RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 BIRC6Q9NR09 4857 aa5.23□□□□□ -1.57
MCF2L-208ENST00000397030 KRTAP9-7A8MTY7 169 aa5.22□□□□□ -1.57
MCF2L-208ENST00000397030 MUC17Q685J3 4493 aa5.21□□□□□ -1.58
MCF2L-208ENST00000397030 PCLOQ9Y6V0 5065 aa5.15□□□□□ -1.58
MCF2L-208ENST00000397030 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
MCF2L-208ENST00000397030 LRP2P98164 4655 aa5.12□□□□□ -1.59
MCF2L-208ENST00000397030 KIAA1109Q2LD37 5005 aa5.11□□□□□ -1.59
MCF2L-208ENST00000397030 KRTAP19-2Q3LHN2 52 aa5.08□□□□□ -1.6
MCF2L-208ENST00000397030 LCE1CQ5T751 118 aa5.08□□□□□ -1.6
MCF2L-208ENST00000397030 LCE1EQ5T753 118 aa5.08□□□□□ -1.6
MCF2L-208ENST00000397030 LCE1FQ5T754 118 aa5.08□□□□□ -1.6
MCF2L-208ENST00000397030 LCE1AQ5T7P2 110 aa5.08□□□□□ -1.6
MCF2L-208ENST00000397030 FLGP20930 4061 aaPredicted RBP5.07□□□□□ -1.6
MCF2L-208ENST00000397030 SYNE2Q8WXH0 6885 aaKnown RBP5□□□□□ -1.61
MCF2L-208ENST00000397030 KRTAP2-3P0C7H8 128 aa5□□□□□ -1.61
MCF2L-208ENST00000397030 KRTAP2-4Q9BYR9 128 aa5□□□□□ -1.61
MCF2L-208ENST00000397030 KMT2CQ8NEZ4 4911 aaKnown RBP4.95□□□□□ -1.62
MCF2L-208ENST00000397030 MT1AP04731 61 aa4.95□□□□□ -1.62
MCF2L-208ENST00000397030 KRTAP6-3Q3LI67 103 aa4.87□□□□□ -1.63
MCF2L-208ENST00000397030 KRTAP2-1Q9BYU5 128 aa4.87□□□□□ -1.63
MCF2L-208ENST00000397030 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.87□□□□□ -1.63
MCF2L-208ENST00000397030 LCE2AQ5TA79 106 aaPredicted RBP4.85□□□□□ -1.63
MCF2L-208ENST00000397030 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
MCF2L-208ENST00000397030 EPPK1P58107 5090 aaKnown RBP4.83□□□□□ -1.64
MCF2L-208ENST00000397030 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
MCF2L-208ENST00000397030 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
MCF2L-208ENST00000397030 LCE4AQ5TA78 99 aa4.75□□□□□ -1.65
MCF2L-208ENST00000397030 FSIP2Q5CZC0 6907 aa4.74□□□□□ -1.65
MCF2L-208ENST00000397030 KRTAP6-1Q3LI64 71 aa4.73□□□□□ -1.65
MCF2L-208ENST00000397030 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
MCF2L-208ENST00000397030 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
MCF2L-208ENST00000397030 ABCA13Q86UQ4 5058 aa4.51□□□□□ -1.69
MCF2L-208ENST00000397030 FAT4Q6V0I7 4981 aa4.51□□□□□ -1.69
MCF2L-208ENST00000397030 HMCN2Q8NDA2 5059 aa4.49□□□□□ -1.69
MCF2L-208ENST00000397030 MUC2Q02817 5179 aa4.47□□□□□ -1.69
MCF2L-208ENST00000397030 RNF213Q63HN8 5207 aa4.41□□□□□ -1.7
MCF2L-208ENST00000397030 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
MCF2L-208ENST00000397030 UBR4Q5T4S7 5183 aa4.24□□□□□ -1.73
MCF2L-208ENST00000397030 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
MCF2L-208ENST00000397030 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.75
MCF2L-208ENST00000397030 KRTAP20-2Q3LI61 65 aa4.12□□□□□ -1.75
MCF2L-208ENST00000397030 KRTAP4-6Q9BYQ5 205 aa4.06□□□□□ -1.76
MCF2L-208ENST00000397030 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
MCF2L-208ENST00000397030 KRTAP4-12Q9BQ66 201 aa4□□□□□ -1.77
MCF2L-208ENST00000397030 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
MCF2L-208ENST00000397030 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
MCF2L-208ENST00000397030 NEBP20929 6669 aa3.96□□□□□ -1.78
MCF2L-208ENST00000397030 KMT2DO14686 5537 aa3.95□□□□□ -1.78
MCF2L-208ENST00000397030 MACF1Q9UPN3 7388 aaKnown RBP3.75□□□□□ -1.81
MCF2L-208ENST00000397030 KRTAP5-9P26371 169 aa3.72□□□□□ -1.81
MCF2L-208ENST00000397030 USH2AO75445 5202 aa3.67□□□□□ -1.82
MCF2L-208ENST00000397030 DSTQ03001 7570 aaKnown RBP3.66□□□□□ -1.82
MCF2L-208ENST00000397030 FCGBPQ9Y6R7 5405 aaPredicted RBP3.62□□□□□ -1.83
MCF2L-208ENST00000397030 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
MCF2L-208ENST00000397030 SSPOA2VEC9 5147 aa3.51□□□□□ -1.85
MCF2L-208ENST00000397030 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
MCF2L-208ENST00000397030 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
MCF2L-208ENST00000397030 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
MCF2L-208ENST00000397030 MUC12Q9UKN1 5478 aa3.13□□□□□ -1.91
MCF2L-208ENST00000397030 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
MCF2L-208ENST00000397030 PHGR1C9JFL3 82 aa3.09□□□□□ -1.92
MCF2L-208ENST00000397030 MDN1Q9NU22 5596 aa3.07□□□□□ -1.92
MCF2L-208ENST00000397030 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
MCF2L-208ENST00000397030 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
MCF2L-208ENST00000397030 HMCN1Q96RW7 5635 aa2.59□□□□□ -1.99
MCF2L-208ENST00000397030 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
MCF2L-208ENST00000397030 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
MCF2L-208ENST00000397030 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
MCF2L-208ENST00000397030 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
MCF2L-208ENST00000397030 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
MCF2L-208ENST00000397030 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
MCF2L-208ENST00000397030 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
MCF2L-208ENST00000397030 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
MCF2L-208ENST00000397030 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
MCF2L-208ENST00000397030 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
MCF2L-208ENST00000397030 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
MCF2L-208ENST00000397030 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 19.9 ms