RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 SPRR2FQ96RM1 72 aa5.46□□□□□ -1.54
SNX6-202ENST00000396526 KRTAP9-6A8MVA2 160 aa5.44□□□□□ -1.54
SNX6-202ENST00000396526 CRCT1Q9UGL9 99 aa5.41□□□□□ -1.54
SNX6-202ENST00000396526 MT1MQ8N339 61 aa5.38□□□□□ -1.55
SNX6-202ENST00000396526 INE1O15225 51 aa5.32□□□□□ -1.56
SNX6-202ENST00000396526 LCE5AQ5TCM9 118 aa5.29□□□□□ -1.56
SNX6-202ENST00000396526 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
SNX6-202ENST00000396526 MUC12Q9UKN1 5478 aa5.26□□□□□ -1.57
SNX6-202ENST00000396526 MACF1Q9UPN3 7388 aaKnown RBP5.23□□□□□ -1.57
SNX6-202ENST00000396526 KRTAP2-3P0C7H8 128 aa5.22□□□□□ -1.57
SNX6-202ENST00000396526 KRTAP2-4Q9BYR9 128 aa5.22□□□□□ -1.57
SNX6-202ENST00000396526 KRTAP2-1Q9BYU5 128 aa5.22□□□□□ -1.57
SNX6-202ENST00000396526 LOC100996750A0A140TA64 210 aa5.16□□□□□ -1.58
SNX6-202ENST00000396526 KRTAP5-9P26371 169 aa5.16□□□□□ -1.58
SNX6-202ENST00000396526 LCE1AQ5T7P2 110 aa5.08□□□□□ -1.6
SNX6-202ENST00000396526 SPRR2EP22531 72 aa5.08□□□□□ -1.6
SNX6-202ENST00000396526 SPRR2BP35325 72 aa5.08□□□□□ -1.6
SNX6-202ENST00000396526 SPRR2AP35326 72 aa5.08□□□□□ -1.6
SNX6-202ENST00000396526 SYNE2Q8WXH0 6885 aaKnown RBP5.01□□□□□ -1.61
SNX6-202ENST00000396526 KRTAP6-3Q3LI67 103 aa4.97□□□□□ -1.61
SNX6-202ENST00000396526 DSTQ03001 7570 aaKnown RBP4.96□□□□□ -1.62
SNX6-202ENST00000396526 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.94□□□□□ -1.62
SNX6-202ENST00000396526 KRTAP9-6A0A140TA67 174 aa4.94□□□□□ -1.62
SNX6-202ENST00000396526 MDN1Q9NU22 5596 aa4.89□□□□□ -1.63
SNX6-202ENST00000396526 SPRR2DP22532 72 aa4.88□□□□□ -1.63
SNX6-202ENST00000396526 MT1AP04731 61 aa4.84□□□□□ -1.64
SNX6-202ENST00000396526 LCE3BQ5TA77 95 aa4.78□□□□□ -1.65
SNX6-202ENST00000396526 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
SNX6-202ENST00000396526 KRTAP5-5Q701N2 237 aaPredicted RBP4.73□□□□□ -1.65
SNX6-202ENST00000396526 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
SNX6-202ENST00000396526 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
SNX6-202ENST00000396526 KRTAP9-7A8MTY7 169 aa4.59□□□□□ -1.67
SNX6-202ENST00000396526 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
SNX6-202ENST00000396526 LCE3DQ9BYE3 92 aa4.51□□□□□ -1.69
SNX6-202ENST00000396526 KRTAP4-9Q9BYQ8 210 aa4.5□□□□□ -1.69
SNX6-202ENST00000396526 NEBP20929 6669 aa4.45□□□□□ -1.7
SNX6-202ENST00000396526 MT3P25713 68 aa4.43□□□□□ -1.7
SNX6-202ENST00000396526 LCE3EQ5T5B0 92 aa4.42□□□□□ -1.7
SNX6-202ENST00000396526 KRTAP5-4Q6L8H1 288 aa4.37□□□□□ -1.71
SNX6-202ENST00000396526 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
SNX6-202ENST00000396526 LCE4AQ5TA78 99 aa4.32□□□□□ -1.72
SNX6-202ENST00000396526 KRTAP2-2Q9BYT5 123 aa4.25□□□□□ -1.73
SNX6-202ENST00000396526 MT4P47944 62 aa4.23□□□□□ -1.73
SNX6-202ENST00000396526 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
SNX6-202ENST00000396526 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
SNX6-202ENST00000396526 KRTAP20-1Q3LI63 56 aa4.13□□□□□ -1.75
SNX6-202ENST00000396526 KRTAP20-2Q3LI61 65 aa4.12□□□□□ -1.75
SNX6-202ENST00000396526 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
SNX6-202ENST00000396526 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
SNX6-202ENST00000396526 PRM1P04553 51 aa3.99□□□□□ -1.77
SNX6-202ENST00000396526 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
SNX6-202ENST00000396526 KRTAP5-3Q6L8H2 238 aa3.9□□□□□ -1.78
SNX6-202ENST00000396526 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
SNX6-202ENST00000396526 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
SNX6-202ENST00000396526 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
SNX6-202ENST00000396526 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
SNX6-202ENST00000396526 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
SNX6-202ENST00000396526 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
SNX6-202ENST00000396526 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
SNX6-202ENST00000396526 KRTAP4-2Q9BYR5 136 aa3.39□□□□□ -1.87
SNX6-202ENST00000396526 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
SNX6-202ENST00000396526 AHNAK2Q8IVF2 5795 aa3.29□□□□□ -1.88
SNX6-202ENST00000396526 KRTAP5-7Q6L8G8 165 aa3.26□□□□□ -1.89
SNX6-202ENST00000396526 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
SNX6-202ENST00000396526 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
SNX6-202ENST00000396526 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
SNX6-202ENST00000396526 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
SNX6-202ENST00000396526 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
SNX6-202ENST00000396526 MUC5BQ9HC84 5762 aaPredicted RBP2.79□□□□□ -1.96
SNX6-202ENST00000396526 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.96
SNX6-202ENST00000396526 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
SNX6-202ENST00000396526 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
SNX6-202ENST00000396526 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
SNX6-202ENST00000396526 PHGR1C9JFL3 82 aa2.56□□□□□ -2
SNX6-202ENST00000396526 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
SNX6-202ENST00000396526 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
SNX6-202ENST00000396526 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 72 ms