RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 KRTAP9-4Q9BYQ2 154 aa6.17□□□□□ -1.42
CLTA-203ENST00000396603 K7ERS5 55 aa6.15□□□□□ -1.42
CLTA-203ENST00000396603 KRTAP19-7Q3SYF9 63 aa6.13□□□□□ -1.43
CLTA-203ENST00000396603 KRTAP19-3Q7Z4W3 81 aa6.12□□□□□ -1.43
CLTA-203ENST00000396603 MT1EP04732 61 aa6.1□□□□□ -1.43
CLTA-203ENST00000396603 A6NED7 52 aa6.09□□□□□ -1.43
CLTA-203ENST00000396603 LCE4AQ5TA78 99 aa6.07□□□□□ -1.44
CLTA-203ENST00000396603 TNP1P09430 55 aa6.04□□□□□ -1.44
CLTA-203ENST00000396603 KRTAP23-1A1A580 65 aa6.03□□□□□ -1.44
CLTA-203ENST00000396603 KRTAP4-9Q9BYQ8 210 aa6.02□□□□□ -1.45
CLTA-203ENST00000396603 C10orf95Q9H7T3 257 aa6.01□□□□□ -1.45
CLTA-203ENST00000396603 LCE1DQ5T752 114 aa6□□□□□ -1.45
CLTA-203ENST00000396603 MT1GP13640 62 aa5.97□□□□□ -1.45
CLTA-203ENST00000396603 PP632Q6XCG6 107 aa5.94□□□□□ -1.46
CLTA-203ENST00000396603 HMCN1Q96RW7 5635 aa5.87□□□□□ -1.47
CLTA-203ENST00000396603 KRTAP19-5Q3LI72 72 aa5.87□□□□□ -1.47
CLTA-203ENST00000396603 CDC42SE1Q9NRR8 79 aa5.87□□□□□ -1.47
CLTA-203ENST00000396603 KRTAP25-1Q3LHN0 102 aa5.86□□□□□ -1.47
CLTA-203ENST00000396603 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
CLTA-203ENST00000396603 LCE3AQ5TA76 89 aa5.81□□□□□ -1.48
CLTA-203ENST00000396603 MT1MQ8N339 61 aa5.81□□□□□ -1.48
CLTA-203ENST00000396603 MT1LQ93083 61 aa5.78□□□□□ -1.48
CLTA-203ENST00000396603 MT4P47944 62 aa5.77□□□□□ -1.49
CLTA-203ENST00000396603 KRTAP5-4Q6L8H1 288 aa5.75□□□□□ -1.49
CLTA-203ENST00000396603 AHNAK2Q8IVF2 5795 aa5.73□□□□□ -1.49
CLTA-203ENST00000396603 ROMO1P60602 79 aa5.7□□□□□ -1.5
CLTA-203ENST00000396603 KRTAP5-10Q6L8G5 202 aa5.66□□□□□ -1.5
CLTA-203ENST00000396603 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
CLTA-203ENST00000396603 KRTAP4-11Q9BYQ6 195 aa5.6□□□□□ -1.51
CLTA-203ENST00000396603 KRTAP4-3Q9BYR4 195 aa5.59□□□□□ -1.51
CLTA-203ENST00000396603 BRK1Q8WUW1 75 aa5.56□□□□□ -1.52
CLTA-203ENST00000396603 KRTAP4-2Q9BYR5 136 aa5.52□□□□□ -1.53
CLTA-203ENST00000396603 KRTAP5-7Q6L8G8 165 aa5.5□□□□□ -1.53
CLTA-203ENST00000396603 KRTAP15-1Q3LI76 137 aa5.49□□□□□ -1.53
CLTA-203ENST00000396603 KRTAP5-3Q6L8H2 238 aa5.47□□□□□ -1.53
CLTA-203ENST00000396603 SPRR5A0A1B0GTR4 108 aa5.41□□□□□ -1.54
CLTA-203ENST00000396603 KRTAP20-2Q3LI61 65 aa5.41□□□□□ -1.54
CLTA-203ENST00000396603 KRTAP5-5Q701N2 237 aaPredicted RBP5.39□□□□□ -1.55
CLTA-203ENST00000396603 SVIPQ8NHG7 77 aa5.39□□□□□ -1.55
CLTA-203ENST00000396603 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
CLTA-203ENST00000396603 SYNE1Q8NF91 8797 aaKnown RBP5.26□□□□□ -1.57
CLTA-203ENST00000396603 PMAIP1Q13794 54 aa5.26□□□□□ -1.57
CLTA-203ENST00000396603 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.58
CLTA-203ENST00000396603 PRO0628Q9UI54 55 aa5.13□□□□□ -1.59
CLTA-203ENST00000396603 KRTAP5-2Q701N4 177 aa4.99□□□□□ -1.61
CLTA-203ENST00000396603 MT1AP04731 61 aa4.93□□□□□ -1.62
CLTA-203ENST00000396603 PRAC1Q96KF2 57 aa4.9□□□□□ -1.63
CLTA-203ENST00000396603 KRTAP6-1Q3LI64 71 aa4.86□□□□□ -1.63
CLTA-203ENST00000396603 KRTAP5-8O75690 187 aa4.84□□□□□ -1.63
CLTA-203ENST00000396603 KTN1-AS1Q86SY8 53 aa4.84□□□□□ -1.63
CLTA-203ENST00000396603 A0A0A0MQY5 61 aa4.81□□□□□ -1.64
CLTA-203ENST00000396603 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
CLTA-203ENST00000396603 AHNAKQ09666 5890 aaKnown RBP4.8□□□□□ -1.64
CLTA-203ENST00000396603 MUC5ACP98088 5654 aa4.79□□□□□ -1.64
CLTA-203ENST00000396603 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
CLTA-203ENST00000396603 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
CLTA-203ENST00000396603 KRTAP6-2Q3LI66 62 aa4.7□□□□□ -1.66
CLTA-203ENST00000396603 MT3P25713 68 aa4.54□□□□□ -1.68
CLTA-203ENST00000396603 KRTAP5-1Q6L8H4 278 aa4.5□□□□□ -1.69
CLTA-203ENST00000396603 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
CLTA-203ENST00000396603 LUZP6Q538Z0 58 aa4.26□□□□□ -1.73
CLTA-203ENST00000396603 NDUFAF8A1L188 74 aa3.98□□□□□ -1.77
CLTA-203ENST00000396603 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
CLTA-203ENST00000396603 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
CLTA-203ENST00000396603 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.79
CLTA-203ENST00000396603 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
CLTA-203ENST00000396603 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
CLTA-203ENST00000396603 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
CLTA-203ENST00000396603 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
CLTA-203ENST00000396603 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
CLTA-203ENST00000396603 KRTAP21-2Q3LI59 83 aa3.24□□□□□ -1.89
CLTA-203ENST00000396603 INE1O15225 51 aa3.03□□□□□ -1.92
CLTA-203ENST00000396603 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
CLTA-203ENST00000396603 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
CLTA-203ENST00000396603 PRM1P04553 51 aa2.89□□□□□ -1.95
CLTA-203ENST00000396603 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
CLTA-203ENST00000396603 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 8.1 ms