RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CDC42SE1Q9NRR8 79 aa9.23□□□□□ -0.93
TSPAN4-207ENST00000397411 LCE3BQ5TA77 95 aa9.22□□□□□ -0.93
TSPAN4-207ENST00000397411 LCE5AQ5TCM9 118 aa9.19□□□□□ -0.94
TSPAN4-207ENST00000397411 MT1GP13640 62 aa9.1□□□□□ -0.95
TSPAN4-207ENST00000397411 PP632Q6XCG6 107 aa9.08□□□□□ -0.96
TSPAN4-207ENST00000397411 MT1LQ93083 61 aa9.03□□□□□ -0.96
TSPAN4-207ENST00000397411 KRTAP12-3P60328 96 aa9.02□□□□□ -0.97
TSPAN4-207ENST00000397411 ROMO1P60602 79 aa8.97□□□□□ -0.97
TSPAN4-207ENST00000397411 KRTAP23-1A1A580 65 aa8.92□□□□□ -0.98
TSPAN4-207ENST00000397411 MT1MQ8N339 61 aa8.92□□□□□ -0.98
TSPAN4-207ENST00000397411 DSTQ03001 7570 aaKnown RBP8.81□□□□□ -1
TSPAN4-207ENST00000397411 BRK1Q8WUW1 75 aa8.73□□□□□ -1.01
TSPAN4-207ENST00000397411 KRTAP4-3Q9BYR4 195 aa8.7□□□□□ -1.02
TSPAN4-207ENST00000397411 KRTAP4-7Q9BYR0 210 aa8.62□□□□□ -1.03
TSPAN4-207ENST00000397411 KRTAP19-4Q3LI73 84 aa8.59□□□□□ -1.03
TSPAN4-207ENST00000397411 KRTAP15-1Q3LI76 137 aa8.56□□□□□ -1.04
TSPAN4-207ENST00000397411 KRTAP4-9Q9BYQ8 210 aa8.47□□□□□ -1.05
TSPAN4-207ENST00000397411 LCE4AQ5TA78 99 aa8.41□□□□□ -1.06
TSPAN4-207ENST00000397411 LCE3CQ5T5A8 94 aa8.33□□□□□ -1.08
TSPAN4-207ENST00000397411 MT4P47944 62 aa8.3□□□□□ -1.08
TSPAN4-207ENST00000397411 LCE1DQ5T752 114 aa8.29□□□□□ -1.08
TSPAN4-207ENST00000397411 PMAIP1Q13794 54 aa8.25□□□□□ -1.09
TSPAN4-207ENST00000397411 KRTAP5-4Q6L8H1 288 aa8.24□□□□□ -1.09
TSPAN4-207ENST00000397411 LOC100996750A0A140TA64 210 aa8.15□□□□□ -1.1
TSPAN4-207ENST00000397411 KRTAP5-5Q701N2 237 aaPredicted RBP8.08□□□□□ -1.12
TSPAN4-207ENST00000397411 KRTAP4-6Q9BYQ5 205 aa8.05□□□□□ -1.12
TSPAN4-207ENST00000397411 HMCN1Q96RW7 5635 aa8.03□□□□□ -1.12
TSPAN4-207ENST00000397411 PRO0628Q9UI54 55 aa8.02□□□□□ -1.13
TSPAN4-207ENST00000397411 KRTAP12-4P60329 112 aa7.93□□□□□ -1.14
TSPAN4-207ENST00000397411 GPR98Q8WXG9 6306 aa7.85□□□□□ -1.15
TSPAN4-207ENST00000397411 SPRR5A0A1B0GTR4 108 aa7.81□□□□□ -1.16
TSPAN4-207ENST00000397411 KRTAP20-2Q3LI61 65 aa7.79□□□□□ -1.16
TSPAN4-207ENST00000397411 KRTAP9-6A8MVA2 160 aa7.76□□□□□ -1.17
TSPAN4-207ENST00000397411 PRAC1Q96KF2 57 aa7.71□□□□□ -1.18
TSPAN4-207ENST00000397411 MT1AP04731 61 aa7.7□□□□□ -1.18
TSPAN4-207ENST00000397411 SYNE1Q8NF91 8797 aaKnown RBP7.69□□□□□ -1.18
TSPAN4-207ENST00000397411 AHNAK2Q8IVF2 5795 aa7.67□□□□□ -1.18
TSPAN4-207ENST00000397411 KRTAP6-1Q3LI64 71 aa7.63□□□□□ -1.19
TSPAN4-207ENST00000397411 KTN1-AS1Q86SY8 53 aa7.58□□□□□ -1.2
TSPAN4-207ENST00000397411 KRTAP5-3Q6L8H2 238 aa7.52□□□□□ -1.21
TSPAN4-207ENST00000397411 KRTAP5-10Q6L8G5 202 aa7.46□□□□□ -1.22
TSPAN4-207ENST00000397411 KRTAP9-4Q9BYQ2 154 aa7.43□□□□□ -1.22
TSPAN4-207ENST00000397411 KRTAP5-2Q701N4 177 aa7.27□□□□□ -1.25
TSPAN4-207ENST00000397411 SVIPQ8NHG7 77 aa7.25□□□□□ -1.25
TSPAN4-207ENST00000397411 KRTAP6-2Q3LI66 62 aa7.24□□□□□ -1.25
TSPAN4-207ENST00000397411 KRTAP5-7Q6L8G8 165 aa7.14□□□□□ -1.27
TSPAN4-207ENST00000397411 MT3P25713 68 aa7.08□□□□□ -1.28
TSPAN4-207ENST00000397411 KRTAP4-11Q9BYQ6 195 aa7.04□□□□□ -1.28
TSPAN4-207ENST00000397411 KRTAP5-8O75690 187 aa6.76□□□□□ -1.33
TSPAN4-207ENST00000397411 OBSCNQ5VST9 7968 aa6.69□□□□□ -1.34
TSPAN4-207ENST00000397411 LUZP6Q538Z0 58 aa6.67□□□□□ -1.34
TSPAN4-207ENST00000397411 KRTAP5-1Q6L8H4 278 aa6.46□□□□□ -1.38
TSPAN4-207ENST00000397411 KRTAP9-9Q9BYP9 154 aa6.44□□□□□ -1.38
TSPAN4-207ENST00000397411 LCE1EQ5T753 118 aa6.36□□□□□ -1.39
TSPAN4-207ENST00000397411 MUC5ACP98088 5654 aa6.31□□□□□ -1.4
TSPAN4-207ENST00000397411 AHNAKQ09666 5890 aaKnown RBP6.23□□□□□ -1.41
TSPAN4-207ENST00000397411 MUC5BQ9HC84 5762 aaPredicted RBP6.2□□□□□ -1.42
TSPAN4-207ENST00000397411 LCE3DQ9BYE3 92 aa6.11□□□□□ -1.43
TSPAN4-207ENST00000397411 LCE1BQ5T7P3 118 aa6.05□□□□□ -1.44
TSPAN4-207ENST00000397411 KRTAP4-2Q9BYR5 136 aa5.94□□□□□ -1.46
TSPAN4-207ENST00000397411 LCE1CQ5T751 118 aa5.89□□□□□ -1.47
TSPAN4-207ENST00000397411 LCE3EQ5T5B0 92 aa5.81□□□□□ -1.48
TSPAN4-207ENST00000397411 NDUFAF8A1L188 74 aa5.65□□□□□ -1.5
TSPAN4-207ENST00000397411 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.37□□□□□ -1.55
TSPAN4-207ENST00000397411 KRTAP4-12Q9BQ66 201 aa5.34□□□□□ -1.55
TSPAN4-207ENST00000397411 KRTAP5-11Q6L8G4 156 aa5.28□□□□□ -1.56
TSPAN4-207ENST00000397411 LCE1FQ5T754 118 aa5.09□□□□□ -1.59
TSPAN4-207ENST00000397411 KRTAP21-2Q3LI59 83 aa4.98□□□□□ -1.61
TSPAN4-207ENST00000397411 A0A0A0MQY5 61 aa4.85□□□□□ -1.63
TSPAN4-207ENST00000397411 INE1O15225 51 aa4.73□□□□□ -1.65
TSPAN4-207ENST00000397411 KRTAP4-4Q9BYR3 166 aa4.59□□□□□ -1.67
TSPAN4-207ENST00000397411 PHGR1C9JFL3 82 aa4.56□□□□□ -1.68
TSPAN4-207ENST00000397411 PRM1P04553 51 aa4.56□□□□□ -1.68
TSPAN4-207ENST00000397411 MUC19Q7Z5P9 8384 aa4.12□□□□□ -1.75
TSPAN4-207ENST00000397411 KRTAP21-1Q3LI58 79 aa3.33□□□□□ -1.88
TSPAN4-207ENST00000397411 H3BS24 57 aa3.22□□□□□ -1.89
TSPAN4-207ENST00000397411 MUC16Q8WXI7 14507 aa2.97□□□□□ -1.93
Retrieved 77 of 20,778 RNA–protein pairs in 118.3 ms