RNA–Protein interactions for RNA: ENST00000406310.5

ESRRA-203, Transcript of estrogen related receptor alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ESRRA, Length 2,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-203ENST00000406310 KRTAP19-6Q3LI70 58 aa7.83□□□□□ -1.16
ESRRA-203ENST00000406310 KRTAP9-2Q9BYQ4 174 aa7.8□□□□□ -1.16
ESRRA-203ENST00000406310 FCGBPQ9Y6R7 5405 aaPredicted RBP7.72□□□□□ -1.17
ESRRA-203ENST00000406310 KRTAP12-4P60329 112 aa7.59□□□□□ -1.19
ESRRA-203ENST00000406310 CRCT1Q9UGL9 99 aa7.51□□□□□ -1.21
ESRRA-203ENST00000406310 LOC100996750A0A140TA64 210 aa7.5□□□□□ -1.21
ESRRA-203ENST00000406310 MT1GP13640 62 aa7.48□□□□□ -1.21
ESRRA-203ENST00000406310 MACF1Q9UPN3 7388 aaKnown RBP7.4□□□□□ -1.22
ESRRA-203ENST00000406310 MT1MQ8N339 61 aa7.4□□□□□ -1.23
ESRRA-203ENST00000406310 KRTAP4-3Q9BYR4 195 aa7.4□□□□□ -1.23
ESRRA-203ENST00000406310 KRTAP19-3Q7Z4W3 81 aa7.35□□□□□ -1.23
ESRRA-203ENST00000406310 SYNE2Q8WXH0 6885 aaKnown RBP7.27□□□□□ -1.25
ESRRA-203ENST00000406310 KRTAP9-6A0A140TA67 174 aa7.27□□□□□ -1.25
ESRRA-203ENST00000406310 MUC12Q9UKN1 5478 aa7.2□□□□□ -1.26
ESRRA-203ENST00000406310 MT1AP04731 61 aa7.16□□□□□ -1.26
ESRRA-203ENST00000406310 SPRR2FQ96RM1 72 aa7.1□□□□□ -1.27
ESRRA-203ENST00000406310 LCE3BQ5TA77 95 aa7.05□□□□□ -1.28
ESRRA-203ENST00000406310 LCE5AQ5TCM9 118 aa7.01□□□□□ -1.29
ESRRA-203ENST00000406310 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.95□□□□□ -1.3
ESRRA-203ENST00000406310 LCE3DQ9BYE3 92 aa6.92□□□□□ -1.3
ESRRA-203ENST00000406310 MDN1Q9NU22 5596 aa6.92□□□□□ -1.3
ESRRA-203ENST00000406310 LCE3EQ5T5B0 92 aa6.91□□□□□ -1.3
ESRRA-203ENST00000406310 KRTAP4-9Q9BYQ8 210 aa6.89□□□□□ -1.31
ESRRA-203ENST00000406310 KRTAP5-9P26371 169 aa6.84□□□□□ -1.31
ESRRA-203ENST00000406310 KRTAP6-1Q3LI64 71 aa6.77□□□□□ -1.33
ESRRA-203ENST00000406310 PRM1P04553 51 aa6.77□□□□□ -1.33
ESRRA-203ENST00000406310 KRTAP5-5Q701N2 237 aaPredicted RBP6.76□□□□□ -1.33
ESRRA-203ENST00000406310 DSTQ03001 7570 aaKnown RBP6.74□□□□□ -1.33
ESRRA-203ENST00000406310 LCE1AQ5T7P2 110 aa6.72□□□□□ -1.33
ESRRA-203ENST00000406310 KRTAP6-3Q3LI67 103 aa6.7□□□□□ -1.34
ESRRA-203ENST00000406310 KRTAP9-7A8MTY7 169 aa6.7□□□□□ -1.34
ESRRA-203ENST00000406310 SPRR2EP22531 72 aa6.7□□□□□ -1.34
ESRRA-203ENST00000406310 SPRR2BP35325 72 aa6.7□□□□□ -1.34
ESRRA-203ENST00000406310 SPRR2AP35326 72 aa6.7□□□□□ -1.34
ESRRA-203ENST00000406310 SYNE1Q8NF91 8797 aaKnown RBP6.66□□□□□ -1.34
ESRRA-203ENST00000406310 SPRR2DP22532 72 aa6.44□□□□□ -1.38
ESRRA-203ENST00000406310 KRTAP6-2Q3LI66 62 aa6.41□□□□□ -1.38
ESRRA-203ENST00000406310 NEBP20929 6669 aa6.36□□□□□ -1.39
ESRRA-203ENST00000406310 KRTAP9-4Q9BYQ2 154 aa6.33□□□□□ -1.4
ESRRA-203ENST00000406310 MT3P25713 68 aa6.09□□□□□ -1.43
ESRRA-203ENST00000406310 KRTAP2-2Q9BYT5 123 aa6.07□□□□□ -1.44
ESRRA-203ENST00000406310 KRTAP20-1Q3LI63 56 aa5.78□□□□□ -1.48
ESRRA-203ENST00000406310 KRTAP5-4Q6L8H1 288 aa5.72□□□□□ -1.49
ESRRA-203ENST00000406310 MT4P47944 62 aa5.7□□□□□ -1.5
ESRRA-203ENST00000406310 KRTAP4-6Q9BYQ5 205 aa5.64□□□□□ -1.51
ESRRA-203ENST00000406310 LCE4AQ5TA78 99 aa5.56□□□□□ -1.52
ESRRA-203ENST00000406310 OBSCNQ5VST9 7968 aa5.55□□□□□ -1.52
ESRRA-203ENST00000406310 LCE1DQ5T752 114 aa5.51□□□□□ -1.53
ESRRA-203ENST00000406310 HMCN1Q96RW7 5635 aa5.49□□□□□ -1.53
ESRRA-203ENST00000406310 KRTAP20-2Q3LI61 65 aa5.42□□□□□ -1.54
ESRRA-203ENST00000406310 KRTAP5-2Q701N4 177 aa5.2□□□□□ -1.58
ESRRA-203ENST00000406310 KRTAP5-3Q6L8H2 238 aa5.19□□□□□ -1.58
ESRRA-203ENST00000406310 LCE1EQ5T753 118 aa5.18□□□□□ -1.58
ESRRA-203ENST00000406310 MUC5ACP98088 5654 aa5.05□□□□□ -1.6
ESRRA-203ENST00000406310 KRTAP4-11Q9BYQ6 195 aa4.99□□□□□ -1.61
ESRRA-203ENST00000406310 KRTAP5-10Q6L8G5 202 aa4.97□□□□□ -1.61
ESRRA-203ENST00000406310 KRTAP5-1Q6L8H4 278 aa4.87□□□□□ -1.63
ESRRA-203ENST00000406310 AHNAK2Q8IVF2 5795 aa4.77□□□□□ -1.65
ESRRA-203ENST00000406310 LCE1BQ5T7P3 118 aa4.72□□□□□ -1.65
ESRRA-203ENST00000406310 GPR98Q8WXG9 6306 aa4.62□□□□□ -1.67
ESRRA-203ENST00000406310 LCE1CQ5T751 118 aa4.58□□□□□ -1.68
ESRRA-203ENST00000406310 KRTAP5-8O75690 187 aa4.51□□□□□ -1.69
ESRRA-203ENST00000406310 KRTAP4-2Q9BYR5 136 aa4.51□□□□□ -1.69
ESRRA-203ENST00000406310 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
ESRRA-203ENST00000406310 KRTAP21-1Q3LI58 79 aa4.38□□□□□ -1.71
ESRRA-203ENST00000406310 KRTAP21-2Q3LI59 83 aa4.37□□□□□ -1.71
ESRRA-203ENST00000406310 KRTAP5-7Q6L8G8 165 aa4.24□□□□□ -1.73
ESRRA-203ENST00000406310 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
ESRRA-203ENST00000406310 MUC5BQ9HC84 5762 aaPredicted RBP4.05□□□□□ -1.76
ESRRA-203ENST00000406310 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
ESRRA-203ENST00000406310 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
ESRRA-203ENST00000406310 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
ESRRA-203ENST00000406310 KRTAP4-12Q9BQ66 201 aa3.8□□□□□ -1.8
ESRRA-203ENST00000406310 MUC19Q7Z5P9 8384 aa3.74□□□□□ -1.81
ESRRA-203ENST00000406310 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
ESRRA-203ENST00000406310 PHGR1C9JFL3 82 aa3.34□□□□□ -1.88
ESRRA-203ENST00000406310 MUC16Q8WXI7 14507 aa2.3□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 13.4 ms