RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 CHKB-CPT1BH3BT56 60 aa1.65□□□□□ -2.15
UBE3A-202ENST00000397954 PLAC4Q8WY50 150 aa1.65□□□□□ -2.15
UBE3A-202ENST00000397954 COA5Q86WW8 74 aa1.64□□□□□ -2.15
UBE3A-202ENST00000397954 MT1BP07438 61 aa1.63□□□□□ -2.15
UBE3A-202ENST00000397954 LINC01558Q9Y6Z2 57 aa1.63□□□□□ -2.15
UBE3A-202ENST00000397954 PRR15LQ9BU68 103 aa1.61□□□□□ -2.15
UBE3A-202ENST00000397954 LCE1EQ5T753 118 aa1.6□□□□□ -2.15
UBE3A-202ENST00000397954 SSPOA2VEC9 5147 aa1.6□□□□□ -2.15
UBE3A-202ENST00000397954 OBSCNQ5VST9 7968 aa1.59□□□□□ -2.15
UBE3A-202ENST00000397954 SPRR5A0A1B0GTR4 108 aa1.59□□□□□ -2.16
UBE3A-202ENST00000397954 USH2AO75445 5202 aa1.57□□□□□ -2.16
UBE3A-202ENST00000397954 UQCR11O14957 56 aa1.56□□□□□ -2.16
UBE3A-202ENST00000397954 SPATA8Q6RVD6 105 aa1.56□□□□□ -2.16
UBE3A-202ENST00000397954 SNURFQ9Y675 71 aa1.56□□□□□ -2.16
UBE3A-202ENST00000397954 KRTAP5-8O75690 187 aa1.55□□□□□ -2.16
UBE3A-202ENST00000397954 LCE3DQ9BYE3 92 aa1.55□□□□□ -2.16
UBE3A-202ENST00000397954 C10orf95Q9H7T3 257 aa1.54□□□□□ -2.16
UBE3A-202ENST00000397954 MT1XP80297 61 aa1.53□□□□□ -2.16
UBE3A-202ENST00000397954 KRTAP13-4Q3LI77 160 aa1.53□□□□□ -2.16
UBE3A-202ENST00000397954 A0A1B0GU69 56 aa1.53□□□□□ -2.16
UBE3A-202ENST00000397954 INE1O15225 51 aa1.5□□□□□ -2.17
UBE3A-202ENST00000397954 KRTAP12-1P59990 96 aa1.5□□□□□ -2.17
UBE3A-202ENST00000397954 FCGBPQ9Y6R7 5405 aaPredicted RBP1.5□□□□□ -2.17
UBE3A-202ENST00000397954 KRTAP10-7P60409 375 aaPredicted RBP1.5□□□□□ -2.17
UBE3A-202ENST00000397954 KRTAP2-3P0C7H8 128 aa1.49□□□□□ -2.17
UBE3A-202ENST00000397954 KRTAP8-1Q8IUC2 63 aa1.49□□□□□ -2.17
UBE3A-202ENST00000397954 KRTAP2-4Q9BYR9 128 aa1.49□□□□□ -2.17
UBE3A-202ENST00000397954 TNP1P09430 55 aa1.47□□□□□ -2.17
UBE3A-202ENST00000397954 KRTAP20-1Q3LI63 56 aa1.47□□□□□ -2.17
UBE3A-202ENST00000397954 PP632Q6XCG6 107 aa1.44□□□□□ -2.18
UBE3A-202ENST00000397954 KRTAP2-1Q9BYU5 128 aa1.44□□□□□ -2.18
UBE3A-202ENST00000397954 SPRR2EP22531 72 aa1.43□□□□□ -2.18
UBE3A-202ENST00000397954 SPRR2BP35325 72 aa1.43□□□□□ -2.18
UBE3A-202ENST00000397954 SPRR2AP35326 72 aa1.43□□□□□ -2.18
UBE3A-202ENST00000397954 KRTAP4-3Q9BYR4 195 aa1.43□□□□□ -2.18
UBE3A-202ENST00000397954 SPRR2FQ96RM1 72 aa1.42□□□□□ -2.18
UBE3A-202ENST00000397954 NEBP20929 6669 aa1.41□□□□□ -2.18
UBE3A-202ENST00000397954 MT1GP13640 62 aa1.41□□□□□ -2.18
UBE3A-202ENST00000397954 SPRR2DP22532 72 aa1.4□□□□□ -2.19
UBE3A-202ENST00000397954 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.19
UBE3A-202ENST00000397954 KRTAP19-3Q7Z4W3 81 aa1.4□□□□□ -2.19
UBE3A-202ENST00000397954 MT1EP04732 61 aa1.39□□□□□ -2.19
UBE3A-202ENST00000397954 A0A0D9SG42 100 aa1.37□□□□□ -2.19
UBE3A-202ENST00000397954 KRTAP19-7Q3SYF9 63 aa1.37□□□□□ -2.19
UBE3A-202ENST00000397954 MACF1Q9UPN3 7388 aaKnown RBP1.36□□□□□ -2.19
UBE3A-202ENST00000397954 KRTAP9-6A8MVA2 160 aa1.36□□□□□ -2.19
UBE3A-202ENST00000397954 KRTAP5-7Q6L8G8 165 aa1.34□□□□□ -2.2
UBE3A-202ENST00000397954 MT1LQ93083 61 aa1.33□□□□□ -2.2
UBE3A-202ENST00000397954 KRTAP12-3P60328 96 aa1.32□□□□□ -2.2
UBE3A-202ENST00000397954 KRTAP19-5Q3LI72 72 aa1.32□□□□□ -2.2
UBE3A-202ENST00000397954 MT1MQ8N339 61 aa1.31□□□□□ -2.2
UBE3A-202ENST00000397954 LCE3AQ5TA76 89 aa1.3□□□□□ -2.2
UBE3A-202ENST00000397954 SYNE2Q8WXH0 6885 aaKnown RBP1.27□□□□□ -2.21
UBE3A-202ENST00000397954 KRTAP12-4P60329 112 aa1.26□□□□□ -2.21
UBE3A-202ENST00000397954 KMT2DO14686 5537 aa1.26□□□□□ -2.21
UBE3A-202ENST00000397954 MDN1Q9NU22 5596 aa1.26□□□□□ -2.21
UBE3A-202ENST00000397954 FSIP2Q5CZC0 6907 aa1.25□□□□□ -2.21
UBE3A-202ENST00000397954 MUC12Q9UKN1 5478 aa1.25□□□□□ -2.21
UBE3A-202ENST00000397954 KRTAP5-5Q701N2 237 aaPredicted RBP1.25□□□□□ -2.21
UBE3A-202ENST00000397954 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
UBE3A-202ENST00000397954 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
UBE3A-202ENST00000397954 MT1AP04731 61 aa1.19□□□□□ -2.22
UBE3A-202ENST00000397954 KRTAP20-2Q3LI61 65 aa1.17□□□□□ -2.22
UBE3A-202ENST00000397954 MT4P47944 62 aa1.1□□□□□ -2.23
UBE3A-202ENST00000397954 MUC5ACP98088 5654 aa1.1□□□□□ -2.23
UBE3A-202ENST00000397954 KRTAP6-1Q3LI64 71 aa1.06□□□□□ -2.24
UBE3A-202ENST00000397954 KRTAP6-2Q3LI66 62 aa1□□□□□ -2.25
UBE3A-202ENST00000397954 LCE1CQ5T751 118 aa0.98□□□□□ -2.25
UBE3A-202ENST00000397954 LCE1BQ5T7P3 118 aa0.98□□□□□ -2.25
UBE3A-202ENST00000397954 MUC19Q7Z5P9 8384 aa0.96□□□□□ -2.26
UBE3A-202ENST00000397954 DSTQ03001 7570 aaKnown RBP0.94□□□□□ -2.26
UBE3A-202ENST00000397954 SYNE1Q8NF91 8797 aaKnown RBP0.9□□□□□ -2.26
UBE3A-202ENST00000397954 KRTAP21-2Q3LI59 83 aa0.74□□□□□ -2.29
UBE3A-202ENST00000397954 PHGR1C9JFL3 82 aa0.72□□□□□ -2.29
UBE3A-202ENST00000397954 PRM1P04553 51 aa0.67□□□□□ -2.3
UBE3A-202ENST00000397954 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
UBE3A-202ENST00000397954 MUC16Q8WXI7 14507 aa0.5□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 72.6 ms