RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 KTN1-AS1Q86SY8 53 aa6.98□□□□□ -1.29
SMIM11A-202ENST00000399295 MDN1Q9NU22 5596 aa6.95□□□□□ -1.3
SMIM11A-202ENST00000399295 KRTAP10-12P60413 245 aa6.95□□□□□ -1.3
SMIM11A-202ENST00000399295 KRTAP25-1Q3LHN0 102 aa6.95□□□□□ -1.3
SMIM11A-202ENST00000399295 TNP1P09430 55 aa6.94□□□□□ -1.3
SMIM11A-202ENST00000399295 SPRR2FQ96RM1 72 aa6.94□□□□□ -1.3
SMIM11A-202ENST00000399295 KRTAP2-3P0C7H8 128 aa6.9□□□□□ -1.3
SMIM11A-202ENST00000399295 KRTAP2-4Q9BYR9 128 aa6.9□□□□□ -1.3
SMIM11A-202ENST00000399295 SPRR2EP22531 72 aa6.79□□□□□ -1.32
SMIM11A-202ENST00000399295 SPRR2BP35325 72 aa6.79□□□□□ -1.32
SMIM11A-202ENST00000399295 SPRR2AP35326 72 aa6.79□□□□□ -1.32
SMIM11A-202ENST00000399295 PRAC1Q96KF2 57 aa6.76□□□□□ -1.33
SMIM11A-202ENST00000399295 KRTAP23-1A1A580 65 aa6.75□□□□□ -1.33
SMIM11A-202ENST00000399295 LCE1AQ5T7P2 110 aa6.73□□□□□ -1.33
SMIM11A-202ENST00000399295 PP632Q6XCG6 107 aa6.73□□□□□ -1.33
SMIM11A-202ENST00000399295 KRTAP2-2Q9BYT5 123 aa6.65□□□□□ -1.34
SMIM11A-202ENST00000399295 KRTAP2-1Q9BYU5 128 aa6.65□□□□□ -1.34
SMIM11A-202ENST00000399295 SVIPQ8NHG7 77 aa6.6□□□□□ -1.35
SMIM11A-202ENST00000399295 LCE3AQ5TA76 89 aa6.58□□□□□ -1.36
SMIM11A-202ENST00000399295 SPRR2DP22532 72 aa6.57□□□□□ -1.36
SMIM11A-202ENST00000399295 KRTAP19-7Q3SYF9 63 aa6.54□□□□□ -1.36
SMIM11A-202ENST00000399295 MT1EP04732 61 aa6.47□□□□□ -1.37
SMIM11A-202ENST00000399295 GPR98Q8WXG9 6306 aa6.45□□□□□ -1.38
SMIM11A-202ENST00000399295 KRTAP19-5Q3LI72 72 aa6.44□□□□□ -1.38
SMIM11A-202ENST00000399295 KRTAP19-3Q7Z4W3 81 aa6.38□□□□□ -1.39
SMIM11A-202ENST00000399295 KRTAP12-3P60328 96 aa6.36□□□□□ -1.39
SMIM11A-202ENST00000399295 MT1GP13640 62 aa6.28□□□□□ -1.4
SMIM11A-202ENST00000399295 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
SMIM11A-202ENST00000399295 MT1LQ93083 61 aa6.22□□□□□ -1.41
SMIM11A-202ENST00000399295 MT1MQ8N339 61 aa6.15□□□□□ -1.42
SMIM11A-202ENST00000399295 DSTQ03001 7570 aaKnown RBP6.15□□□□□ -1.43
SMIM11A-202ENST00000399295 KRTAP19-4Q3LI73 84 aa6.12□□□□□ -1.43
SMIM11A-202ENST00000399295 KRTAP4-3Q9BYR4 195 aa6□□□□□ -1.45
SMIM11A-202ENST00000399295 LCE3CQ5T5A8 94 aa5.94□□□□□ -1.46
SMIM11A-202ENST00000399295 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.93□□□□□ -1.46
SMIM11A-202ENST00000399295 SPRR5A0A1B0GTR4 108 aa5.85□□□□□ -1.47
SMIM11A-202ENST00000399295 HMCN1Q96RW7 5635 aa5.79□□□□□ -1.48
SMIM11A-202ENST00000399295 KRTAP5-4Q6L8H1 288 aa5.78□□□□□ -1.48
SMIM11A-202ENST00000399295 AHNAK2Q8IVF2 5795 aa5.74□□□□□ -1.49
SMIM11A-202ENST00000399295 MT4P47944 62 aa5.73□□□□□ -1.49
SMIM11A-202ENST00000399295 KRTAP5-10Q6L8G5 202 aa5.69□□□□□ -1.5
SMIM11A-202ENST00000399295 LUZP6Q538Z0 58 aa5.66□□□□□ -1.5
SMIM11A-202ENST00000399295 KRTAP5-5Q701N2 237 aaPredicted RBP5.61□□□□□ -1.51
SMIM11A-202ENST00000399295 KRTAP5-7Q6L8G8 165 aa5.55□□□□□ -1.52
SMIM11A-202ENST00000399295 KRTAP9-6A8MVA2 160 aa5.53□□□□□ -1.52
SMIM11A-202ENST00000399295 KRTAP12-4P60329 112 aa5.49□□□□□ -1.53
SMIM11A-202ENST00000399295 KRTAP20-2Q3LI61 65 aa5.41□□□□□ -1.54
SMIM11A-202ENST00000399295 SYNE1Q8NF91 8797 aaKnown RBP5.39□□□□□ -1.55
SMIM11A-202ENST00000399295 NDUFAF8A1L188 74 aa5.35□□□□□ -1.55
SMIM11A-202ENST00000399295 KRTAP5-11Q6L8G4 156 aa5.34□□□□□ -1.55
SMIM11A-202ENST00000399295 MT1AP04731 61 aa5.3□□□□□ -1.56
SMIM11A-202ENST00000399295 KRTAP6-1Q3LI64 71 aa5.25□□□□□ -1.57
SMIM11A-202ENST00000399295 KRTAP5-2Q701N4 177 aa5.07□□□□□ -1.6
SMIM11A-202ENST00000399295 KRTAP5-1Q6L8H4 278 aa5.04□□□□□ -1.6
SMIM11A-202ENST00000399295 KRTAP6-2Q3LI66 62 aa4.99□□□□□ -1.61
SMIM11A-202ENST00000399295 KRTAP4-4Q9BYR3 166 aa4.97□□□□□ -1.61
SMIM11A-202ENST00000399295 AHNAKQ09666 5890 aaKnown RBP4.94□□□□□ -1.62
SMIM11A-202ENST00000399295 MT3P25713 68 aa4.85□□□□□ -1.63
SMIM11A-202ENST00000399295 MUC5ACP98088 5654 aa4.85□□□□□ -1.63
SMIM11A-202ENST00000399295 MUC5BQ9HC84 5762 aaPredicted RBP4.83□□□□□ -1.64
SMIM11A-202ENST00000399295 A0A0A0MQY5 61 aa4.77□□□□□ -1.65
SMIM11A-202ENST00000399295 KRTAP5-8O75690 187 aa4.74□□□□□ -1.65
SMIM11A-202ENST00000399295 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
SMIM11A-202ENST00000399295 INE1O15225 51 aa4.52□□□□□ -1.69
SMIM11A-202ENST00000399295 H3BS24 57 aa4.48□□□□□ -1.69
SMIM11A-202ENST00000399295 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
SMIM11A-202ENST00000399295 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
SMIM11A-202ENST00000399295 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
SMIM11A-202ENST00000399295 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
SMIM11A-202ENST00000399295 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
SMIM11A-202ENST00000399295 PRM1P04553 51 aa3.68□□□□□ -1.82
SMIM11A-202ENST00000399295 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
SMIM11A-202ENST00000399295 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
SMIM11A-202ENST00000399295 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
SMIM11A-202ENST00000399295 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
SMIM11A-202ENST00000399295 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
SMIM11A-202ENST00000399295 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 81.6 ms