RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 SPRR2GQ9BYE4 73 aa1.48□□□□□ -2.17
RNU6-55P-201ENST00000411092 KIAA1109Q2LD37 5005 aa1.46□□□□□ -2.18
RNU6-55P-201ENST00000411092 INE1O15225 51 aa1.45□□□□□ -2.18
RNU6-55P-201ENST00000411092 RYR3Q15413 4870 aa1.45□□□□□ -2.18
RNU6-55P-201ENST00000411092 FLGP20930 4061 aaPredicted RBP1.45□□□□□ -2.18
RNU6-55P-201ENST00000411092 MUC17Q685J3 4493 aa1.44□□□□□ -2.18
RNU6-55P-201ENST00000411092 KRTAP8-1Q8IUC2 63 aa1.43□□□□□ -2.18
RNU6-55P-201ENST00000411092 PRO2289Q9P1D8 64 aa1.43□□□□□ -2.18
RNU6-55P-201ENST00000411092 LPAP08519 4548 aa1.43□□□□□ -2.18
RNU6-55P-201ENST00000411092 KRTAP19-8Q3LI54 63 aa1.41□□□□□ -2.18
RNU6-55P-201ENST00000411092 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
RNU6-55P-201ENST00000411092 ABCA13Q86UQ4 5058 aa1.39□□□□□ -2.19
RNU6-55P-201ENST00000411092 M0R2T5 61 aa1.38□□□□□ -2.19
RNU6-55P-201ENST00000411092 MT2AP02795 61 aa1.37□□□□□ -2.19
RNU6-55P-201ENST00000411092 KRTAP12-3P60328 96 aa1.37□□□□□ -2.19
RNU6-55P-201ENST00000411092 MT1HP80294 61 aa1.37□□□□□ -2.19
RNU6-55P-201ENST00000411092 HERC1Q15751 4861 aa1.37□□□□□ -2.19
RNU6-55P-201ENST00000411092 BIRC6Q9NR09 4857 aa1.36□□□□□ -2.19
RNU6-55P-201ENST00000411092 MT1FP04733 61 aa1.36□□□□□ -2.19
RNU6-55P-201ENST00000411092 MT1XP80297 61 aa1.35□□□□□ -2.19
RNU6-55P-201ENST00000411092 EPPK1P58107 5090 aaKnown RBP1.34□□□□□ -2.19
RNU6-55P-201ENST00000411092 MT1BP07438 61 aa1.33□□□□□ -2.2
RNU6-55P-201ENST00000411092 HERC2O95714 4834 aa1.32□□□□□ -2.2
RNU6-55P-201ENST00000411092 MUC2Q02817 5179 aa1.27□□□□□ -2.21
RNU6-55P-201ENST00000411092 PCLOQ9Y6V0 5065 aa1.27□□□□□ -2.21
RNU6-55P-201ENST00000411092 HMCN2Q8NDA2 5059 aa1.26□□□□□ -2.21
RNU6-55P-201ENST00000411092 KRTAP19-5Q3LI72 72 aa1.26□□□□□ -2.21
RNU6-55P-201ENST00000411092 KRTAP2-3P0C7H8 128 aa1.24□□□□□ -2.21
RNU6-55P-201ENST00000411092 KRTAP2-4Q9BYR9 128 aa1.24□□□□□ -2.21
RNU6-55P-201ENST00000411092 KRTAP2-1Q9BYU5 128 aa1.24□□□□□ -2.21
RNU6-55P-201ENST00000411092 KRTAP12-4P60329 112 aa1.23□□□□□ -2.21
RNU6-55P-201ENST00000411092 RNF213Q63HN8 5207 aa1.21□□□□□ -2.22
RNU6-55P-201ENST00000411092 KRTAP19-7Q3SYF9 63 aa1.2□□□□□ -2.22
RNU6-55P-201ENST00000411092 FAT4Q6V0I7 4981 aa1.2□□□□□ -2.22
RNU6-55P-201ENST00000411092 CRCT1Q9UGL9 99 aa1.19□□□□□ -2.22
RNU6-55P-201ENST00000411092 UBR4Q5T4S7 5183 aa1.19□□□□□ -2.22
RNU6-55P-201ENST00000411092 MT1LQ93083 61 aa1.18□□□□□ -2.22
RNU6-55P-201ENST00000411092 MT1EP04732 61 aa1.17□□□□□ -2.22
RNU6-55P-201ENST00000411092 KRTAP19-6Q3LI70 58 aa1.12□□□□□ -2.23
RNU6-55P-201ENST00000411092 MT1GP13640 62 aa1.11□□□□□ -2.23
RNU6-55P-201ENST00000411092 KRTAP19-3Q7Z4W3 81 aa1.1□□□□□ -2.23
RNU6-55P-201ENST00000411092 MT1MQ8N339 61 aa1.09□□□□□ -2.23
RNU6-55P-201ENST00000411092 MT1AP04731 61 aa1.08□□□□□ -2.24
RNU6-55P-201ENST00000411092 FCGBPQ9Y6R7 5405 aaPredicted RBP1.07□□□□□ -2.24
RNU6-55P-201ENST00000411092 USH2AO75445 5202 aa1.06□□□□□ -2.24
RNU6-55P-201ENST00000411092 KRTAP6-3Q3LI67 103 aa1.04□□□□□ -2.24
RNU6-55P-201ENST00000411092 SSPOA2VEC9 5147 aa1.03□□□□□ -2.24
RNU6-55P-201ENST00000411092 KMT2DO14686 5537 aa1.01□□□□□ -2.25
RNU6-55P-201ENST00000411092 SPRR2FQ96RM1 72 aa0.99□□□□□ -2.25
RNU6-55P-201ENST00000411092 KRTAP6-1Q3LI64 71 aa0.97□□□□□ -2.25
RNU6-55P-201ENST00000411092 PRM1P04553 51 aa0.94□□□□□ -2.26
RNU6-55P-201ENST00000411092 SPRR2AP35326 72 aa0.93□□□□□ -2.26
RNU6-55P-201ENST00000411092 KRTAP6-2Q3LI66 62 aa0.91□□□□□ -2.26
RNU6-55P-201ENST00000411092 SPRR2EP22531 72 aa0.89□□□□□ -2.27
RNU6-55P-201ENST00000411092 SPRR2BP35325 72 aa0.89□□□□□ -2.27
RNU6-55P-201ENST00000411092 MUC12Q9UKN1 5478 aa0.88□□□□□ -2.27
RNU6-55P-201ENST00000411092 SPRR2DP22532 72 aa0.86□□□□□ -2.27
RNU6-55P-201ENST00000411092 SYNE1Q8NF91 8797 aaKnown RBP0.81□□□□□ -2.28
RNU6-55P-201ENST00000411092 HMCN1Q96RW7 5635 aa0.8□□□□□ -2.28
RNU6-55P-201ENST00000411092 DSTQ03001 7570 aaKnown RBP0.8□□□□□ -2.28
RNU6-55P-201ENST00000411092 FSIP2Q5CZC0 6907 aa0.8□□□□□ -2.28
RNU6-55P-201ENST00000411092 MACF1Q9UPN3 7388 aaKnown RBP0.78□□□□□ -2.29
RNU6-55P-201ENST00000411092 MDN1Q9NU22 5596 aa0.77□□□□□ -2.29
RNU6-55P-201ENST00000411092 KRTAP20-2Q3LI61 65 aa0.76□□□□□ -2.29
RNU6-55P-201ENST00000411092 SYNE2Q8WXH0 6885 aaKnown RBP0.75□□□□□ -2.29
RNU6-55P-201ENST00000411092 KRTAP20-1Q3LI63 56 aa0.74□□□□□ -2.29
RNU6-55P-201ENST00000411092 KRTAP5-10Q6L8G5 202 aa0.72□□□□□ -2.29
RNU6-55P-201ENST00000411092 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
RNU6-55P-201ENST00000411092 MT4P47944 62 aa0.7□□□□□ -2.3
RNU6-55P-201ENST00000411092 MUC5ACP98088 5654 aa0.67□□□□□ -2.3
RNU6-55P-201ENST00000411092 NEBP20929 6669 aa0.65□□□□□ -2.31
RNU6-55P-201ENST00000411092 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
RNU6-55P-201ENST00000411092 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
RNU6-55P-201ENST00000411092 MUC5BQ9HC84 5762 aaPredicted RBP0.5□□□□□ -2.33
RNU6-55P-201ENST00000411092 AHNAK2Q8IVF2 5795 aa0.45□□□□□ -2.34
RNU6-55P-201ENST00000411092 GPR98Q8WXG9 6306 aa0.37□□□□□ -2.35
RNU6-55P-201ENST00000411092 AHNAKQ09666 5890 aaKnown RBP0.31□□□□□ -2.36
Retrieved 77 of 20,778 RNA–protein pairs in 460.9 ms