RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 KRTAP19-7Q3SYF9 63 aa4.97□□□□□ -1.61
HDAC8-210ENST00000412342 PSPHP1O15172 72 aa4.95□□□□□ -1.62
HDAC8-210ENST00000412342 MIR22HGQ0VDD5 57 aa4.94□□□□□ -1.62
HDAC8-210ENST00000412342 MT1EP04732 61 aa4.91□□□□□ -1.62
HDAC8-210ENST00000412342 A0A0A0MQY5 61 aa4.9□□□□□ -1.63
HDAC8-210ENST00000412342 KRTAP2-3P0C7H8 128 aa4.9□□□□□ -1.63
HDAC8-210ENST00000412342 RPS28P62857 69 aaKnown RBP4.9□□□□□ -1.63
HDAC8-210ENST00000412342 KRTAP2-4Q9BYR9 128 aa4.9□□□□□ -1.63
HDAC8-210ENST00000412342 SPRR2DP22532 72 aa4.89□□□□□ -1.63
HDAC8-210ENST00000412342 TNP1P09430 55 aa4.87□□□□□ -1.63
HDAC8-210ENST00000412342 KRTAP19-5Q3LI72 72 aa4.86□□□□□ -1.63
HDAC8-210ENST00000412342 LCE3AQ5TA76 89 aa4.84□□□□□ -1.63
HDAC8-210ENST00000412342 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
HDAC8-210ENST00000412342 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
HDAC8-210ENST00000412342 A6NED7 52 aa4.77□□□□□ -1.65
HDAC8-210ENST00000412342 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
HDAC8-210ENST00000412342 KRTAP2-1Q9BYU5 128 aa4.76□□□□□ -1.65
HDAC8-210ENST00000412342 K7ERS5 55 aa4.75□□□□□ -1.65
HDAC8-210ENST00000412342 MT1LQ93083 61 aa4.72□□□□□ -1.65
HDAC8-210ENST00000412342 MT1GP13640 62 aa4.71□□□□□ -1.66
HDAC8-210ENST00000412342 KRTAP25-1Q3LHN0 102 aa4.71□□□□□ -1.66
HDAC8-210ENST00000412342 MT1MQ8N339 61 aa4.65□□□□□ -1.67
HDAC8-210ENST00000412342 DSTQ03001 7570 aaKnown RBP4.65□□□□□ -1.67
HDAC8-210ENST00000412342 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
HDAC8-210ENST00000412342 PP632Q6XCG6 107 aa4.62□□□□□ -1.67
HDAC8-210ENST00000412342 CDC42SE1Q9NRR8 79 aa4.62□□□□□ -1.67
HDAC8-210ENST00000412342 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
HDAC8-210ENST00000412342 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
HDAC8-210ENST00000412342 ROMO1P60602 79 aa4.52□□□□□ -1.69
HDAC8-210ENST00000412342 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
HDAC8-210ENST00000412342 KRTAP5-4Q6L8H1 288 aa4.35□□□□□ -1.71
HDAC8-210ENST00000412342 LCE3CQ5T5A8 94 aa4.29□□□□□ -1.72
HDAC8-210ENST00000412342 KRTAP5-5Q701N2 237 aaPredicted RBP4.29□□□□□ -1.72
HDAC8-210ENST00000412342 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
HDAC8-210ENST00000412342 HMCN1Q96RW7 5635 aa4.27□□□□□ -1.73
HDAC8-210ENST00000412342 MT4P47944 62 aa4.25□□□□□ -1.73
HDAC8-210ENST00000412342 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
HDAC8-210ENST00000412342 GPR98Q8WXG9 6306 aa4.13□□□□□ -1.75
HDAC8-210ENST00000412342 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
HDAC8-210ENST00000412342 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
HDAC8-210ENST00000412342 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
HDAC8-210ENST00000412342 SPRR5A0A1B0GTR4 108 aa4.06□□□□□ -1.76
HDAC8-210ENST00000412342 AHNAK2Q8IVF2 5795 aa4.06□□□□□ -1.76
HDAC8-210ENST00000412342 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
HDAC8-210ENST00000412342 PMAIP1Q13794 54 aa4.02□□□□□ -1.77
HDAC8-210ENST00000412342 MT1AP04731 61 aa4.01□□□□□ -1.77
HDAC8-210ENST00000412342 KRTAP6-1Q3LI64 71 aa3.98□□□□□ -1.77
HDAC8-210ENST00000412342 KRTAP5-10Q6L8G5 202 aa3.93□□□□□ -1.78
HDAC8-210ENST00000412342 PRO0628Q9UI54 55 aa3.89□□□□□ -1.79
HDAC8-210ENST00000412342 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
HDAC8-210ENST00000412342 KRTAP6-2Q3LI66 62 aa3.75□□□□□ -1.81
HDAC8-210ENST00000412342 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
HDAC8-210ENST00000412342 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
HDAC8-210ENST00000412342 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
HDAC8-210ENST00000412342 MT3P25713 68 aa3.63□□□□□ -1.83
HDAC8-210ENST00000412342 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
HDAC8-210ENST00000412342 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
HDAC8-210ENST00000412342 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
HDAC8-210ENST00000412342 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
HDAC8-210ENST00000412342 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
HDAC8-210ENST00000412342 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
HDAC8-210ENST00000412342 LUZP6Q538Z0 58 aa3.37□□□□□ -1.87
HDAC8-210ENST00000412342 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
HDAC8-210ENST00000412342 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
HDAC8-210ENST00000412342 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
HDAC8-210ENST00000412342 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
HDAC8-210ENST00000412342 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
HDAC8-210ENST00000412342 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
HDAC8-210ENST00000412342 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
HDAC8-210ENST00000412342 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
HDAC8-210ENST00000412342 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
HDAC8-210ENST00000412342 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
HDAC8-210ENST00000412342 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
HDAC8-210ENST00000412342 INE1O15225 51 aa2.34□□□□□ -2.03
HDAC8-210ENST00000412342 PRM1P04553 51 aa2.33□□□□□ -2.04
HDAC8-210ENST00000412342 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
HDAC8-210ENST00000412342 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
HDAC8-210ENST00000412342 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 98.6 ms