RNA–Protein interactions for RNA: ENST00000396535.7

SHC4-202, Transcript of SHC adaptor protein 4, humanhuman

TSL 1 (best) BASIC

Gene SHC4, Length 2,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-202ENST00000396535 KRTAP19-8Q3LI54 63 aa2.6□□□□□ -1.99
SHC4-202ENST00000396535 KRTAP10-7P60409 375 aaPredicted RBP2.6□□□□□ -1.99
SHC4-202ENST00000396535 MT1FP04733 61 aa2.59□□□□□ -1.99
SHC4-202ENST00000396535 KRTAP4-9Q9BYQ8 210 aa2.59□□□□□ -1.99
SHC4-202ENST00000396535 MT1BP07438 61 aa2.58□□□□□ -2
SHC4-202ENST00000396535 KRTAP2-3P0C7H8 128 aa2.58□□□□□ -2
SHC4-202ENST00000396535 KRTAP2-4Q9BYR9 128 aa2.58□□□□□ -2
SHC4-202ENST00000396535 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
SHC4-202ENST00000396535 KRTAP9-6A8MVA2 160 aa2.57□□□□□ -2
SHC4-202ENST00000396535 MT2AP02795 61 aa2.57□□□□□ -2
SHC4-202ENST00000396535 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
SHC4-202ENST00000396535 KRTAP4-7Q9BYR0 210 aa2.54□□□□□ -2
SHC4-202ENST00000396535 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
SHC4-202ENST00000396535 M0R2T5 61 aa2.53□□□□□ -2
SHC4-202ENST00000396535 KRTAP19-5Q3LI72 72 aa2.53□□□□□ -2
SHC4-202ENST00000396535 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
SHC4-202ENST00000396535 MT3P25713 68 aa2.47□□□□□ -2.01
SHC4-202ENST00000396535 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
SHC4-202ENST00000396535 KMT2DO14686 5537 aa2.45□□□□□ -2.02
SHC4-202ENST00000396535 FSIP2Q5CZC0 6907 aa2.42□□□□□ -2.02
SHC4-202ENST00000396535 KRTAP19-7Q3SYF9 63 aa2.35□□□□□ -2.03
SHC4-202ENST00000396535 USH2AO75445 5202 aa2.34□□□□□ -2.04
SHC4-202ENST00000396535 KRTAP12-4P60329 112 aa2.34□□□□□ -2.04
SHC4-202ENST00000396535 SSPOA2VEC9 5147 aa2.31□□□□□ -2.04
SHC4-202ENST00000396535 MT1LQ93083 61 aa2.3□□□□□ -2.04
SHC4-202ENST00000396535 KRTAP19-6Q3LI70 58 aa2.25□□□□□ -2.05
SHC4-202ENST00000396535 MT1EP04732 61 aa2.25□□□□□ -2.05
SHC4-202ENST00000396535 CRCT1Q9UGL9 99 aa2.21□□□□□ -2.05
SHC4-202ENST00000396535 KRTAP6-3Q3LI67 103 aa2.19□□□□□ -2.06
SHC4-202ENST00000396535 FCGBPQ9Y6R7 5405 aaPredicted RBP2.19□□□□□ -2.06
SHC4-202ENST00000396535 MT1GP13640 62 aa2.18□□□□□ -2.06
SHC4-202ENST00000396535 KRTAP4-3Q9BYR4 195 aa2.18□□□□□ -2.06
SHC4-202ENST00000396535 PRM1P04553 51 aa2.12□□□□□ -2.07
SHC4-202ENST00000396535 MACF1Q9UPN3 7388 aaKnown RBP2.11□□□□□ -2.07
SHC4-202ENST00000396535 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
SHC4-202ENST00000396535 SYNE2Q8WXH0 6885 aaKnown RBP2.1□□□□□ -2.07
SHC4-202ENST00000396535 SYNE1Q8NF91 8797 aaKnown RBP2.08□□□□□ -2.08
SHC4-202ENST00000396535 MT1AP04731 61 aa2.08□□□□□ -2.08
SHC4-202ENST00000396535 MT1MQ8N339 61 aa2.08□□□□□ -2.08
SHC4-202ENST00000396535 MUC12Q9UKN1 5478 aa2.04□□□□□ -2.08
SHC4-202ENST00000396535 KRTAP19-3Q7Z4W3 81 aa2.02□□□□□ -2.09
SHC4-202ENST00000396535 KRTAP5-9P26371 169 aa2.01□□□□□ -2.09
SHC4-202ENST00000396535 DSTQ03001 7570 aaKnown RBP2□□□□□ -2.09
SHC4-202ENST00000396535 MDN1Q9NU22 5596 aa1.97□□□□□ -2.09
SHC4-202ENST00000396535 KRTAP6-1Q3LI64 71 aa1.96□□□□□ -2.1
SHC4-202ENST00000396535 KRTAP6-2Q3LI66 62 aa1.96□□□□□ -2.1
SHC4-202ENST00000396535 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
SHC4-202ENST00000396535 SPRR2FQ96RM1 72 aa1.95□□□□□ -2.1
SHC4-202ENST00000396535 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
SHC4-202ENST00000396535 SPRR2EP22531 72 aa1.88□□□□□ -2.11
SHC4-202ENST00000396535 SPRR2BP35325 72 aa1.88□□□□□ -2.11
SHC4-202ENST00000396535 SPRR2AP35326 72 aa1.88□□□□□ -2.11
SHC4-202ENST00000396535 OBSCNQ5VST9 7968 aa1.88□□□□□ -2.11
SHC4-202ENST00000396535 NEBP20929 6669 aa1.86□□□□□ -2.11
SHC4-202ENST00000396535 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
SHC4-202ENST00000396535 SPRR2DP22532 72 aa1.81□□□□□ -2.12
SHC4-202ENST00000396535 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.78□□□□□ -2.12
SHC4-202ENST00000396535 KRTAP20-1Q3LI63 56 aa1.74□□□□□ -2.13
SHC4-202ENST00000396535 GPR98Q8WXG9 6306 aa1.69□□□□□ -2.14
SHC4-202ENST00000396535 KRTAP5-1Q6L8H4 278 aa1.68□□□□□ -2.14
SHC4-202ENST00000396535 KRTAP5-4Q6L8H1 288 aa1.67□□□□□ -2.14
SHC4-202ENST00000396535 MT4P47944 62 aa1.57□□□□□ -2.16
SHC4-202ENST00000396535 KRTAP5-8O75690 187 aa1.54□□□□□ -2.16
SHC4-202ENST00000396535 KRTAP20-2Q3LI61 65 aa1.54□□□□□ -2.16
SHC4-202ENST00000396535 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
SHC4-202ENST00000396535 LCE1CQ5T751 118 aa1.51□□□□□ -2.17
SHC4-202ENST00000396535 LCE1BQ5T7P3 118 aa1.51□□□□□ -2.17
SHC4-202ENST00000396535 KRTAP5-2Q701N4 177 aa1.51□□□□□ -2.17
SHC4-202ENST00000396535 KRTAP5-10Q6L8G5 202 aa1.48□□□□□ -2.17
SHC4-202ENST00000396535 KRTAP4-4Q9BYR3 166 aa1.45□□□□□ -2.18
SHC4-202ENST00000396535 AHNAK2Q8IVF2 5795 aa1.42□□□□□ -2.18
SHC4-202ENST00000396535 AHNAKQ09666 5890 aaKnown RBP1.39□□□□□ -2.19
SHC4-202ENST00000396535 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
SHC4-202ENST00000396535 KRTAP5-7Q6L8G8 165 aa1.33□□□□□ -2.2
SHC4-202ENST00000396535 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
SHC4-202ENST00000396535 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
SHC4-202ENST00000396535 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 58.6 ms