RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 MT1LQ93083 61 aa5.71□□□□□ -1.5
PDK1-203ENST00000410055 KRTAP4-3Q9BYR4 195 aa5.61□□□□□ -1.51
PDK1-203ENST00000410055 KRTAP19-6Q3LI70 58 aa5.6□□□□□ -1.51
PDK1-203ENST00000410055 CRCT1Q9UGL9 99 aa5.58□□□□□ -1.52
PDK1-203ENST00000410055 LOC100996750A0A140TA64 210 aa5.56□□□□□ -1.52
PDK1-203ENST00000410055 KRTAP12-4P60329 112 aa5.49□□□□□ -1.53
PDK1-203ENST00000410055 MT1GP13640 62 aa5.48□□□□□ -1.53
PDK1-203ENST00000410055 LCE2DQ5TA82 110 aaPredicted RBP5.46□□□□□ -1.53
PDK1-203ENST00000410055 SYNE1Q8NF91 8797 aaKnown RBP5.45□□□□□ -1.54
PDK1-203ENST00000410055 MACF1Q9UPN3 7388 aaKnown RBP5.4□□□□□ -1.55
PDK1-203ENST00000410055 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
PDK1-203ENST00000410055 SYNE2Q8WXH0 6885 aaKnown RBP5.37□□□□□ -1.55
PDK1-203ENST00000410055 KRTAP19-3Q7Z4W3 81 aa5.36□□□□□ -1.55
PDK1-203ENST00000410055 MT1MQ8N339 61 aa5.36□□□□□ -1.55
PDK1-203ENST00000410055 SPRR2FQ96RM1 72 aa5.35□□□□□ -1.55
PDK1-203ENST00000410055 OBSCNQ5VST9 7968 aa5.34□□□□□ -1.55
PDK1-203ENST00000410055 MDN1Q9NU22 5596 aa5.22□□□□□ -1.57
PDK1-203ENST00000410055 LCE5AQ5TCM9 118 aa5.14□□□□□ -1.59
PDK1-203ENST00000410055 LCE3BQ5TA77 95 aa5.09□□□□□ -1.6
PDK1-203ENST00000410055 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
PDK1-203ENST00000410055 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
PDK1-203ENST00000410055 LCE1AQ5T7P2 110 aa5.01□□□□□ -1.61
PDK1-203ENST00000410055 KRTAP9-7A8MTY7 169 aa5.01□□□□□ -1.61
PDK1-203ENST00000410055 PRM1P04553 51 aa4.99□□□□□ -1.61
PDK1-203ENST00000410055 KRTAP9-2Q9BYQ4 174 aa4.94□□□□□ -1.62
PDK1-203ENST00000410055 KRTAP2-2Q9BYT5 123 aa4.93□□□□□ -1.62
PDK1-203ENST00000410055 KRTAP9-6A0A140TA67 174 aa4.92□□□□□ -1.62
PDK1-203ENST00000410055 KRTAP6-1Q3LI64 71 aa4.91□□□□□ -1.62
PDK1-203ENST00000410055 SPRR2EP22531 72 aa4.84□□□□□ -1.63
PDK1-203ENST00000410055 SPRR2BP35325 72 aa4.84□□□□□ -1.63
PDK1-203ENST00000410055 SPRR2AP35326 72 aa4.84□□□□□ -1.63
PDK1-203ENST00000410055 LCE1EQ5T753 118 aa4.8□□□□□ -1.64
PDK1-203ENST00000410055 KRTAP5-5Q701N2 237 aaPredicted RBP4.77□□□□□ -1.65
PDK1-203ENST00000410055 MT1AP04731 61 aa4.75□□□□□ -1.65
PDK1-203ENST00000410055 KRTAP5-9P26371 169 aa4.71□□□□□ -1.65
PDK1-203ENST00000410055 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
PDK1-203ENST00000410055 LCE3EQ5T5B0 92 aa4.66□□□□□ -1.66
PDK1-203ENST00000410055 SPRR2DP22532 72 aa4.61□□□□□ -1.67
PDK1-203ENST00000410055 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
PDK1-203ENST00000410055 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
PDK1-203ENST00000410055 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
PDK1-203ENST00000410055 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
PDK1-203ENST00000410055 MT3P25713 68 aa4.31□□□□□ -1.72
PDK1-203ENST00000410055 MT4P47944 62 aa4.19□□□□□ -1.74
PDK1-203ENST00000410055 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.75
PDK1-203ENST00000410055 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
PDK1-203ENST00000410055 NEBP20929 6669 aa4.05□□□□□ -1.76
PDK1-203ENST00000410055 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
PDK1-203ENST00000410055 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
PDK1-203ENST00000410055 MUC19Q7Z5P9 8384 aa3.93□□□□□ -1.78
PDK1-203ENST00000410055 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
PDK1-203ENST00000410055 LCE4AQ5TA78 99 aa3.83□□□□□ -1.8
PDK1-203ENST00000410055 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
PDK1-203ENST00000410055 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
PDK1-203ENST00000410055 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
PDK1-203ENST00000410055 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
PDK1-203ENST00000410055 KRTAP5-3Q6L8H2 238 aa3.66□□□□□ -1.82
PDK1-203ENST00000410055 KRTAP20-1Q3LI63 56 aa3.64□□□□□ -1.83
PDK1-203ENST00000410055 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
PDK1-203ENST00000410055 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
PDK1-203ENST00000410055 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
PDK1-203ENST00000410055 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
PDK1-203ENST00000410055 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
PDK1-203ENST00000410055 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
PDK1-203ENST00000410055 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
PDK1-203ENST00000410055 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
PDK1-203ENST00000410055 KRTAP5-8O75690 187 aa3.08□□□□□ -1.92
PDK1-203ENST00000410055 KRTAP21-1Q3LI58 79 aa3.06□□□□□ -1.92
PDK1-203ENST00000410055 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
PDK1-203ENST00000410055 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
PDK1-203ENST00000410055 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
PDK1-203ENST00000410055 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
PDK1-203ENST00000410055 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
PDK1-203ENST00000410055 KRTAP9-9Q9BYP9 154 aa2.67□□□□□ -1.98
PDK1-203ENST00000410055 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
PDK1-203ENST00000410055 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
PDK1-203ENST00000410055 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 9.3 ms