RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 MT1GP13640 62 aa8.22□□□□□ -1.09
VRK2-202ENST00000412104 SPRR2FQ96RM1 72 aa8.21□□□□□ -1.09
VRK2-202ENST00000412104 MT1MQ8N339 61 aa8.2□□□□□ -1.1
VRK2-202ENST00000412104 MUC12Q9UKN1 5478 aa8.19□□□□□ -1.1
VRK2-202ENST00000412104 KRTAP4-3Q9BYR4 195 aa8.16□□□□□ -1.1
VRK2-202ENST00000412104 CRCT1Q9UGL9 99 aa8.14□□□□□ -1.11
VRK2-202ENST00000412104 MACF1Q9UPN3 7388 aaKnown RBP8.14□□□□□ -1.11
VRK2-202ENST00000412104 LCE5AQ5TCM9 118 aa8.07□□□□□ -1.12
VRK2-202ENST00000412104 LOC100996750A0A140TA64 210 aa8□□□□□ -1.13
VRK2-202ENST00000412104 KRTAP2-3P0C7H8 128 aa7.99□□□□□ -1.13
VRK2-202ENST00000412104 KRTAP2-4Q9BYR9 128 aa7.99□□□□□ -1.13
VRK2-202ENST00000412104 KRTAP2-1Q9BYU5 128 aa7.99□□□□□ -1.13
VRK2-202ENST00000412104 KRTAP5-9P26371 169 aa7.89□□□□□ -1.15
VRK2-202ENST00000412104 SYNE2Q8WXH0 6885 aaKnown RBP7.84□□□□□ -1.15
VRK2-202ENST00000412104 INE1O15225 51 aa7.82□□□□□ -1.16
VRK2-202ENST00000412104 LCE1AQ5T7P2 110 aa7.76□□□□□ -1.17
VRK2-202ENST00000412104 KRTAP9-6A0A140TA67 174 aa7.74□□□□□ -1.17
VRK2-202ENST00000412104 DSTQ03001 7570 aaKnown RBP7.65□□□□□ -1.19
VRK2-202ENST00000412104 MDN1Q9NU22 5596 aa7.64□□□□□ -1.19
VRK2-202ENST00000412104 SPRR2EP22531 72 aa7.63□□□□□ -1.19
VRK2-202ENST00000412104 SPRR2BP35325 72 aa7.63□□□□□ -1.19
VRK2-202ENST00000412104 SPRR2AP35326 72 aa7.63□□□□□ -1.19
VRK2-202ENST00000412104 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.52□□□□□ -1.2
VRK2-202ENST00000412104 KRTAP6-3Q3LI67 103 aa7.46□□□□□ -1.21
VRK2-202ENST00000412104 KRTAP5-5Q701N2 237 aaPredicted RBP7.33□□□□□ -1.24
VRK2-202ENST00000412104 SPRR2DP22532 72 aa7.33□□□□□ -1.24
VRK2-202ENST00000412104 MT1AP04731 61 aa7.31□□□□□ -1.24
VRK2-202ENST00000412104 KRTAP6-1Q3LI64 71 aa7.31□□□□□ -1.24
VRK2-202ENST00000412104 LCE3BQ5TA77 95 aa7.26□□□□□ -1.25
VRK2-202ENST00000412104 KRTAP9-7A8MTY7 169 aa7.07□□□□□ -1.28
VRK2-202ENST00000412104 KRTAP4-9Q9BYQ8 210 aa6.98□□□□□ -1.29
VRK2-202ENST00000412104 SYNE1Q8NF91 8797 aaKnown RBP6.92□□□□□ -1.3
VRK2-202ENST00000412104 KRTAP12-4P60329 112 aa6.91□□□□□ -1.3
VRK2-202ENST00000412104 KRTAP9-4Q9BYQ2 154 aa6.91□□□□□ -1.3
VRK2-202ENST00000412104 NEBP20929 6669 aa6.85□□□□□ -1.31
VRK2-202ENST00000412104 LCE3DQ9BYE3 92 aa6.72□□□□□ -1.33
VRK2-202ENST00000412104 KRTAP5-4Q6L8H1 288 aa6.72□□□□□ -1.33
VRK2-202ENST00000412104 KRTAP6-2Q3LI66 62 aa6.64□□□□□ -1.35
VRK2-202ENST00000412104 LCE3EQ5T5B0 92 aa6.59□□□□□ -1.35
VRK2-202ENST00000412104 MT3P25713 68 aa6.58□□□□□ -1.36
VRK2-202ENST00000412104 LCE4AQ5TA78 99 aa6.42□□□□□ -1.38
VRK2-202ENST00000412104 KRTAP4-6Q9BYQ5 205 aa6.41□□□□□ -1.38
VRK2-202ENST00000412104 MT4P47944 62 aa6.4□□□□□ -1.38
VRK2-202ENST00000412104 KRTAP2-2Q9BYT5 123 aa6.31□□□□□ -1.4
VRK2-202ENST00000412104 KRTAP20-1Q3LI63 56 aa6.3□□□□□ -1.4
VRK2-202ENST00000412104 KRTAP20-2Q3LI61 65 aa6.29□□□□□ -1.4
VRK2-202ENST00000412104 KRTAP5-2Q701N4 177 aa6.19□□□□□ -1.42
VRK2-202ENST00000412104 LCE1DQ5T752 114 aa6.17□□□□□ -1.42
VRK2-202ENST00000412104 HMCN1Q96RW7 5635 aa6.07□□□□□ -1.44
VRK2-202ENST00000412104 OBSCNQ5VST9 7968 aa6.05□□□□□ -1.44
VRK2-202ENST00000412104 PRM1P04553 51 aa6.05□□□□□ -1.44
VRK2-202ENST00000412104 KRTAP5-3Q6L8H2 238 aa6.02□□□□□ -1.45
VRK2-202ENST00000412104 LCE1EQ5T753 118 aa5.54□□□□□ -1.52
VRK2-202ENST00000412104 MUC5ACP98088 5654 aa5.37□□□□□ -1.55
VRK2-202ENST00000412104 LCE1BQ5T7P3 118 aa5.33□□□□□ -1.56
VRK2-202ENST00000412104 KRTAP4-11Q9BYQ6 195 aa5.31□□□□□ -1.56
VRK2-202ENST00000412104 KRTAP5-1Q6L8H4 278 aa5.3□□□□□ -1.56
VRK2-202ENST00000412104 KRTAP5-10Q6L8G5 202 aa5.27□□□□□ -1.57
VRK2-202ENST00000412104 KRTAP4-2Q9BYR5 136 aa5.23□□□□□ -1.57
VRK2-202ENST00000412104 LCE1CQ5T751 118 aa5.21□□□□□ -1.58
VRK2-202ENST00000412104 GPR98Q8WXG9 6306 aa5.17□□□□□ -1.58
VRK2-202ENST00000412104 KRTAP5-8O75690 187 aa5.11□□□□□ -1.59
VRK2-202ENST00000412104 AHNAK2Q8IVF2 5795 aa5.08□□□□□ -1.6
VRK2-202ENST00000412104 KRTAP5-7Q6L8G8 165 aa5□□□□□ -1.61
VRK2-202ENST00000412104 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.91□□□□□ -1.62
VRK2-202ENST00000412104 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
VRK2-202ENST00000412104 KRTAP21-2Q3LI59 83 aa4.76□□□□□ -1.65
VRK2-202ENST00000412104 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
VRK2-202ENST00000412104 KRTAP5-11Q6L8G4 156 aa4.54□□□□□ -1.68
VRK2-202ENST00000412104 MUC5BQ9HC84 5762 aaPredicted RBP4.33□□□□□ -1.72
VRK2-202ENST00000412104 KRTAP4-4Q9BYR3 166 aa4.27□□□□□ -1.73
VRK2-202ENST00000412104 AHNAKQ09666 5890 aaKnown RBP4.08□□□□□ -1.76
VRK2-202ENST00000412104 PHGR1C9JFL3 82 aa3.91□□□□□ -1.78
VRK2-202ENST00000412104 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
VRK2-202ENST00000412104 KRTAP21-1Q3LI58 79 aa3.76□□□□□ -1.81
VRK2-202ENST00000412104 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
VRK2-202ENST00000412104 MUC16Q8WXI7 14507 aa2.55□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 54.3 ms