RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 CDC42SE1Q9NRR8 79 aa5.7□□□□□ -1.5
MBD1-207ENST00000398488 KRTAP25-1Q3LHN0 102 aa5.66□□□□□ -1.5
MBD1-207ENST00000398488 PRO0628Q9UI54 55 aa5.65□□□□□ -1.5
MBD1-207ENST00000398488 MT1LQ93083 61 aa5.64□□□□□ -1.51
MBD1-207ENST00000398488 LCE3BQ5TA77 95 aa5.64□□□□□ -1.51
MBD1-207ENST00000398488 KRTAP2-2Q9BYT5 123 aa5.61□□□□□ -1.51
MBD1-207ENST00000398488 KRTAP2-1Q9BYU5 128 aa5.61□□□□□ -1.51
MBD1-207ENST00000398488 MT1GP13640 62 aa5.59□□□□□ -1.51
MBD1-207ENST00000398488 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
MBD1-207ENST00000398488 MT1MQ8N339 61 aa5.56□□□□□ -1.52
MBD1-207ENST00000398488 DSTQ03001 7570 aaKnown RBP5.55□□□□□ -1.52
MBD1-207ENST00000398488 ROMO1P60602 79 aa5.51□□□□□ -1.53
MBD1-207ENST00000398488 KRTAP4-3Q9BYR4 195 aa5.49□□□□□ -1.53
MBD1-207ENST00000398488 PP632Q6XCG6 107 aa5.48□□□□□ -1.53
MBD1-207ENST00000398488 KRTAP4-7Q9BYR0 210 aa5.46□□□□□ -1.54
MBD1-207ENST00000398488 KRTAP23-1A1A580 65 aa5.45□□□□□ -1.54
MBD1-207ENST00000398488 PMAIP1Q13794 54 aa5.43□□□□□ -1.54
MBD1-207ENST00000398488 KRTAP15-1Q3LI76 137 aa5.3□□□□□ -1.56
MBD1-207ENST00000398488 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
MBD1-207ENST00000398488 KTN1-AS1Q86SY8 53 aa5.23□□□□□ -1.57
MBD1-207ENST00000398488 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
MBD1-207ENST00000398488 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
MBD1-207ENST00000398488 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.58
MBD1-207ENST00000398488 KRTAP5-4Q6L8H1 288 aa5.13□□□□□ -1.59
MBD1-207ENST00000398488 PRAC1Q96KF2 57 aa5.13□□□□□ -1.59
MBD1-207ENST00000398488 LCE1DQ5T752 114 aa5.12□□□□□ -1.59
MBD1-207ENST00000398488 LCE4AQ5TA78 99 aa5.12□□□□□ -1.59
MBD1-207ENST00000398488 MT4P47944 62 aa5.09□□□□□ -1.59
MBD1-207ENST00000398488 KRTAP5-5Q701N2 237 aaPredicted RBP5.08□□□□□ -1.6
MBD1-207ENST00000398488 HMCN1Q96RW7 5635 aa5.06□□□□□ -1.6
MBD1-207ENST00000398488 KRTAP4-6Q9BYQ5 205 aa5.02□□□□□ -1.61
MBD1-207ENST00000398488 KRTAP9-6A8MVA2 160 aa4.97□□□□□ -1.61
MBD1-207ENST00000398488 SYNE1Q8NF91 8797 aaKnown RBP4.92□□□□□ -1.62
MBD1-207ENST00000398488 GPR98Q8WXG9 6306 aa4.87□□□□□ -1.63
MBD1-207ENST00000398488 KRTAP20-2Q3LI61 65 aa4.82□□□□□ -1.64
MBD1-207ENST00000398488 AHNAK2Q8IVF2 5795 aa4.81□□□□□ -1.64
MBD1-207ENST00000398488 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
MBD1-207ENST00000398488 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
MBD1-207ENST00000398488 SPRR5A0A1B0GTR4 108 aa4.78□□□□□ -1.64
MBD1-207ENST00000398488 MT1AP04731 61 aa4.78□□□□□ -1.64
MBD1-207ENST00000398488 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
MBD1-207ENST00000398488 KRTAP5-10Q6L8G5 202 aa4.61□□□□□ -1.67
MBD1-207ENST00000398488 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
MBD1-207ENST00000398488 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
MBD1-207ENST00000398488 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
MBD1-207ENST00000398488 H3BS24 57 aa4.43□□□□□ -1.7
MBD1-207ENST00000398488 KRTAP5-7Q6L8G8 165 aa4.36□□□□□ -1.71
MBD1-207ENST00000398488 MT3P25713 68 aa4.33□□□□□ -1.72
MBD1-207ENST00000398488 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
MBD1-207ENST00000398488 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
MBD1-207ENST00000398488 KRTAP5-8O75690 187 aa4.21□□□□□ -1.74
MBD1-207ENST00000398488 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
MBD1-207ENST00000398488 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
MBD1-207ENST00000398488 LUZP6Q538Z0 58 aa4.07□□□□□ -1.76
MBD1-207ENST00000398488 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
MBD1-207ENST00000398488 MUC5ACP98088 5654 aa3.99□□□□□ -1.77
MBD1-207ENST00000398488 LCE1EQ5T753 118 aa3.9□□□□□ -1.78
MBD1-207ENST00000398488 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
MBD1-207ENST00000398488 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
MBD1-207ENST00000398488 KRTAP9-9Q9BYP9 154 aa3.86□□□□□ -1.79
MBD1-207ENST00000398488 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
MBD1-207ENST00000398488 KRTAP4-2Q9BYR5 136 aa3.75□□□□□ -1.81
MBD1-207ENST00000398488 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
MBD1-207ENST00000398488 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
MBD1-207ENST00000398488 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
MBD1-207ENST00000398488 INE1O15225 51 aa3.38□□□□□ -1.87
MBD1-207ENST00000398488 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
MBD1-207ENST00000398488 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
MBD1-207ENST00000398488 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
MBD1-207ENST00000398488 KRTAP21-2Q3LI59 83 aa3.15□□□□□ -1.9
MBD1-207ENST00000398488 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
MBD1-207ENST00000398488 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
MBD1-207ENST00000398488 PRM1P04553 51 aa2.87□□□□□ -1.95
MBD1-207ENST00000398488 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
MBD1-207ENST00000398488 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
MBD1-207ENST00000398488 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
MBD1-207ENST00000398488 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 148.7 ms