RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 KRTAP12-3P60328 96 aa7.09□□□□□ -1.27
MAP1LC3A-203ENST00000397709 KRTAP19-3Q7Z4W3 81 aa7□□□□□ -1.29
MAP1LC3A-203ENST00000397709 MT1LQ93083 61 aa6.97□□□□□ -1.29
MAP1LC3A-203ENST00000397709 LCE5AQ5TCM9 118 aa6.94□□□□□ -1.3
MAP1LC3A-203ENST00000397709 MT1GP13640 62 aa6.89□□□□□ -1.31
MAP1LC3A-203ENST00000397709 SPRR2DP22532 72 aa6.86□□□□□ -1.31
MAP1LC3A-203ENST00000397709 KRTAP20-1Q3LI63 56 aa6.86□□□□□ -1.31
MAP1LC3A-203ENST00000397709 KRTAP15-1Q3LI76 137 aa6.83□□□□□ -1.32
MAP1LC3A-203ENST00000397709 PRAC1Q96KF2 57 aa6.82□□□□□ -1.32
MAP1LC3A-203ENST00000397709 MT1MQ8N339 61 aa6.8□□□□□ -1.32
MAP1LC3A-203ENST00000397709 KRTAP2-3P0C7H8 128 aa6.78□□□□□ -1.32
MAP1LC3A-203ENST00000397709 KRTAP2-4Q9BYR9 128 aa6.78□□□□□ -1.32
MAP1LC3A-203ENST00000397709 KTN1-AS1Q86SY8 53 aa6.77□□□□□ -1.33
MAP1LC3A-203ENST00000397709 KRTAP19-4Q3LI73 84 aa6.73□□□□□ -1.33
MAP1LC3A-203ENST00000397709 KRTAP4-7Q9BYR0 210 aa6.65□□□□□ -1.34
MAP1LC3A-203ENST00000397709 LCE3BQ5TA77 95 aa6.63□□□□□ -1.35
MAP1LC3A-203ENST00000397709 KRTAP4-3Q9BYR4 195 aa6.61□□□□□ -1.35
MAP1LC3A-203ENST00000397709 LCE3CQ5T5A8 94 aa6.59□□□□□ -1.35
MAP1LC3A-203ENST00000397709 KRTAP2-2Q9BYT5 123 aa6.58□□□□□ -1.36
MAP1LC3A-203ENST00000397709 KRTAP2-1Q9BYU5 128 aa6.58□□□□□ -1.36
MAP1LC3A-203ENST00000397709 DSTQ03001 7570 aaKnown RBP6.44□□□□□ -1.38
MAP1LC3A-203ENST00000397709 SVIPQ8NHG7 77 aa6.37□□□□□ -1.39
MAP1LC3A-203ENST00000397709 LOC100996750A0A140TA64 210 aa6.27□□□□□ -1.41
MAP1LC3A-203ENST00000397709 KRTAP9-6A8MVA2 160 aa6.23□□□□□ -1.41
MAP1LC3A-203ENST00000397709 KRTAP5-5Q701N2 237 aaPredicted RBP6.19□□□□□ -1.42
MAP1LC3A-203ENST00000397709 KRTAP5-4Q6L8H1 288 aa6.14□□□□□ -1.43
MAP1LC3A-203ENST00000397709 SPRR5A0A1B0GTR4 108 aa6.12□□□□□ -1.43
MAP1LC3A-203ENST00000397709 LCE4AQ5TA78 99 aa6.12□□□□□ -1.43
MAP1LC3A-203ENST00000397709 KRTAP4-9Q9BYQ8 210 aa6□□□□□ -1.45
MAP1LC3A-203ENST00000397709 MT4P47944 62 aa5.95□□□□□ -1.46
MAP1LC3A-203ENST00000397709 LCE1DQ5T752 114 aa5.95□□□□□ -1.46
MAP1LC3A-203ENST00000397709 MT1AP04731 61 aa5.94□□□□□ -1.46
MAP1LC3A-203ENST00000397709 HMCN1Q96RW7 5635 aa5.87□□□□□ -1.47
MAP1LC3A-203ENST00000397709 KRTAP6-1Q3LI64 71 aa5.87□□□□□ -1.47
MAP1LC3A-203ENST00000397709 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
MAP1LC3A-203ENST00000397709 SYNE1Q8NF91 8797 aaKnown RBP5.86□□□□□ -1.47
MAP1LC3A-203ENST00000397709 KRTAP12-4P60329 112 aa5.83□□□□□ -1.48
MAP1LC3A-203ENST00000397709 KRTAP20-2Q3LI61 65 aa5.74□□□□□ -1.49
MAP1LC3A-203ENST00000397709 KRTAP9-4Q9BYQ2 154 aa5.67□□□□□ -1.5
MAP1LC3A-203ENST00000397709 LUZP6Q538Z0 58 aa5.61□□□□□ -1.51
MAP1LC3A-203ENST00000397709 KRTAP5-3Q6L8H2 238 aa5.56□□□□□ -1.52
MAP1LC3A-203ENST00000397709 KRTAP5-2Q701N4 177 aa5.49□□□□□ -1.53
MAP1LC3A-203ENST00000397709 GPR98Q8WXG9 6306 aa5.49□□□□□ -1.53
MAP1LC3A-203ENST00000397709 KRTAP6-2Q3LI66 62 aa5.48□□□□□ -1.53
MAP1LC3A-203ENST00000397709 AHNAK2Q8IVF2 5795 aa5.44□□□□□ -1.54
MAP1LC3A-203ENST00000397709 MT3P25713 68 aa5.39□□□□□ -1.55
MAP1LC3A-203ENST00000397709 KRTAP5-10Q6L8G5 202 aa5.33□□□□□ -1.56
MAP1LC3A-203ENST00000397709 NDUFAF8A1L188 74 aa5.14□□□□□ -1.59
MAP1LC3A-203ENST00000397709 KRTAP5-7Q6L8G8 165 aa5.11□□□□□ -1.59
MAP1LC3A-203ENST00000397709 KRTAP4-11Q9BYQ6 195 aa5.08□□□□□ -1.6
MAP1LC3A-203ENST00000397709 KRTAP5-8O75690 187 aa4.91□□□□□ -1.62
MAP1LC3A-203ENST00000397709 OBSCNQ5VST9 7968 aa4.87□□□□□ -1.63
MAP1LC3A-203ENST00000397709 LCE3DQ9BYE3 92 aa4.86□□□□□ -1.63
MAP1LC3A-203ENST00000397709 LCE1EQ5T753 118 aa4.81□□□□□ -1.64
MAP1LC3A-203ENST00000397709 KRTAP5-1Q6L8H4 278 aa4.8□□□□□ -1.64
MAP1LC3A-203ENST00000397709 MUC5ACP98088 5654 aa4.69□□□□□ -1.66
MAP1LC3A-203ENST00000397709 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
MAP1LC3A-203ENST00000397709 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
MAP1LC3A-203ENST00000397709 KRTAP4-2Q9BYR5 136 aa4.51□□□□□ -1.69
MAP1LC3A-203ENST00000397709 LCE1CQ5T751 118 aa4.46□□□□□ -1.7
MAP1LC3A-203ENST00000397709 LCE1BQ5T7P3 118 aa4.46□□□□□ -1.7
MAP1LC3A-203ENST00000397709 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
MAP1LC3A-203ENST00000397709 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
MAP1LC3A-203ENST00000397709 AHNAKQ09666 5890 aaKnown RBP4.36□□□□□ -1.71
MAP1LC3A-203ENST00000397709 INE1O15225 51 aa4.24□□□□□ -1.73
MAP1LC3A-203ENST00000397709 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
MAP1LC3A-203ENST00000397709 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
MAP1LC3A-203ENST00000397709 KRTAP21-2Q3LI59 83 aa3.87□□□□□ -1.79
MAP1LC3A-203ENST00000397709 PRM1P04553 51 aa3.86□□□□□ -1.79
MAP1LC3A-203ENST00000397709 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
MAP1LC3A-203ENST00000397709 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
MAP1LC3A-203ENST00000397709 H3BS24 57 aa3.61□□□□□ -1.83
MAP1LC3A-203ENST00000397709 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
MAP1LC3A-203ENST00000397709 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
MAP1LC3A-203ENST00000397709 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
MAP1LC3A-203ENST00000397709 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
MAP1LC3A-203ENST00000397709 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms