RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 KRTAP19-2Q3LHN2 52 aa3.35□□□□□ -1.87
HLCS-202ENST00000399120 MT1AP04731 61 aa3.33□□□□□ -1.88
HLCS-202ENST00000399120 ABCA13Q86UQ4 5058 aa3.32□□□□□ -1.88
HLCS-202ENST00000399120 KRTAP19-6Q3LI70 58 aa3.32□□□□□ -1.88
HLCS-202ENST00000399120 LPAP08519 4548 aa3.28□□□□□ -1.88
HLCS-202ENST00000399120 KRTAP4-9Q9BYQ8 210 aa3.28□□□□□ -1.88
HLCS-202ENST00000399120 PCLOQ9Y6V0 5065 aa3.27□□□□□ -1.89
HLCS-202ENST00000399120 KRTAP9-2Q9BYQ4 174 aa3.26□□□□□ -1.89
HLCS-202ENST00000399120 KRTAP2-3P0C7H8 128 aa3.26□□□□□ -1.89
HLCS-202ENST00000399120 KRTAP2-4Q9BYR9 128 aa3.26□□□□□ -1.89
HLCS-202ENST00000399120 KRTAP2-1Q9BYU5 128 aa3.26□□□□□ -1.89
HLCS-202ENST00000399120 MUC17Q685J3 4493 aa3.23□□□□□ -1.89
HLCS-202ENST00000399120 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
HLCS-202ENST00000399120 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
HLCS-202ENST00000399120 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
HLCS-202ENST00000399120 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
HLCS-202ENST00000399120 FLGP20930 4061 aaPredicted RBP3.21□□□□□ -1.9
HLCS-202ENST00000399120 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
HLCS-202ENST00000399120 KRTAP6-2Q3LI66 62 aa3.16□□□□□ -1.9
HLCS-202ENST00000399120 KRTAP19-7Q3SYF9 63 aa3.13□□□□□ -1.91
HLCS-202ENST00000399120 KRTAP9-6A0A140TA67 174 aa3.12□□□□□ -1.91
HLCS-202ENST00000399120 RNF213Q63HN8 5207 aa3.07□□□□□ -1.92
HLCS-202ENST00000399120 KRTAP9-4Q9BYQ2 154 aa3.07□□□□□ -1.92
HLCS-202ENST00000399120 HMCN2Q8NDA2 5059 aa3.06□□□□□ -1.92
HLCS-202ENST00000399120 KRTAP6-1Q3LI64 71 aa3.05□□□□□ -1.92
HLCS-202ENST00000399120 LCE2AQ5TA79 106 aaPredicted RBP3.05□□□□□ -1.92
HLCS-202ENST00000399120 SYNE1Q8NF91 8797 aaKnown RBP3.04□□□□□ -1.92
HLCS-202ENST00000399120 UBR4Q5T4S7 5183 aa3.04□□□□□ -1.92
HLCS-202ENST00000399120 LCE4AQ5TA78 99 aa3.03□□□□□ -1.92
HLCS-202ENST00000399120 FAT4Q6V0I7 4981 aa3.02□□□□□ -1.93
HLCS-202ENST00000399120 KRTAP9-7A8MTY7 169 aa2.99□□□□□ -1.93
HLCS-202ENST00000399120 KRTAP6-3Q3LI67 103 aa2.95□□□□□ -1.94
HLCS-202ENST00000399120 KRTAP2-2Q9BYT5 123 aa2.92□□□□□ -1.94
HLCS-202ENST00000399120 SYNE2Q8WXH0 6885 aaKnown RBP2.89□□□□□ -1.95
HLCS-202ENST00000399120 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
HLCS-202ENST00000399120 FSIP2Q5CZC0 6907 aa2.86□□□□□ -1.95
HLCS-202ENST00000399120 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
HLCS-202ENST00000399120 MUC2Q02817 5179 aa2.84□□□□□ -1.95
HLCS-202ENST00000399120 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
HLCS-202ENST00000399120 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.78□□□□□ -1.96
HLCS-202ENST00000399120 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
HLCS-202ENST00000399120 USH2AO75445 5202 aa2.61□□□□□ -1.99
HLCS-202ENST00000399120 KRTAP20-2Q3LI61 65 aa2.6□□□□□ -1.99
HLCS-202ENST00000399120 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
HLCS-202ENST00000399120 SSPOA2VEC9 5147 aa2.43□□□□□ -2.02
HLCS-202ENST00000399120 FCGBPQ9Y6R7 5405 aaPredicted RBP2.42□□□□□ -2.02
HLCS-202ENST00000399120 MACF1Q9UPN3 7388 aaKnown RBP2.42□□□□□ -2.02
HLCS-202ENST00000399120 KRTAP4-6Q9BYQ5 205 aa2.41□□□□□ -2.02
HLCS-202ENST00000399120 DSTQ03001 7570 aaKnown RBP2.4□□□□□ -2.03
HLCS-202ENST00000399120 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.03
HLCS-202ENST00000399120 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.03
HLCS-202ENST00000399120 KMT2DO14686 5537 aa2.37□□□□□ -2.03
HLCS-202ENST00000399120 KRTAP5-9P26371 169 aa2.34□□□□□ -2.03
HLCS-202ENST00000399120 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
HLCS-202ENST00000399120 NEBP20929 6669 aa2.23□□□□□ -2.05
HLCS-202ENST00000399120 MUC12Q9UKN1 5478 aa2.23□□□□□ -2.05
HLCS-202ENST00000399120 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
HLCS-202ENST00000399120 KRTAP5-4Q6L8H1 288 aa2.2□□□□□ -2.06
HLCS-202ENST00000399120 MDN1Q9NU22 5596 aa2.18□□□□□ -2.06
HLCS-202ENST00000399120 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
HLCS-202ENST00000399120 KRTAP5-3Q6L8H2 238 aa1.9□□□□□ -2.11
HLCS-202ENST00000399120 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
HLCS-202ENST00000399120 KRTAP5-2Q701N4 177 aa1.74□□□□□ -2.13
HLCS-202ENST00000399120 MUC5ACP98088 5654 aa1.74□□□□□ -2.13
HLCS-202ENST00000399120 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
HLCS-202ENST00000399120 KRTAP5-8O75690 187 aa1.72□□□□□ -2.13
HLCS-202ENST00000399120 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
HLCS-202ENST00000399120 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
HLCS-202ENST00000399120 KRTAP5-1Q6L8H4 278 aa1.52□□□□□ -2.17
HLCS-202ENST00000399120 MUC5BQ9HC84 5762 aaPredicted RBP1.52□□□□□ -2.17
HLCS-202ENST00000399120 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
HLCS-202ENST00000399120 AHNAKQ09666 5890 aaKnown RBP1.46□□□□□ -2.18
HLCS-202ENST00000399120 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
HLCS-202ENST00000399120 KRTAP5-7Q6L8G8 165 aa1.42□□□□□ -2.18
HLCS-202ENST00000399120 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.41□□□□□ -2.18
HLCS-202ENST00000399120 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
HLCS-202ENST00000399120 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 137.2 ms