RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 LCE1AQ5T7P2 110 aa3.43□□□□□ -1.86
ITSN1-207ENST00000399338 LOC100996750A0A140TA64 210 aa3.41□□□□□ -1.86
ITSN1-207ENST00000399338 KRTAP9-2Q9BYQ4 174 aa3.41□□□□□ -1.86
ITSN1-207ENST00000399338 MT1EP04732 61 aa3.39□□□□□ -1.87
ITSN1-207ENST00000399338 PRM1P04553 51 aa3.38□□□□□ -1.87
ITSN1-207ENST00000399338 KRTAP9-7A8MTY7 169 aa3.35□□□□□ -1.87
ITSN1-207ENST00000399338 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.88
ITSN1-207ENST00000399338 MT1GP13640 62 aa3.3□□□□□ -1.88
ITSN1-207ENST00000399338 KRTAP4-9Q9BYQ8 210 aa3.28□□□□□ -1.88
ITSN1-207ENST00000399338 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
ITSN1-207ENST00000399338 MT1AP04731 61 aa3.27□□□□□ -1.89
ITSN1-207ENST00000399338 USH2AO75445 5202 aa3.24□□□□□ -1.89
ITSN1-207ENST00000399338 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
ITSN1-207ENST00000399338 SYNE1Q8NF91 8797 aaKnown RBP3.21□□□□□ -1.9
ITSN1-207ENST00000399338 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
ITSN1-207ENST00000399338 LCE3BQ5TA77 95 aa3.2□□□□□ -1.9
ITSN1-207ENST00000399338 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
ITSN1-207ENST00000399338 CRCT1Q9UGL9 99 aa3.18□□□□□ -1.9
ITSN1-207ENST00000399338 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
ITSN1-207ENST00000399338 KRTAP4-6Q9BYQ5 205 aa3.15□□□□□ -1.91
ITSN1-207ENST00000399338 MT1MQ8N339 61 aa3.12□□□□□ -1.91
ITSN1-207ENST00000399338 KRTAP19-6Q3LI70 58 aa3.11□□□□□ -1.91
ITSN1-207ENST00000399338 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
ITSN1-207ENST00000399338 LCE1DQ5T752 114 aa3.09□□□□□ -1.91
ITSN1-207ENST00000399338 SSPOA2VEC9 5147 aa3.09□□□□□ -1.91
ITSN1-207ENST00000399338 KRTAP6-2Q3LI66 62 aa3.08□□□□□ -1.92
ITSN1-207ENST00000399338 LCE5AQ5TCM9 118 aa3.08□□□□□ -1.92
ITSN1-207ENST00000399338 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
ITSN1-207ENST00000399338 LCE4AQ5TA78 99 aa3.03□□□□□ -1.92
ITSN1-207ENST00000399338 KRTAP19-3Q7Z4W3 81 aa3.02□□□□□ -1.93
ITSN1-207ENST00000399338 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
ITSN1-207ENST00000399338 FCGBPQ9Y6R7 5405 aaPredicted RBP2.96□□□□□ -1.94
ITSN1-207ENST00000399338 SPRR2FQ96RM1 72 aa2.95□□□□□ -1.94
ITSN1-207ENST00000399338 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.92□□□□□ -1.94
ITSN1-207ENST00000399338 MUC12Q9UKN1 5478 aa2.89□□□□□ -1.95
ITSN1-207ENST00000399338 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
ITSN1-207ENST00000399338 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
ITSN1-207ENST00000399338 MT3P25713 68 aa2.76□□□□□ -1.97
ITSN1-207ENST00000399338 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
ITSN1-207ENST00000399338 SPRR2AP35326 72 aa2.74□□□□□ -1.97
ITSN1-207ENST00000399338 SPRR2EP22531 72 aa2.68□□□□□ -1.98
ITSN1-207ENST00000399338 SPRR2DP22532 72 aa2.62□□□□□ -1.99
ITSN1-207ENST00000399338 KRTAP5-9P26371 169 aa2.62□□□□□ -1.99
ITSN1-207ENST00000399338 SPRR2BP35325 72 aa2.61□□□□□ -1.99
ITSN1-207ENST00000399338 FSIP2Q5CZC0 6907 aa2.58□□□□□ -2
ITSN1-207ENST00000399338 HMCN1Q96RW7 5635 aa2.55□□□□□ -2
ITSN1-207ENST00000399338 SYNE2Q8WXH0 6885 aaKnown RBP2.53□□□□□ -2
ITSN1-207ENST00000399338 MACF1Q9UPN3 7388 aaKnown RBP2.51□□□□□ -2.01
ITSN1-207ENST00000399338 KRTAP4-11Q9BYQ6 195 aa2.49□□□□□ -2.01
ITSN1-207ENST00000399338 KRTAP4-2Q9BYR5 136 aa2.48□□□□□ -2.01
ITSN1-207ENST00000399338 MDN1Q9NU22 5596 aa2.42□□□□□ -2.02
ITSN1-207ENST00000399338 KRTAP5-4Q6L8H1 288 aa2.33□□□□□ -2.04
ITSN1-207ENST00000399338 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
ITSN1-207ENST00000399338 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
ITSN1-207ENST00000399338 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
ITSN1-207ENST00000399338 KRTAP5-2Q701N4 177 aa2.22□□□□□ -2.05
ITSN1-207ENST00000399338 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
ITSN1-207ENST00000399338 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
ITSN1-207ENST00000399338 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
ITSN1-207ENST00000399338 GPR98Q8WXG9 6306 aa2.16□□□□□ -2.06
ITSN1-207ENST00000399338 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
ITSN1-207ENST00000399338 KRTAP20-2Q3LI61 65 aa2.14□□□□□ -2.07
ITSN1-207ENST00000399338 KRTAP5-3Q6L8H2 238 aa2.13□□□□□ -2.07
ITSN1-207ENST00000399338 KRTAP20-1Q3LI63 56 aa2.08□□□□□ -2.08
ITSN1-207ENST00000399338 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
ITSN1-207ENST00000399338 MT4P47944 62 aa2.04□□□□□ -2.08
ITSN1-207ENST00000399338 NEBP20929 6669 aa2.02□□□□□ -2.09
ITSN1-207ENST00000399338 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
ITSN1-207ENST00000399338 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.86□□□□□ -2.11
ITSN1-207ENST00000399338 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
ITSN1-207ENST00000399338 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
ITSN1-207ENST00000399338 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
ITSN1-207ENST00000399338 AHNAK2Q8IVF2 5795 aa1.73□□□□□ -2.13
ITSN1-207ENST00000399338 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
ITSN1-207ENST00000399338 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
ITSN1-207ENST00000399338 PHGR1C9JFL3 82 aa1.4□□□□□ -2.19
ITSN1-207ENST00000399338 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 386.5 ms