RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 HERC2O95714 4834 aa1.48□□□□□ -2.17
GABPB1-204ENST00000396464 MT1HL1P0DM35 61 aa1.48□□□□□ -2.17
GABPB1-204ENST00000396464 KRTAP4-1Q9BYQ7 146 aa1.48□□□□□ -2.17
GABPB1-204ENST00000396464 FAT3Q8TDW7 4589 aa1.47□□□□□ -2.17
GABPB1-204ENST00000396464 LRP1Q07954 4544 aaKnown RBP1.46□□□□□ -2.18
GABPB1-204ENST00000396464 MMP24-AS1A0A0U1RRL7 71 aa1.45□□□□□ -2.18
GABPB1-204ENST00000396464 ABCA13Q86UQ4 5058 aa1.45□□□□□ -2.18
GABPB1-204ENST00000396464 DMBT1Q9UGM3 2413 aaPredicted RBP1.43□□□□□ -2.18
GABPB1-204ENST00000396464 TNXBP22105 4242 aa1.41□□□□□ -2.18
GABPB1-204ENST00000396464 PCLOQ9Y6V0 5065 aa1.4□□□□□ -2.19
GABPB1-204ENST00000396464 LPAP08519 4548 aa1.4□□□□□ -2.19
GABPB1-204ENST00000396464 HERC1Q15751 4861 aa1.39□□□□□ -2.19
GABPB1-204ENST00000396464 M0R2T5 61 aa1.39□□□□□ -2.19
GABPB1-204ENST00000396464 S4R3F8 94 aa1.36□□□□□ -2.19
GABPB1-204ENST00000396464 LRP2P98164 4655 aa1.36□□□□□ -2.19
GABPB1-204ENST00000396464 UBR4Q5T4S7 5183 aa1.34□□□□□ -2.19
GABPB1-204ENST00000396464 HMCN2Q8NDA2 5059 aa1.34□□□□□ -2.19
GABPB1-204ENST00000396464 MUC17Q685J3 4493 aa1.31□□□□□ -2.2
GABPB1-204ENST00000396464 MT1HP80294 61 aa1.27□□□□□ -2.21
GABPB1-204ENST00000396464 GPR98Q8WXG9 6306 aa1.27□□□□□ -2.21
GABPB1-204ENST00000396464 M0QZ58 72 aa1.25□□□□□ -2.21
GABPB1-204ENST00000396464 FCGBPQ9Y6R7 5405 aaPredicted RBP1.25□□□□□ -2.21
GABPB1-204ENST00000396464 MUC2Q02817 5179 aa1.24□□□□□ -2.21
GABPB1-204ENST00000396464 RNF213Q63HN8 5207 aa1.23□□□□□ -2.21
GABPB1-204ENST00000396464 KRTAP19-2Q3LHN2 52 aa1.23□□□□□ -2.21
GABPB1-204ENST00000396464 FAT4Q6V0I7 4981 aa1.22□□□□□ -2.21
GABPB1-204ENST00000396464 KRTAP2-3P0C7H8 128 aa1.22□□□□□ -2.21
GABPB1-204ENST00000396464 KRTAP19-3Q7Z4W3 81 aa1.22□□□□□ -2.21
GABPB1-204ENST00000396464 KRTAP2-4Q9BYR9 128 aa1.22□□□□□ -2.21
GABPB1-204ENST00000396464 KRTAP2-1Q9BYU5 128 aa1.22□□□□□ -2.21
GABPB1-204ENST00000396464 MT2AP02795 61 aa1.2□□□□□ -2.22
GABPB1-204ENST00000396464 FLGP20930 4061 aaPredicted RBP1.2□□□□□ -2.22
GABPB1-204ENST00000396464 MT1FP04733 61 aa1.19□□□□□ -2.22
GABPB1-204ENST00000396464 SPRR2GQ9BYE4 73 aa1.15□□□□□ -2.23
GABPB1-204ENST00000396464 FSIP2Q5CZC0 6907 aa1.11□□□□□ -2.23
GABPB1-204ENST00000396464 KRTAP19-8Q3LI54 63 aa1.11□□□□□ -2.23
GABPB1-204ENST00000396464 MT1BP07438 61 aa1.1□□□□□ -2.23
GABPB1-204ENST00000396464 TNP1P09430 55 aa1.1□□□□□ -2.23
GABPB1-204ENST00000396464 MUC5BQ9HC84 5762 aaPredicted RBP1.08□□□□□ -2.24
GABPB1-204ENST00000396464 KRTAP19-6Q3LI70 58 aa1.07□□□□□ -2.24
GABPB1-204ENST00000396464 SSPOA2VEC9 5147 aa1.07□□□□□ -2.24
GABPB1-204ENST00000396464 MT1XP80297 61 aa1.06□□□□□ -2.24
GABPB1-204ENST00000396464 KRTAP8-1Q8IUC2 63 aa1.05□□□□□ -2.24
GABPB1-204ENST00000396464 PRM1P04553 51 aa1.04□□□□□ -2.24
GABPB1-204ENST00000396464 NEBP20929 6669 aa1.04□□□□□ -2.24
GABPB1-204ENST00000396464 USH2AO75445 5202 aa1.03□□□□□ -2.25
GABPB1-204ENST00000396464 SYNE2Q8WXH0 6885 aaKnown RBP1.03□□□□□ -2.25
GABPB1-204ENST00000396464 SPRR2FQ96RM1 72 aa1.02□□□□□ -2.25
GABPB1-204ENST00000396464 SPRR2EP22531 72 aa0.98□□□□□ -2.25
GABPB1-204ENST00000396464 SPRR2BP35325 72 aa0.98□□□□□ -2.25
GABPB1-204ENST00000396464 SPRR2AP35326 72 aa0.98□□□□□ -2.25
GABPB1-204ENST00000396464 KRTAP19-5Q3LI72 72 aa0.98□□□□□ -2.25
GABPB1-204ENST00000396464 SPRR2DP22532 72 aa0.96□□□□□ -2.26
GABPB1-204ENST00000396464 AHNAKQ09666 5890 aaKnown RBP0.95□□□□□ -2.26
GABPB1-204ENST00000396464 MACF1Q9UPN3 7388 aaKnown RBP0.95□□□□□ -2.26
GABPB1-204ENST00000396464 MT1EP04732 61 aa0.94□□□□□ -2.26
GABPB1-204ENST00000396464 KMT2DO14686 5537 aa0.94□□□□□ -2.26
GABPB1-204ENST00000396464 KRTAP19-7Q3SYF9 63 aa0.93□□□□□ -2.26
GABPB1-204ENST00000396464 MT1GP13640 62 aa0.91□□□□□ -2.26
GABPB1-204ENST00000396464 KRTAP20-1Q3LI63 56 aa0.91□□□□□ -2.26
GABPB1-204ENST00000396464 MT1LQ93083 61 aa0.91□□□□□ -2.26
GABPB1-204ENST00000396464 MT1MQ8N339 61 aa0.89□□□□□ -2.27
GABPB1-204ENST00000396464 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
GABPB1-204ENST00000396464 MUC12Q9UKN1 5478 aa0.88□□□□□ -2.27
GABPB1-204ENST00000396464 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
GABPB1-204ENST00000396464 MDN1Q9NU22 5596 aa0.85□□□□□ -2.27
GABPB1-204ENST00000396464 AHNAK2Q8IVF2 5795 aa0.84□□□□□ -2.28
GABPB1-204ENST00000396464 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
GABPB1-204ENST00000396464 MT4P47944 62 aa0.83□□□□□ -2.28
GABPB1-204ENST00000396464 DSTQ03001 7570 aaKnown RBP0.83□□□□□ -2.28
GABPB1-204ENST00000396464 SYNE1Q8NF91 8797 aaKnown RBP0.8□□□□□ -2.28
GABPB1-204ENST00000396464 MT1AP04731 61 aa0.79□□□□□ -2.28
GABPB1-204ENST00000396464 KRTAP6-1Q3LI64 71 aa0.78□□□□□ -2.28
GABPB1-204ENST00000396464 KRTAP20-2Q3LI61 65 aa0.74□□□□□ -2.29
GABPB1-204ENST00000396464 KRTAP6-2Q3LI66 62 aa0.73□□□□□ -2.29
GABPB1-204ENST00000396464 MUC5ACP98088 5654 aa0.68□□□□□ -2.3
GABPB1-204ENST00000396464 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 85.2 ms