RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 BRK1Q8WUW1 75 aa6.83□□□□□ -1.32
HDAC11-204ENST00000404040 C10orf95Q9H7T3 257 aa6.83□□□□□ -1.32
HDAC11-204ENST00000404040 CDC42SE1Q9NRR8 79 aa6.83□□□□□ -1.32
HDAC11-204ENST00000404040 LCE5AQ5TCM9 118 aa6.81□□□□□ -1.32
HDAC11-204ENST00000404040 KRTAP19-7Q3SYF9 63 aa6.71□□□□□ -1.34
HDAC11-204ENST00000404040 KRTAP19-3Q7Z4W3 81 aa6.71□□□□□ -1.34
HDAC11-204ENST00000404040 LCE1DQ5T752 114 aa6.7□□□□□ -1.34
HDAC11-204ENST00000404040 HMCN1Q96RW7 5635 aa6.69□□□□□ -1.34
HDAC11-204ENST00000404040 MT1EP04732 61 aa6.68□□□□□ -1.34
HDAC11-204ENST00000404040 KRTAP25-1Q3LHN0 102 aa6.66□□□□□ -1.34
HDAC11-204ENST00000404040 AHNAK2Q8IVF2 5795 aa6.64□□□□□ -1.35
HDAC11-204ENST00000404040 KTN1-AS1Q86SY8 53 aa6.57□□□□□ -1.36
HDAC11-204ENST00000404040 LCE4AQ5TA78 99 aa6.56□□□□□ -1.36
HDAC11-204ENST00000404040 MT4P47944 62 aa6.55□□□□□ -1.36
HDAC11-204ENST00000404040 ROMO1P60602 79 aa6.55□□□□□ -1.36
HDAC11-204ENST00000404040 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
HDAC11-204ENST00000404040 MT1GP13640 62 aa6.48□□□□□ -1.37
HDAC11-204ENST00000404040 KRTAP19-5Q3LI72 72 aa6.48□□□□□ -1.37
HDAC11-204ENST00000404040 KRTAP5-10Q6L8G5 202 aa6.48□□□□□ -1.37
HDAC11-204ENST00000404040 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
HDAC11-204ENST00000404040 PP632Q6XCG6 107 aa6.44□□□□□ -1.38
HDAC11-204ENST00000404040 MT1MQ8N339 61 aa6.39□□□□□ -1.39
HDAC11-204ENST00000404040 KRTAP5-4Q6L8H1 288 aa6.38□□□□□ -1.39
HDAC11-204ENST00000404040 KRTAP12-3P60328 96 aa6.35□□□□□ -1.39
HDAC11-204ENST00000404040 KRTAP4-6Q9BYQ5 205 aa6.32□□□□□ -1.4
HDAC11-204ENST00000404040 H3BS24 57 aa6.31□□□□□ -1.4
HDAC11-204ENST00000404040 MT1LQ93083 61 aa6.3□□□□□ -1.4
HDAC11-204ENST00000404040 KRTAP5-7Q6L8G8 165 aa6.29□□□□□ -1.4
HDAC11-204ENST00000404040 KRTAP4-3Q9BYR4 195 aa6.25□□□□□ -1.41
HDAC11-204ENST00000404040 KRTAP5-3Q6L8H2 238 aa6.21□□□□□ -1.42
HDAC11-204ENST00000404040 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.42
HDAC11-204ENST00000404040 KRTAP15-1Q3LI76 137 aa6.1□□□□□ -1.43
HDAC11-204ENST00000404040 KRTAP20-2Q3LI61 65 aa6.04□□□□□ -1.44
HDAC11-204ENST00000404040 SPRR5A0A1B0GTR4 108 aa5.97□□□□□ -1.45
HDAC11-204ENST00000404040 KRTAP4-7Q9BYR0 210 aa5.96□□□□□ -1.46
HDAC11-204ENST00000404040 KRTAP5-5Q701N2 237 aaPredicted RBP5.92□□□□□ -1.46
HDAC11-204ENST00000404040 PRAC1Q96KF2 57 aa5.91□□□□□ -1.46
HDAC11-204ENST00000404040 LCE3CQ5T5A8 94 aa5.89□□□□□ -1.47
HDAC11-204ENST00000404040 KRTAP12-4P60329 112 aa5.85□□□□□ -1.47
HDAC11-204ENST00000404040 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
HDAC11-204ENST00000404040 LOC100996750A0A140TA64 210 aa5.67□□□□□ -1.5
HDAC11-204ENST00000404040 AHNAKQ09666 5890 aaKnown RBP5.63□□□□□ -1.51
HDAC11-204ENST00000404040 KRTAP4-11Q9BYQ6 195 aa5.63□□□□□ -1.51
HDAC11-204ENST00000404040 A0A0A0MQY5 61 aa5.62□□□□□ -1.51
HDAC11-204ENST00000404040 MUC5ACP98088 5654 aa5.57□□□□□ -1.52
HDAC11-204ENST00000404040 MUC5BQ9HC84 5762 aaPredicted RBP5.52□□□□□ -1.53
HDAC11-204ENST00000404040 KRTAP5-2Q701N4 177 aa5.52□□□□□ -1.53
HDAC11-204ENST00000404040 KRTAP9-6A8MVA2 160 aa5.45□□□□□ -1.54
HDAC11-204ENST00000404040 KRTAP5-8O75690 187 aa5.45□□□□□ -1.54
HDAC11-204ENST00000404040 MT1AP04731 61 aa5.35□□□□□ -1.55
HDAC11-204ENST00000404040 KRTAP6-1Q3LI64 71 aa5.35□□□□□ -1.55
HDAC11-204ENST00000404040 OBSCNQ5VST9 7968 aa5.26□□□□□ -1.57
HDAC11-204ENST00000404040 NDUFAF8A1L188 74 aa5.26□□□□□ -1.57
HDAC11-204ENST00000404040 KRTAP9-9Q9BYP9 154 aa5.24□□□□□ -1.57
HDAC11-204ENST00000404040 KRTAP6-2Q3LI66 62 aa5.2□□□□□ -1.58
HDAC11-204ENST00000404040 LUZP6Q538Z0 58 aa5.2□□□□□ -1.58
HDAC11-204ENST00000404040 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
HDAC11-204ENST00000404040 KRTAP5-1Q6L8H4 278 aa5.02□□□□□ -1.61
HDAC11-204ENST00000404040 MT3P25713 68 aa4.91□□□□□ -1.62
HDAC11-204ENST00000404040 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
HDAC11-204ENST00000404040 INE1O15225 51 aa4.49□□□□□ -1.69
HDAC11-204ENST00000404040 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
HDAC11-204ENST00000404040 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
HDAC11-204ENST00000404040 LCE3DQ9BYE3 92 aa4.35□□□□□ -1.71
HDAC11-204ENST00000404040 LCE1CQ5T751 118 aa4.29□□□□□ -1.72
HDAC11-204ENST00000404040 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
HDAC11-204ENST00000404040 KRTAP4-12Q9BQ66 201 aa4.16□□□□□ -1.74
HDAC11-204ENST00000404040 KRTAP5-11Q6L8G4 156 aa3.99□□□□□ -1.77
HDAC11-204ENST00000404040 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
HDAC11-204ENST00000404040 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
HDAC11-204ENST00000404040 PHGR1C9JFL3 82 aa3.78□□□□□ -1.8
HDAC11-204ENST00000404040 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
HDAC11-204ENST00000404040 PRM1P04553 51 aa3.34□□□□□ -1.87
HDAC11-204ENST00000404040 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
HDAC11-204ENST00000404040 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
HDAC11-204ENST00000404040 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
HDAC11-204ENST00000404040 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms