RNA–Protein interactions for RNA: ENST00000409681.1

POLR1A-203, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5 BASIC

Gene POLR1A, Length 6,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-203ENST00000409681 KRTAP9-7A8MTY7 169 aa3.41□□□□□ -1.86
POLR1A-203ENST00000409681 KRTAP6-3Q3LI67 103 aa3.4□□□□□ -1.87
POLR1A-203ENST00000409681 LCE3BQ5TA77 95 aa3.36□□□□□ -1.87
POLR1A-203ENST00000409681 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.33□□□□□ -1.88
POLR1A-203ENST00000409681 MT1MQ8N339 61 aa3.33□□□□□ -1.88
POLR1A-203ENST00000409681 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
POLR1A-203ENST00000409681 KRTAP20-1Q3LI63 56 aa3.31□□□□□ -1.88
POLR1A-203ENST00000409681 LCE1AQ5T7P2 110 aa3.29□□□□□ -1.88
POLR1A-203ENST00000409681 FSIP2Q5CZC0 6907 aa3.28□□□□□ -1.88
POLR1A-203ENST00000409681 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
POLR1A-203ENST00000409681 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
POLR1A-203ENST00000409681 KRTAP19-7Q3SYF9 63 aa3.23□□□□□ -1.89
POLR1A-203ENST00000409681 KRTAP4-7Q9BYR0 210 aa3.21□□□□□ -1.9
POLR1A-203ENST00000409681 MT4P47944 62 aa3.2□□□□□ -1.9
POLR1A-203ENST00000409681 MT3P25713 68 aa3.15□□□□□ -1.9
POLR1A-203ENST00000409681 SYNE2Q8WXH0 6885 aaKnown RBP3.13□□□□□ -1.91
POLR1A-203ENST00000409681 MUC2Q02817 5179 aa3.12□□□□□ -1.91
POLR1A-203ENST00000409681 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
POLR1A-203ENST00000409681 KRTAP2-2Q9BYT5 123 aa3.12□□□□□ -1.91
POLR1A-203ENST00000409681 KRTAP2-1Q9BYU5 128 aa3.12□□□□□ -1.91
POLR1A-203ENST00000409681 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
POLR1A-203ENST00000409681 MT1AP04731 61 aa3.08□□□□□ -1.92
POLR1A-203ENST00000409681 LCE4AQ5TA78 99 aa3.07□□□□□ -1.92
POLR1A-203ENST00000409681 LCE5AQ5TCM9 118 aa3.07□□□□□ -1.92
POLR1A-203ENST00000409681 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
POLR1A-203ENST00000409681 USH2AO75445 5202 aa3.05□□□□□ -1.92
POLR1A-203ENST00000409681 LOC100996750A0A140TA64 210 aa3.03□□□□□ -1.92
POLR1A-203ENST00000409681 KRTAP5-9P26371 169 aa2.98□□□□□ -1.93
POLR1A-203ENST00000409681 SSPOA2VEC9 5147 aa2.92□□□□□ -1.94
POLR1A-203ENST00000409681 LCE1DQ5T752 114 aa2.88□□□□□ -1.95
POLR1A-203ENST00000409681 KRTAP4-9Q9BYQ8 210 aa2.87□□□□□ -1.95
POLR1A-203ENST00000409681 NEBP20929 6669 aa2.86□□□□□ -1.95
POLR1A-203ENST00000409681 KRTAP9-4Q9BYQ2 154 aa2.85□□□□□ -1.95
POLR1A-203ENST00000409681 FCGBPQ9Y6R7 5405 aaPredicted RBP2.85□□□□□ -1.95
POLR1A-203ENST00000409681 SYNE1Q8NF91 8797 aaKnown RBP2.85□□□□□ -1.95
POLR1A-203ENST00000409681 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
POLR1A-203ENST00000409681 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
POLR1A-203ENST00000409681 MACF1Q9UPN3 7388 aaKnown RBP2.81□□□□□ -1.96
POLR1A-203ENST00000409681 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
POLR1A-203ENST00000409681 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
POLR1A-203ENST00000409681 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
POLR1A-203ENST00000409681 PRM1P04553 51 aa2.63□□□□□ -1.99
POLR1A-203ENST00000409681 KMT2DO14686 5537 aa2.63□□□□□ -1.99
POLR1A-203ENST00000409681 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
POLR1A-203ENST00000409681 KRTAP9-9Q9BYP9 154 aa2.56□□□□□ -2
POLR1A-203ENST00000409681 KRTAP4-6Q9BYQ5 205 aa2.54□□□□□ -2
POLR1A-203ENST00000409681 MDN1Q9NU22 5596 aa2.54□□□□□ -2
POLR1A-203ENST00000409681 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
POLR1A-203ENST00000409681 MUC12Q9UKN1 5478 aa2.5□□□□□ -2.01
POLR1A-203ENST00000409681 DSTQ03001 7570 aaKnown RBP2.5□□□□□ -2.01
POLR1A-203ENST00000409681 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
POLR1A-203ENST00000409681 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
POLR1A-203ENST00000409681 LCE1EQ5T753 118 aa2.4□□□□□ -2.03
POLR1A-203ENST00000409681 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
POLR1A-203ENST00000409681 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
POLR1A-203ENST00000409681 KRTAP4-11Q9BYQ6 195 aa2.33□□□□□ -2.04
POLR1A-203ENST00000409681 KRTAP5-3Q6L8H2 238 aa2.24□□□□□ -2.05
POLR1A-203ENST00000409681 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
POLR1A-203ENST00000409681 HMCN1Q96RW7 5635 aa2.05□□□□□ -2.08
POLR1A-203ENST00000409681 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
POLR1A-203ENST00000409681 KRTAP4-12Q9BQ66 201 aa2.03□□□□□ -2.08
POLR1A-203ENST00000409681 KRTAP4-2Q9BYR5 136 aa2.03□□□□□ -2.08
POLR1A-203ENST00000409681 KRTAP5-8O75690 187 aa2□□□□□ -2.09
POLR1A-203ENST00000409681 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
POLR1A-203ENST00000409681 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
POLR1A-203ENST00000409681 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
POLR1A-203ENST00000409681 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.11
POLR1A-203ENST00000409681 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
POLR1A-203ENST00000409681 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
POLR1A-203ENST00000409681 KRTAP5-1Q6L8H4 278 aa1.78□□□□□ -2.13
POLR1A-203ENST00000409681 KRTAP5-11Q6L8G4 156 aa1.74□□□□□ -2.13
POLR1A-203ENST00000409681 MUC5BQ9HC84 5762 aaPredicted RBP1.73□□□□□ -2.13
POLR1A-203ENST00000409681 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
POLR1A-203ENST00000409681 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
POLR1A-203ENST00000409681 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
POLR1A-203ENST00000409681 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
POLR1A-203ENST00000409681 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 84.2 ms