RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 SYNE2Q8WXH0 6885 aaKnown RBP1.57□□□□□ -2.16
FNDC3A-202ENST00000398316 MT1XP80297 61 aa1.57□□□□□ -2.16
FNDC3A-202ENST00000398316 KRTAP8-1Q8IUC2 63 aa1.55□□□□□ -2.16
FNDC3A-202ENST00000398316 KRTAP13-4Q3LI77 160 aa1.55□□□□□ -2.16
FNDC3A-202ENST00000398316 KRTAP12-1P59990 96 aa1.53□□□□□ -2.16
FNDC3A-202ENST00000398316 KRTAP6-3Q3LI67 103 aa1.5□□□□□ -2.17
FNDC3A-202ENST00000398316 KRTAP4-9Q9BYQ8 210 aa1.5□□□□□ -2.17
FNDC3A-202ENST00000398316 SPRR5A0A1B0GTR4 108 aa1.49□□□□□ -2.17
FNDC3A-202ENST00000398316 SPRR2FQ96RM1 72 aa1.48□□□□□ -2.17
FNDC3A-202ENST00000398316 SPRR2EP22531 72 aa1.48□□□□□ -2.17
FNDC3A-202ENST00000398316 SPRR2BP35325 72 aa1.48□□□□□ -2.17
FNDC3A-202ENST00000398316 SPRR2AP35326 72 aa1.48□□□□□ -2.17
FNDC3A-202ENST00000398316 LCE1AQ5T7P2 110 aa1.47□□□□□ -2.17
FNDC3A-202ENST00000398316 MACF1Q9UPN3 7388 aaKnown RBP1.45□□□□□ -2.18
FNDC3A-202ENST00000398316 NEBP20929 6669 aa1.44□□□□□ -2.18
FNDC3A-202ENST00000398316 FCGBPQ9Y6R7 5405 aaPredicted RBP1.44□□□□□ -2.18
FNDC3A-202ENST00000398316 KRTAP2-3P0C7H8 128 aa1.43□□□□□ -2.18
FNDC3A-202ENST00000398316 SPRR2DP22532 72 aa1.43□□□□□ -2.18
FNDC3A-202ENST00000398316 KRTAP2-4Q9BYR9 128 aa1.43□□□□□ -2.18
FNDC3A-202ENST00000398316 KRTAP19-7Q3SYF9 63 aa1.43□□□□□ -2.18
FNDC3A-202ENST00000398316 KMT2DO14686 5537 aa1.4□□□□□ -2.18
FNDC3A-202ENST00000398316 LCE3BQ5TA77 95 aa1.4□□□□□ -2.19
FNDC3A-202ENST00000398316 LCE5AQ5TCM9 118 aa1.4□□□□□ -2.19
FNDC3A-202ENST00000398316 MT1EP04732 61 aa1.39□□□□□ -2.19
FNDC3A-202ENST00000398316 GPR98Q8WXG9 6306 aa1.39□□□□□ -2.19
FNDC3A-202ENST00000398316 KRTAP12-4P60329 112 aa1.37□□□□□ -2.19
FNDC3A-202ENST00000398316 KRTAP2-2Q9BYT5 123 aa1.37□□□□□ -2.19
FNDC3A-202ENST00000398316 KRTAP2-1Q9BYU5 128 aa1.37□□□□□ -2.19
FNDC3A-202ENST00000398316 KRTAP5-5Q701N2 237 aaPredicted RBP1.36□□□□□ -2.19
FNDC3A-202ENST00000398316 KRTAP5-4Q6L8H1 288 aa1.36□□□□□ -2.19
FNDC3A-202ENST00000398316 KRTAP12-3P60328 96 aa1.36□□□□□ -2.19
FNDC3A-202ENST00000398316 MT1LQ93083 61 aa1.34□□□□□ -2.19
FNDC3A-202ENST00000398316 MT1GP13640 62 aa1.34□□□□□ -2.19
FNDC3A-202ENST00000398316 KRTAP19-3Q7Z4W3 81 aa1.33□□□□□ -2.2
FNDC3A-202ENST00000398316 KRTAP4-11Q9BYQ6 195 aa1.33□□□□□ -2.2
FNDC3A-202ENST00000398316 MUC12Q9UKN1 5478 aa1.32□□□□□ -2.2
FNDC3A-202ENST00000398316 MT4P47944 62 aa1.32□□□□□ -2.2
FNDC3A-202ENST00000398316 DSTQ03001 7570 aaKnown RBP1.32□□□□□ -2.2
FNDC3A-202ENST00000398316 KRTAP19-5Q3LI72 72 aa1.3□□□□□ -2.2
FNDC3A-202ENST00000398316 MT1MQ8N339 61 aa1.3□□□□□ -2.2
FNDC3A-202ENST00000398316 LCE3AQ5TA76 89 aa1.29□□□□□ -2.2
FNDC3A-202ENST00000398316 LCE3CQ5T5A8 94 aa1.26□□□□□ -2.21
FNDC3A-202ENST00000398316 LCE4AQ5TA78 99 aa1.25□□□□□ -2.21
FNDC3A-202ENST00000398316 SYNE1Q8NF91 8797 aaKnown RBP1.24□□□□□ -2.21
FNDC3A-202ENST00000398316 MDN1Q9NU22 5596 aa1.21□□□□□ -2.21
FNDC3A-202ENST00000398316 MUC5BQ9HC84 5762 aaPredicted RBP1.2□□□□□ -2.22
FNDC3A-202ENST00000398316 MT1AP04731 61 aa1.19□□□□□ -2.22
FNDC3A-202ENST00000398316 KRTAP4-4Q9BYR3 166 aa1.19□□□□□ -2.22
FNDC3A-202ENST00000398316 LCE1DQ5T752 114 aa1.19□□□□□ -2.22
FNDC3A-202ENST00000398316 KRTAP9-6A8MVA2 160 aa1.17□□□□□ -2.22
FNDC3A-202ENST00000398316 KRTAP5-7Q6L8G8 165 aa1.16□□□□□ -2.22
FNDC3A-202ENST00000398316 LCE1CQ5T751 118 aa1.14□□□□□ -2.23
FNDC3A-202ENST00000398316 LCE1EQ5T753 118 aa1.14□□□□□ -2.23
FNDC3A-202ENST00000398316 LCE1FQ5T754 118 aa1.14□□□□□ -2.23
FNDC3A-202ENST00000398316 LCE3EQ5T5B0 92 aa1.14□□□□□ -2.23
FNDC3A-202ENST00000398316 KRTAP5-11Q6L8G4 156 aa1.14□□□□□ -2.23
FNDC3A-202ENST00000398316 MT3P25713 68 aa1.13□□□□□ -2.23
FNDC3A-202ENST00000398316 LCE1BQ5T7P3 118 aa1.13□□□□□ -2.23
FNDC3A-202ENST00000398316 LCE3DQ9BYE3 92 aa1.12□□□□□ -2.23
FNDC3A-202ENST00000398316 KRTAP5-8O75690 187 aa1.11□□□□□ -2.23
FNDC3A-202ENST00000398316 PRM1P04553 51 aa1.11□□□□□ -2.23
FNDC3A-202ENST00000398316 KRTAP20-2Q3LI61 65 aa1.1□□□□□ -2.23
FNDC3A-202ENST00000398316 AHNAK2Q8IVF2 5795 aa1.1□□□□□ -2.23
FNDC3A-202ENST00000398316 KRTAP5-10Q6L8G5 202 aa1.07□□□□□ -2.24
FNDC3A-202ENST00000398316 OBSCNQ5VST9 7968 aa1.06□□□□□ -2.24
FNDC3A-202ENST00000398316 KRTAP6-1Q3LI64 71 aa1.06□□□□□ -2.24
FNDC3A-202ENST00000398316 KRTAP4-3Q9BYR4 195 aa1.05□□□□□ -2.24
FNDC3A-202ENST00000398316 HMCN1Q96RW7 5635 aa1.02□□□□□ -2.25
FNDC3A-202ENST00000398316 AHNAKQ09666 5890 aaKnown RBP1.01□□□□□ -2.25
FNDC3A-202ENST00000398316 KRTAP5-1Q6L8H4 278 aa1□□□□□ -2.25
FNDC3A-202ENST00000398316 MUC19Q7Z5P9 8384 aa0.98□□□□□ -2.25
FNDC3A-202ENST00000398316 KRTAP6-2Q3LI66 62 aa0.94□□□□□ -2.26
FNDC3A-202ENST00000398316 MUC5ACP98088 5654 aa0.9□□□□□ -2.27
FNDC3A-202ENST00000398316 PHGR1C9JFL3 82 aa0.81□□□□□ -2.28
FNDC3A-202ENST00000398316 KRTAP21-2Q3LI59 83 aa0.81□□□□□ -2.28
FNDC3A-202ENST00000398316 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
FNDC3A-202ENST00000398316 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 120 ms