RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 CRCT1Q9UGL9 99 aa2.67□□□□□ -1.98
LINC00342-201ENST00000412393 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
LINC00342-201ENST00000412393 FSIP2Q5CZC0 6907 aa2.59□□□□□ -1.99
LINC00342-201ENST00000412393 MT2AP02795 61 aa2.56□□□□□ -2
LINC00342-201ENST00000412393 CRIPTQ9P021 101 aa2.55□□□□□ -2
LINC00342-201ENST00000412393 MT1FP04733 61 aa2.54□□□□□ -2
LINC00342-201ENST00000412393 KRTAP10-10P60014 251 aa2.54□□□□□ -2
LINC00342-201ENST00000412393 CAMK2N1Q7Z7J9 78 aa2.51□□□□□ -2.01
LINC00342-201ENST00000412393 USH2AO75445 5202 aa2.5□□□□□ -2.01
LINC00342-201ENST00000412393 SSPOA2VEC9 5147 aa2.49□□□□□ -2.01
LINC00342-201ENST00000412393 KRTAP13-4Q3LI77 160 aa2.49□□□□□ -2.01
LINC00342-201ENST00000412393 M0QZ58 72 aa2.48□□□□□ -2.01
LINC00342-201ENST00000412393 S4R3F8 94 aa2.47□□□□□ -2.01
LINC00342-201ENST00000412393 KRTAP12-1P59990 96 aa2.46□□□□□ -2.02
LINC00342-201ENST00000412393 FCGBPQ9Y6R7 5405 aaPredicted RBP2.43□□□□□ -2.02
LINC00342-201ENST00000412393 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
LINC00342-201ENST00000412393 KRTAP19-6Q3LI70 58 aa2.43□□□□□ -2.02
LINC00342-201ENST00000412393 PLAC4Q8WY50 150 aa2.4□□□□□ -2.03
LINC00342-201ENST00000412393 C10orf95Q9H7T3 257 aa2.4□□□□□ -2.03
LINC00342-201ENST00000412393 A0A0D9SG42 100 aa2.39□□□□□ -2.03
LINC00342-201ENST00000412393 PP632Q6XCG6 107 aa2.39□□□□□ -2.03
LINC00342-201ENST00000412393 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
LINC00342-201ENST00000412393 MACF1Q9UPN3 7388 aaKnown RBP2.34□□□□□ -2.03
LINC00342-201ENST00000412393 PRO2289Q9P1D8 64 aa2.34□□□□□ -2.03
LINC00342-201ENST00000412393 MT1BP07438 61 aa2.33□□□□□ -2.04
LINC00342-201ENST00000412393 KRTAP19-8Q3LI54 63 aa2.33□□□□□ -2.04
LINC00342-201ENST00000412393 SPRR2GQ9BYE4 73 aa2.33□□□□□ -2.04
LINC00342-201ENST00000412393 KRTAP6-3Q3LI67 103 aa2.32□□□□□ -2.04
LINC00342-201ENST00000412393 SYNE2Q8WXH0 6885 aaKnown RBP2.3□□□□□ -2.04
LINC00342-201ENST00000412393 INE1O15225 51 aa2.29□□□□□ -2.04
LINC00342-201ENST00000412393 SPRR5A0A1B0GTR4 108 aa2.28□□□□□ -2.04
LINC00342-201ENST00000412393 R4GN34 69 aa2.26□□□□□ -2.05
LINC00342-201ENST00000412393 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
LINC00342-201ENST00000412393 NEBP20929 6669 aa2.19□□□□□ -2.06
LINC00342-201ENST00000412393 MUC12Q9UKN1 5478 aa2.18□□□□□ -2.06
LINC00342-201ENST00000412393 MT1XP80297 61 aa2.18□□□□□ -2.06
LINC00342-201ENST00000412393 TNP1P09430 55 aa2.16□□□□□ -2.06
LINC00342-201ENST00000412393 KRTAP20-1Q3LI63 56 aa2.16□□□□□ -2.06
LINC00342-201ENST00000412393 SPRR2FQ96RM1 72 aa2.14□□□□□ -2.07
LINC00342-201ENST00000412393 KRTAP8-1Q8IUC2 63 aa2.13□□□□□ -2.07
LINC00342-201ENST00000412393 KMT2DO14686 5537 aa2.13□□□□□ -2.07
LINC00342-201ENST00000412393 SPRR2EP22531 72 aa2.12□□□□□ -2.07
LINC00342-201ENST00000412393 SPRR2BP35325 72 aa2.12□□□□□ -2.07
LINC00342-201ENST00000412393 SPRR2AP35326 72 aa2.12□□□□□ -2.07
LINC00342-201ENST00000412393 KRTAP2-3P0C7H8 128 aa2.1□□□□□ -2.07
LINC00342-201ENST00000412393 KRTAP2-4Q9BYR9 128 aa2.1□□□□□ -2.07
LINC00342-201ENST00000412393 MDN1Q9NU22 5596 aa2.09□□□□□ -2.07
LINC00342-201ENST00000412393 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
LINC00342-201ENST00000412393 SPRR2DP22532 72 aa2.05□□□□□ -2.08
LINC00342-201ENST00000412393 KRTAP2-1Q9BYU5 128 aa2.03□□□□□ -2.08
LINC00342-201ENST00000412393 HMCN1Q96RW7 5635 aa1.98□□□□□ -2.09
LINC00342-201ENST00000412393 KRTAP19-7Q3SYF9 63 aa1.94□□□□□ -2.1
LINC00342-201ENST00000412393 MT1EP04732 61 aa1.93□□□□□ -2.1
LINC00342-201ENST00000412393 KRTAP19-3Q7Z4W3 81 aa1.92□□□□□ -2.1
LINC00342-201ENST00000412393 KRTAP12-3P60328 96 aa1.9□□□□□ -2.11
LINC00342-201ENST00000412393 KRTAP19-5Q3LI72 72 aa1.9□□□□□ -2.11
LINC00342-201ENST00000412393 MT1GP13640 62 aa1.88□□□□□ -2.11
LINC00342-201ENST00000412393 DSTQ03001 7570 aaKnown RBP1.85□□□□□ -2.11
LINC00342-201ENST00000412393 MT1MQ8N339 61 aa1.84□□□□□ -2.11
LINC00342-201ENST00000412393 MT1LQ93083 61 aa1.84□□□□□ -2.11
LINC00342-201ENST00000412393 MT4P47944 62 aa1.79□□□□□ -2.12
LINC00342-201ENST00000412393 GPR98Q8WXG9 6306 aa1.75□□□□□ -2.13
LINC00342-201ENST00000412393 AHNAK2Q8IVF2 5795 aa1.71□□□□□ -2.14
LINC00342-201ENST00000412393 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
LINC00342-201ENST00000412393 KRTAP20-2Q3LI61 65 aa1.67□□□□□ -2.14
LINC00342-201ENST00000412393 KRTAP12-4P60329 112 aa1.66□□□□□ -2.14
LINC00342-201ENST00000412393 SYNE1Q8NF91 8797 aaKnown RBP1.62□□□□□ -2.15
LINC00342-201ENST00000412393 MT1AP04731 61 aa1.57□□□□□ -2.16
LINC00342-201ENST00000412393 KRTAP6-1Q3LI64 71 aa1.56□□□□□ -2.16
LINC00342-201ENST00000412393 KRTAP6-2Q3LI66 62 aa1.49□□□□□ -2.17
LINC00342-201ENST00000412393 PRM1P04553 51 aa1.39□□□□□ -2.19
LINC00342-201ENST00000412393 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
LINC00342-201ENST00000412393 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
LINC00342-201ENST00000412393 MUC5ACP98088 5654 aa1.37□□□□□ -2.19
LINC00342-201ENST00000412393 PHGR1C9JFL3 82 aa0.99□□□□□ -2.25
LINC00342-201ENST00000412393 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
LINC00342-201ENST00000412393 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 10.3 ms