAP4-4	Q9BYR3	166 aa		2.87	□□□□□ -1.95
HCG18-233	ENST00000412685	MUC19	Q7Z5P9	8384 aa		2.85	□□□□□ -1.95
HCG18-233	ENST00000412685	AHNAK	Q09666	5890 aa	Known RBP	2.78	□□□□□ -1.97
HCG18-233	ENST00000412685	KRTAP21-1	Q3LI58	79 aa		2.7	□□□□□ -1.98
HCG18-233	ENST00000412685	PHGR1	C9JFL3	82 aa		2.57	□□□□□ -2
HCG18-233	ENST00000412685	MUC16	Q8WXI7	14507 aa		1.67	□□□□□ -2.14

Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms