RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 LCE5AQ5TCM9 118 aa5.6□□□□□ -1.51
TRAPPC12-203ENST00000411973 ROMO1P60602 79 aa5.54□□□□□ -1.52
TRAPPC12-203ENST00000411973 KRTAP23-1A1A580 65 aa5.53□□□□□ -1.52
TRAPPC12-203ENST00000411973 MT1GP13640 62 aa5.53□□□□□ -1.52
TRAPPC12-203ENST00000411973 KRTAP12-3P60328 96 aa5.52□□□□□ -1.53
TRAPPC12-203ENST00000411973 MT1LQ93083 61 aa5.52□□□□□ -1.53
TRAPPC12-203ENST00000411973 KRTAP2-2Q9BYT5 123 aa5.52□□□□□ -1.53
TRAPPC12-203ENST00000411973 KRTAP2-1Q9BYU5 128 aa5.52□□□□□ -1.53
TRAPPC12-203ENST00000411973 LCE3BQ5TA77 95 aa5.48□□□□□ -1.53
TRAPPC12-203ENST00000411973 PP632Q6XCG6 107 aa5.46□□□□□ -1.54
TRAPPC12-203ENST00000411973 DSTQ03001 7570 aaKnown RBP5.45□□□□□ -1.54
TRAPPC12-203ENST00000411973 MT1MQ8N339 61 aa5.42□□□□□ -1.54
TRAPPC12-203ENST00000411973 BRK1Q8WUW1 75 aa5.38□□□□□ -1.55
TRAPPC12-203ENST00000411973 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
TRAPPC12-203ENST00000411973 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
TRAPPC12-203ENST00000411973 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
TRAPPC12-203ENST00000411973 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
TRAPPC12-203ENST00000411973 GPR98Q8WXG9 6306 aa5.17□□□□□ -1.58
TRAPPC12-203ENST00000411973 LCE3CQ5T5A8 94 aa5.12□□□□□ -1.59
TRAPPC12-203ENST00000411973 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
TRAPPC12-203ENST00000411973 LCE4AQ5TA78 99 aa5.04□□□□□ -1.6
TRAPPC12-203ENST00000411973 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
TRAPPC12-203ENST00000411973 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
TRAPPC12-203ENST00000411973 KRTAP5-5Q701N2 237 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC12-203ENST00000411973 PRO0628Q9UI54 55 aa4.96□□□□□ -1.62
TRAPPC12-203ENST00000411973 LOC100996750A0A140TA64 210 aa4.95□□□□□ -1.62
TRAPPC12-203ENST00000411973 LCE1DQ5T752 114 aa4.94□□□□□ -1.62
TRAPPC12-203ENST00000411973 MT4P47944 62 aa4.91□□□□□ -1.62
TRAPPC12-203ENST00000411973 HMCN1Q96RW7 5635 aa4.87□□□□□ -1.63
TRAPPC12-203ENST00000411973 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
TRAPPC12-203ENST00000411973 KRTAP4-6Q9BYQ5 205 aa4.82□□□□□ -1.64
TRAPPC12-203ENST00000411973 PRAC1Q96KF2 57 aa4.81□□□□□ -1.64
TRAPPC12-203ENST00000411973 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
TRAPPC12-203ENST00000411973 SPRR5A0A1B0GTR4 108 aa4.73□□□□□ -1.65
TRAPPC12-203ENST00000411973 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
TRAPPC12-203ENST00000411973 MT1AP04731 61 aa4.7□□□□□ -1.66
TRAPPC12-203ENST00000411973 KRTAP20-2Q3LI61 65 aa4.69□□□□□ -1.66
TRAPPC12-203ENST00000411973 KTN1-AS1Q86SY8 53 aa4.68□□□□□ -1.66
TRAPPC12-203ENST00000411973 AHNAK2Q8IVF2 5795 aa4.67□□□□□ -1.66
TRAPPC12-203ENST00000411973 KRTAP6-1Q3LI64 71 aa4.64□□□□□ -1.67
TRAPPC12-203ENST00000411973 KRTAP5-10Q6L8G5 202 aa4.61□□□□□ -1.67
TRAPPC12-203ENST00000411973 KRTAP5-3Q6L8H2 238 aa4.56□□□□□ -1.68
TRAPPC12-203ENST00000411973 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
TRAPPC12-203ENST00000411973 KRTAP5-7Q6L8G8 165 aa4.5□□□□□ -1.69
TRAPPC12-203ENST00000411973 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
TRAPPC12-203ENST00000411973 SVIPQ8NHG7 77 aa4.4□□□□□ -1.71
TRAPPC12-203ENST00000411973 KRTAP6-2Q3LI66 62 aa4.38□□□□□ -1.71
TRAPPC12-203ENST00000411973 MT3P25713 68 aa4.29□□□□□ -1.72
TRAPPC12-203ENST00000411973 KRTAP4-11Q9BYQ6 195 aa4.22□□□□□ -1.73
TRAPPC12-203ENST00000411973 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
TRAPPC12-203ENST00000411973 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
TRAPPC12-203ENST00000411973 LUZP6Q538Z0 58 aa4.03□□□□□ -1.76
TRAPPC12-203ENST00000411973 AHNAKQ09666 5890 aaKnown RBP3.99□□□□□ -1.77
TRAPPC12-203ENST00000411973 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
TRAPPC12-203ENST00000411973 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
TRAPPC12-203ENST00000411973 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC12-203ENST00000411973 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
TRAPPC12-203ENST00000411973 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
TRAPPC12-203ENST00000411973 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
TRAPPC12-203ENST00000411973 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
TRAPPC12-203ENST00000411973 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
TRAPPC12-203ENST00000411973 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
TRAPPC12-203ENST00000411973 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
TRAPPC12-203ENST00000411973 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
TRAPPC12-203ENST00000411973 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC12-203ENST00000411973 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
TRAPPC12-203ENST00000411973 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
TRAPPC12-203ENST00000411973 H3BS24 57 aa3.1□□□□□ -1.91
TRAPPC12-203ENST00000411973 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
TRAPPC12-203ENST00000411973 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
TRAPPC12-203ENST00000411973 A0A0A0MQY5 61 aa2.91□□□□□ -1.94
TRAPPC12-203ENST00000411973 INE1O15225 51 aa2.89□□□□□ -1.95
TRAPPC12-203ENST00000411973 PRM1P04553 51 aa2.84□□□□□ -1.95
TRAPPC12-203ENST00000411973 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
TRAPPC12-203ENST00000411973 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
TRAPPC12-203ENST00000411973 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
TRAPPC12-203ENST00000411973 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
TRAPPC12-203ENST00000411973 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 6.8 ms