RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
CLK1-203ENST00000409769 KRTAP13-4Q3LI77 160 aa1.73□□□□□ -2.13
CLK1-203ENST00000409769 Q5VV11 94 aa1.73□□□□□ -2.13
CLK1-203ENST00000409769 M0QZ58 72 aa1.72□□□□□ -2.13
CLK1-203ENST00000409769 PSPHP1O15172 72 aa1.72□□□□□ -2.13
CLK1-203ENST00000409769 PRR15LQ9BU68 103 aa1.72□□□□□ -2.13
CLK1-203ENST00000409769 A0A1B0GU33 70 aa1.71□□□□□ -2.14
CLK1-203ENST00000409769 KRTAP19-8Q3LI54 63 aa1.71□□□□□ -2.14
CLK1-203ENST00000409769 MT1BP07438 61 aa1.7□□□□□ -2.14
CLK1-203ENST00000409769 SPATA8Q6RVD6 105 aa1.7□□□□□ -2.14
CLK1-203ENST00000409769 R4GN34 69 aa1.7□□□□□ -2.14
CLK1-203ENST00000409769 UQCR11O14957 56 aa1.69□□□□□ -2.14
CLK1-203ENST00000409769 FSIP2Q5CZC0 6907 aa1.69□□□□□ -2.14
CLK1-203ENST00000409769 FCGBPQ9Y6R7 5405 aaPredicted RBP1.68□□□□□ -2.14
CLK1-203ENST00000409769 A6NN06 94 aa1.68□□□□□ -2.14
CLK1-203ENST00000409769 SSPOA2VEC9 5147 aa1.67□□□□□ -2.14
CLK1-203ENST00000409769 USH2AO75445 5202 aa1.67□□□□□ -2.14
CLK1-203ENST00000409769 MIR22HGQ0VDD5 57 aa1.66□□□□□ -2.14
CLK1-203ENST00000409769 A0A0D9SG42 100 aa1.65□□□□□ -2.15
CLK1-203ENST00000409769 A6NED7 52 aa1.65□□□□□ -2.15
CLK1-203ENST00000409769 KRTAP12-1P59990 96 aa1.65□□□□□ -2.15
CLK1-203ENST00000409769 LINC01554Q52M75 96 aa1.65□□□□□ -2.15
CLK1-203ENST00000409769 CDC42SE1Q9NRR8 79 aa1.65□□□□□ -2.15
CLK1-203ENST00000409769 KRTAP19-6Q3LI70 58 aa1.63□□□□□ -2.15
CLK1-203ENST00000409769 MT1XP80297 61 aa1.62□□□□□ -2.15
CLK1-203ENST00000409769 PLAC4Q8WY50 150 aa1.62□□□□□ -2.15
CLK1-203ENST00000409769 BRK1Q8WUW1 75 aa1.59□□□□□ -2.15
CLK1-203ENST00000409769 SYNE2Q8WXH0 6885 aaKnown RBP1.57□□□□□ -2.16
CLK1-203ENST00000409769 K7ERS5 55 aa1.57□□□□□ -2.16
CLK1-203ENST00000409769 C10orf95Q9H7T3 257 aa1.57□□□□□ -2.16
CLK1-203ENST00000409769 PRO2289Q9P1D8 64 aa1.57□□□□□ -2.16
CLK1-203ENST00000409769 MACF1Q9UPN3 7388 aaKnown RBP1.55□□□□□ -2.16
CLK1-203ENST00000409769 KRTAP25-1Q3LHN0 102 aa1.55□□□□□ -2.16
CLK1-203ENST00000409769 PRO0628Q9UI54 55 aa1.54□□□□□ -2.16
CLK1-203ENST00000409769 ROMO1P60602 79 aa1.53□□□□□ -2.16
CLK1-203ENST00000409769 TNP1P09430 55 aa1.51□□□□□ -2.17
CLK1-203ENST00000409769 PMAIP1Q13794 54 aa1.5□□□□□ -2.17
CLK1-203ENST00000409769 KMT2DO14686 5537 aa1.49□□□□□ -2.17
CLK1-203ENST00000409769 KRTAP8-1Q8IUC2 63 aa1.46□□□□□ -2.18
CLK1-203ENST00000409769 KRTAP19-7Q3SYF9 63 aa1.45□□□□□ -2.18
CLK1-203ENST00000409769 NEBP20929 6669 aa1.44□□□□□ -2.18
CLK1-203ENST00000409769 KTN1-AS1Q86SY8 53 aa1.44□□□□□ -2.18
CLK1-203ENST00000409769 KRTAP19-5Q3LI72 72 aa1.43□□□□□ -2.18
CLK1-203ENST00000409769 MT1EP04732 61 aa1.42□□□□□ -2.18
CLK1-203ENST00000409769 SPRR2FQ96RM1 72 aa1.41□□□□□ -2.18
CLK1-203ENST00000409769 MUC12Q9UKN1 5478 aa1.4□□□□□ -2.19
CLK1-203ENST00000409769 MT1LQ93083 61 aa1.38□□□□□ -2.19
CLK1-203ENST00000409769 KRTAP19-3Q7Z4W3 81 aa1.37□□□□□ -2.19
CLK1-203ENST00000409769 MT1GP13640 62 aa1.36□□□□□ -2.19
CLK1-203ENST00000409769 SPRR2EP22531 72 aa1.36□□□□□ -2.19
CLK1-203ENST00000409769 SPRR2BP35325 72 aa1.36□□□□□ -2.19
CLK1-203ENST00000409769 SPRR2AP35326 72 aa1.36□□□□□ -2.19
CLK1-203ENST00000409769 MT1MQ8N339 61 aa1.34□□□□□ -2.19
CLK1-203ENST00000409769 MDN1Q9NU22 5596 aa1.32□□□□□ -2.2
CLK1-203ENST00000409769 SPRR2DP22532 72 aa1.31□□□□□ -2.2
CLK1-203ENST00000409769 DSTQ03001 7570 aaKnown RBP1.27□□□□□ -2.21
CLK1-203ENST00000409769 KRTAP2-3P0C7H8 128 aa1.26□□□□□ -2.21
CLK1-203ENST00000409769 KRTAP2-4Q9BYR9 128 aa1.26□□□□□ -2.21
CLK1-203ENST00000409769 KRTAP20-1Q3LI63 56 aa1.25□□□□□ -2.21
CLK1-203ENST00000409769 KRTAP2-1Q9BYU5 128 aa1.23□□□□□ -2.21
CLK1-203ENST00000409769 SYNE1Q8NF91 8797 aaKnown RBP1.2□□□□□ -2.22
CLK1-203ENST00000409769 MT1AP04731 61 aa1.18□□□□□ -2.22
CLK1-203ENST00000409769 KRTAP6-1Q3LI64 71 aa1.16□□□□□ -2.22
CLK1-203ENST00000409769 MT4P47944 62 aa1.12□□□□□ -2.23
CLK1-203ENST00000409769 KRTAP20-2Q3LI61 65 aa1.11□□□□□ -2.23
CLK1-203ENST00000409769 KRTAP5-10Q6L8G5 202 aa1.09□□□□□ -2.23
CLK1-203ENST00000409769 KRTAP6-2Q3LI66 62 aa1.07□□□□□ -2.24
CLK1-203ENST00000409769 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
CLK1-203ENST00000409769 AHNAK2Q8IVF2 5795 aa1.01□□□□□ -2.25
CLK1-203ENST00000409769 INE1O15225 51 aa1.01□□□□□ -2.25
CLK1-203ENST00000409769 GPR98Q8WXG9 6306 aa0.98□□□□□ -2.25
CLK1-203ENST00000409769 MUC5ACP98088 5654 aa0.9□□□□□ -2.27
CLK1-203ENST00000409769 MUC5BQ9HC84 5762 aaPredicted RBP0.81□□□□□ -2.28
CLK1-203ENST00000409769 PRM1P04553 51 aa0.79□□□□□ -2.28
CLK1-203ENST00000409769 AHNAKQ09666 5890 aaKnown RBP0.77□□□□□ -2.29
CLK1-203ENST00000409769 PHGR1C9JFL3 82 aa0.67□□□□□ -2.3
CLK1-203ENST00000409769 KRTAP21-1Q3LI58 79 aa0.49□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms