RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 HMCN2Q8NDA2 5059 aa3.61□□□□□ -1.83
UCA1-201ENST00000397381 FAT4Q6V0I7 4981 aa3.54□□□□□ -1.84
UCA1-201ENST00000397381 KRTAP10-7P60409 375 aaPredicted RBP3.53□□□□□ -1.85
UCA1-201ENST00000397381 RNF213Q63HN8 5207 aa3.5□□□□□ -1.85
UCA1-201ENST00000397381 LCE3CQ5T5A8 94 aa3.46□□□□□ -1.85
UCA1-201ENST00000397381 KRTAP19-5Q3LI72 72 aa3.43□□□□□ -1.86
UCA1-201ENST00000397381 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
UCA1-201ENST00000397381 KRTAP2-3P0C7H8 128 aa3.31□□□□□ -1.88
UCA1-201ENST00000397381 KRTAP2-4Q9BYR9 128 aa3.31□□□□□ -1.88
UCA1-201ENST00000397381 KRTAP2-1Q9BYU5 128 aa3.31□□□□□ -1.88
UCA1-201ENST00000397381 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
UCA1-201ENST00000397381 CRCT1Q9UGL9 99 aa3.24□□□□□ -1.89
UCA1-201ENST00000397381 KRTAP19-7Q3SYF9 63 aa3.23□□□□□ -1.89
UCA1-201ENST00000397381 MT1LQ93083 61 aa3.17□□□□□ -1.9
UCA1-201ENST00000397381 MT1EP04732 61 aa3.14□□□□□ -1.91
UCA1-201ENST00000397381 KMT2DO14686 5537 aa3.11□□□□□ -1.91
UCA1-201ENST00000397381 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
UCA1-201ENST00000397381 USH2AO75445 5202 aa3.05□□□□□ -1.92
UCA1-201ENST00000397381 FSIP2Q5CZC0 6907 aa2.98□□□□□ -1.93
UCA1-201ENST00000397381 MT1GP13640 62 aa2.94□□□□□ -1.94
UCA1-201ENST00000397381 KRTAP12-4P60329 112 aa2.94□□□□□ -1.94
UCA1-201ENST00000397381 SSPOA2VEC9 5147 aa2.93□□□□□ -1.94
UCA1-201ENST00000397381 KRTAP19-6Q3LI70 58 aa2.93□□□□□ -1.94
UCA1-201ENST00000397381 KRTAP4-3Q9BYR4 195 aa2.93□□□□□ -1.94
UCA1-201ENST00000397381 MT1MQ8N339 61 aa2.92□□□□□ -1.94
UCA1-201ENST00000397381 KRTAP19-3Q7Z4W3 81 aa2.9□□□□□ -1.95
UCA1-201ENST00000397381 KRTAP2-2Q9BYT5 123 aa2.89□□□□□ -1.95
UCA1-201ENST00000397381 MT1AP04731 61 aa2.8□□□□□ -1.96
UCA1-201ENST00000397381 KRTAP6-3Q3LI67 103 aa2.78□□□□□ -1.96
UCA1-201ENST00000397381 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
UCA1-201ENST00000397381 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
UCA1-201ENST00000397381 FCGBPQ9Y6R7 5405 aaPredicted RBP2.75□□□□□ -1.97
UCA1-201ENST00000397381 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
UCA1-201ENST00000397381 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
UCA1-201ENST00000397381 MT3P25713 68 aa2.71□□□□□ -1.98
UCA1-201ENST00000397381 MUC12Q9UKN1 5478 aa2.7□□□□□ -1.98
UCA1-201ENST00000397381 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
UCA1-201ENST00000397381 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
UCA1-201ENST00000397381 NEBP20929 6669 aa2.68□□□□□ -1.98
UCA1-201ENST00000397381 SPRR2FQ96RM1 72 aa2.67□□□□□ -1.98
UCA1-201ENST00000397381 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
UCA1-201ENST00000397381 MACF1Q9UPN3 7388 aaKnown RBP2.66□□□□□ -1.98
UCA1-201ENST00000397381 SYNE2Q8WXH0 6885 aaKnown RBP2.66□□□□□ -1.98
UCA1-201ENST00000397381 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
UCA1-201ENST00000397381 PRM1P04553 51 aa2.62□□□□□ -1.99
UCA1-201ENST00000397381 SYNE1Q8NF91 8797 aaKnown RBP2.54□□□□□ -2
UCA1-201ENST00000397381 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
UCA1-201ENST00000397381 DSTQ03001 7570 aaKnown RBP2.51□□□□□ -2.01
UCA1-201ENST00000397381 GPR98Q8WXG9 6306 aa2.5□□□□□ -2.01
UCA1-201ENST00000397381 KRTAP6-2Q3LI66 62 aa2.49□□□□□ -2.01
UCA1-201ENST00000397381 KRTAP5-9P26371 169 aa2.48□□□□□ -2.01
UCA1-201ENST00000397381 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
UCA1-201ENST00000397381 MDN1Q9NU22 5596 aa2.39□□□□□ -2.03
UCA1-201ENST00000397381 SPRR2EP22531 72 aa2.39□□□□□ -2.03
UCA1-201ENST00000397381 SPRR2BP35325 72 aa2.39□□□□□ -2.03
UCA1-201ENST00000397381 SPRR2AP35326 72 aa2.39□□□□□ -2.03
UCA1-201ENST00000397381 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
UCA1-201ENST00000397381 KRTAP5-4Q6L8H1 288 aa2.3□□□□□ -2.04
UCA1-201ENST00000397381 SPRR2DP22532 72 aa2.28□□□□□ -2.04
UCA1-201ENST00000397381 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
UCA1-201ENST00000397381 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
UCA1-201ENST00000397381 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
UCA1-201ENST00000397381 KRTAP5-10Q6L8G5 202 aa2.14□□□□□ -2.07
UCA1-201ENST00000397381 OBSCNQ5VST9 7968 aa2.13□□□□□ -2.07
UCA1-201ENST00000397381 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
UCA1-201ENST00000397381 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
UCA1-201ENST00000397381 AHNAKQ09666 5890 aaKnown RBP2□□□□□ -2.09
UCA1-201ENST00000397381 MUC5ACP98088 5654 aa1.99□□□□□ -2.09
UCA1-201ENST00000397381 MT4P47944 62 aa1.98□□□□□ -2.09
UCA1-201ENST00000397381 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
UCA1-201ENST00000397381 LCE1CQ5T751 118 aa1.81□□□□□ -2.12
UCA1-201ENST00000397381 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
UCA1-201ENST00000397381 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
UCA1-201ENST00000397381 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
UCA1-201ENST00000397381 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.18
UCA1-201ENST00000397381 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
UCA1-201ENST00000397381 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 92 ms