RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 KRTAP2-3P0C7H8 128 aa8.78□□□□□ -1
COL13A1-203ENST00000398969 KRTAP2-4Q9BYR9 128 aa8.78□□□□□ -1
COL13A1-203ENST00000398969 KRTAP2-1Q9BYU5 128 aa8.78□□□□□ -1
COL13A1-203ENST00000398969 CRCT1Q9UGL9 99 aa8.49□□□□□ -1.05
COL13A1-203ENST00000398969 MACF1Q9UPN3 7388 aaKnown RBP8.39□□□□□ -1.07
COL13A1-203ENST00000398969 MUC12Q9UKN1 5478 aa8.36□□□□□ -1.07
COL13A1-203ENST00000398969 KRTAP4-3Q9BYR4 195 aa8.34□□□□□ -1.07
COL13A1-203ENST00000398969 LOC100996750A0A140TA64 210 aa8.32□□□□□ -1.08
COL13A1-203ENST00000398969 SPRR2FQ96RM1 72 aa8.31□□□□□ -1.08
COL13A1-203ENST00000398969 KRTAP19-3Q7Z4W3 81 aa8.3□□□□□ -1.08
COL13A1-203ENST00000398969 MT1GP13640 62 aa8.25□□□□□ -1.09
COL13A1-203ENST00000398969 MT1MQ8N339 61 aa8.25□□□□□ -1.09
COL13A1-203ENST00000398969 SYNE2Q8WXH0 6885 aaKnown RBP8.14□□□□□ -1.11
COL13A1-203ENST00000398969 LCE5AQ5TCM9 118 aa8.12□□□□□ -1.11
COL13A1-203ENST00000398969 KRTAP9-6A0A140TA67 174 aa8.09□□□□□ -1.11
COL13A1-203ENST00000398969 KRTAP5-9P26371 169 aa8.05□□□□□ -1.12
COL13A1-203ENST00000398969 MDN1Q9NU22 5596 aa7.89□□□□□ -1.15
COL13A1-203ENST00000398969 LCE1AQ5T7P2 110 aa7.89□□□□□ -1.15
COL13A1-203ENST00000398969 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.86□□□□□ -1.15
COL13A1-203ENST00000398969 DSTQ03001 7570 aaKnown RBP7.79□□□□□ -1.16
COL13A1-203ENST00000398969 SPRR2EP22531 72 aa7.76□□□□□ -1.17
COL13A1-203ENST00000398969 SPRR2BP35325 72 aa7.76□□□□□ -1.17
COL13A1-203ENST00000398969 SPRR2AP35326 72 aa7.76□□□□□ -1.17
COL13A1-203ENST00000398969 KRTAP12-4P60329 112 aa7.75□□□□□ -1.17
COL13A1-203ENST00000398969 KRTAP6-3Q3LI67 103 aa7.72□□□□□ -1.17
COL13A1-203ENST00000398969 LCE3BQ5TA77 95 aa7.64□□□□□ -1.19
COL13A1-203ENST00000398969 KRTAP6-1Q3LI64 71 aa7.5□□□□□ -1.21
COL13A1-203ENST00000398969 KRTAP4-9Q9BYQ8 210 aa7.49□□□□□ -1.21
COL13A1-203ENST00000398969 MT1AP04731 61 aa7.46□□□□□ -1.22
COL13A1-203ENST00000398969 SPRR2DP22532 72 aa7.45□□□□□ -1.22
COL13A1-203ENST00000398969 KRTAP9-7A8MTY7 169 aa7.42□□□□□ -1.22
COL13A1-203ENST00000398969 KRTAP5-5Q701N2 237 aaPredicted RBP7.34□□□□□ -1.23
COL13A1-203ENST00000398969 SYNE1Q8NF91 8797 aaKnown RBP7.25□□□□□ -1.25
COL13A1-203ENST00000398969 LCE3DQ9BYE3 92 aa7.23□□□□□ -1.25
COL13A1-203ENST00000398969 LCE3EQ5T5B0 92 aa7.15□□□□□ -1.27
COL13A1-203ENST00000398969 NEBP20929 6669 aa7.14□□□□□ -1.27
COL13A1-203ENST00000398969 KRTAP9-4Q9BYQ2 154 aa6.98□□□□□ -1.29
COL13A1-203ENST00000398969 PRM1P04553 51 aa6.86□□□□□ -1.31
COL13A1-203ENST00000398969 KRTAP5-4Q6L8H1 288 aa6.81□□□□□ -1.32
COL13A1-203ENST00000398969 KRTAP6-2Q3LI66 62 aa6.71□□□□□ -1.34
COL13A1-203ENST00000398969 MT3P25713 68 aa6.66□□□□□ -1.34
COL13A1-203ENST00000398969 KRTAP20-1Q3LI63 56 aa6.57□□□□□ -1.36
COL13A1-203ENST00000398969 LCE4AQ5TA78 99 aa6.57□□□□□ -1.36
COL13A1-203ENST00000398969 KRTAP2-2Q9BYT5 123 aa6.56□□□□□ -1.36
COL13A1-203ENST00000398969 KRTAP4-6Q9BYQ5 205 aa6.52□□□□□ -1.37
COL13A1-203ENST00000398969 MT4P47944 62 aa6.52□□□□□ -1.37
COL13A1-203ENST00000398969 KRTAP20-2Q3LI61 65 aa6.38□□□□□ -1.39
COL13A1-203ENST00000398969 LCE1DQ5T752 114 aa6.32□□□□□ -1.4
COL13A1-203ENST00000398969 OBSCNQ5VST9 7968 aa6.31□□□□□ -1.4
COL13A1-203ENST00000398969 HMCN1Q96RW7 5635 aa6.28□□□□□ -1.4
COL13A1-203ENST00000398969 KRTAP5-2Q701N4 177 aa6.24□□□□□ -1.41
COL13A1-203ENST00000398969 KRTAP5-3Q6L8H2 238 aa6.13□□□□□ -1.43
COL13A1-203ENST00000398969 MUC5ACP98088 5654 aa5.6□□□□□ -1.51
COL13A1-203ENST00000398969 LCE1EQ5T753 118 aa5.6□□□□□ -1.51
COL13A1-203ENST00000398969 KRTAP4-11Q9BYQ6 195 aa5.44□□□□□ -1.54
COL13A1-203ENST00000398969 KRTAP5-1Q6L8H4 278 aa5.37□□□□□ -1.55
COL13A1-203ENST00000398969 AHNAK2Q8IVF2 5795 aa5.36□□□□□ -1.55
COL13A1-203ENST00000398969 LCE1BQ5T7P3 118 aa5.34□□□□□ -1.55
COL13A1-203ENST00000398969 KRTAP5-10Q6L8G5 202 aa5.3□□□□□ -1.56
COL13A1-203ENST00000398969 KRTAP4-2Q9BYR5 136 aa5.25□□□□□ -1.57
COL13A1-203ENST00000398969 LCE1CQ5T751 118 aa5.24□□□□□ -1.57
COL13A1-203ENST00000398969 KRTAP5-8O75690 187 aa5.23□□□□□ -1.57
COL13A1-203ENST00000398969 KRTAP5-7Q6L8G8 165 aa5.09□□□□□ -1.59
COL13A1-203ENST00000398969 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.92□□□□□ -1.62
COL13A1-203ENST00000398969 KRTAP21-2Q3LI59 83 aa4.85□□□□□ -1.63
COL13A1-203ENST00000398969 GPR98Q8WXG9 6306 aa4.8□□□□□ -1.64
COL13A1-203ENST00000398969 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
COL13A1-203ENST00000398969 KRTAP5-11Q6L8G4 156 aa4.58□□□□□ -1.68
COL13A1-203ENST00000398969 MUC5BQ9HC84 5762 aaPredicted RBP4.52□□□□□ -1.69
COL13A1-203ENST00000398969 KRTAP4-4Q9BYR3 166 aa4.4□□□□□ -1.71
COL13A1-203ENST00000398969 KRTAP21-1Q3LI58 79 aa4.34□□□□□ -1.72
COL13A1-203ENST00000398969 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
COL13A1-203ENST00000398969 MUC19Q7Z5P9 8384 aa4.07□□□□□ -1.76
COL13A1-203ENST00000398969 LCE1FQ5T754 118 aa4□□□□□ -1.77
COL13A1-203ENST00000398969 AHNAKQ09666 5890 aaKnown RBP3.97□□□□□ -1.77
COL13A1-203ENST00000398969 PHGR1C9JFL3 82 aa3.95□□□□□ -1.78
COL13A1-203ENST00000398969 MUC16Q8WXI7 14507 aa2.54□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 63.5 ms