RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 FSIP2Q5CZC0 6907 aa4.57□□□□□ -1.68
GTF2A2-202ENST00000396060 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
GTF2A2-202ENST00000396060 KRTAP12-3P60328 96 aa4.48□□□□□ -1.69
GTF2A2-202ENST00000396060 CRCT1Q9UGL9 99 aa4.48□□□□□ -1.69
GTF2A2-202ENST00000396060 KMT2DO14686 5537 aa4.44□□□□□ -1.7
GTF2A2-202ENST00000396060 KRTAP19-5Q3LI72 72 aa4.44□□□□□ -1.7
GTF2A2-202ENST00000396060 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
GTF2A2-202ENST00000396060 KRTAP19-7Q3SYF9 63 aa4.4□□□□□ -1.7
GTF2A2-202ENST00000396060 MT1EP04732 61 aa4.31□□□□□ -1.72
GTF2A2-202ENST00000396060 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
GTF2A2-202ENST00000396060 MACF1Q9UPN3 7388 aaKnown RBP4.24□□□□□ -1.73
GTF2A2-202ENST00000396060 MT1LQ93083 61 aa4.23□□□□□ -1.73
GTF2A2-202ENST00000396060 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
GTF2A2-202ENST00000396060 KRTAP5-9P26371 169 aa4.2□□□□□ -1.74
GTF2A2-202ENST00000396060 SPRR2FQ96RM1 72 aa4.16□□□□□ -1.74
GTF2A2-202ENST00000396060 KRTAP19-3Q7Z4W3 81 aa4.14□□□□□ -1.75
GTF2A2-202ENST00000396060 MT1GP13640 62 aa4.14□□□□□ -1.75
GTF2A2-202ENST00000396060 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
GTF2A2-202ENST00000396060 MUC12Q9UKN1 5478 aa4.12□□□□□ -1.75
GTF2A2-202ENST00000396060 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
GTF2A2-202ENST00000396060 LUZP6Q538Z0 58 aa4.07□□□□□ -1.76
GTF2A2-202ENST00000396060 MT1MQ8N339 61 aa4.06□□□□□ -1.76
GTF2A2-202ENST00000396060 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
GTF2A2-202ENST00000396060 LCE1AQ5T7P2 110 aa4.02□□□□□ -1.77
GTF2A2-202ENST00000396060 MDN1Q9NU22 5596 aa3.97□□□□□ -1.77
GTF2A2-202ENST00000396060 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
GTF2A2-202ENST00000396060 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
GTF2A2-202ENST00000396060 SPRR2EP22531 72 aa3.94□□□□□ -1.78
GTF2A2-202ENST00000396060 SPRR2BP35325 72 aa3.94□□□□□ -1.78
GTF2A2-202ENST00000396060 SPRR2AP35326 72 aa3.94□□□□□ -1.78
GTF2A2-202ENST00000396060 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
GTF2A2-202ENST00000396060 NEBP20929 6669 aa3.84□□□□□ -1.79
GTF2A2-202ENST00000396060 SPRR2DP22532 72 aa3.8□□□□□ -1.8
GTF2A2-202ENST00000396060 KRTAP2-3P0C7H8 128 aa3.72□□□□□ -1.81
GTF2A2-202ENST00000396060 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
GTF2A2-202ENST00000396060 KRTAP2-4Q9BYR9 128 aa3.72□□□□□ -1.81
GTF2A2-202ENST00000396060 KRTAP2-1Q9BYU5 128 aa3.72□□□□□ -1.81
GTF2A2-202ENST00000396060 DSTQ03001 7570 aaKnown RBP3.71□□□□□ -1.82
GTF2A2-202ENST00000396060 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
GTF2A2-202ENST00000396060 MT1AP04731 61 aa3.62□□□□□ -1.83
GTF2A2-202ENST00000396060 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
GTF2A2-202ENST00000396060 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
GTF2A2-202ENST00000396060 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
GTF2A2-202ENST00000396060 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
GTF2A2-202ENST00000396060 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.86
GTF2A2-202ENST00000396060 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
GTF2A2-202ENST00000396060 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
GTF2A2-202ENST00000396060 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
GTF2A2-202ENST00000396060 INE1O15225 51 aa3.35□□□□□ -1.87
GTF2A2-202ENST00000396060 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
GTF2A2-202ENST00000396060 MT3P25713 68 aa3.28□□□□□ -1.88
GTF2A2-202ENST00000396060 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
GTF2A2-202ENST00000396060 MT4P47944 62 aa3.26□□□□□ -1.89
GTF2A2-202ENST00000396060 KRTAP20-2Q3LI61 65 aa3.25□□□□□ -1.89
GTF2A2-202ENST00000396060 KRTAP6-2Q3LI66 62 aa3.25□□□□□ -1.89
GTF2A2-202ENST00000396060 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
GTF2A2-202ENST00000396060 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.9
GTF2A2-202ENST00000396060 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
GTF2A2-202ENST00000396060 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
GTF2A2-202ENST00000396060 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
GTF2A2-202ENST00000396060 AHNAK2Q8IVF2 5795 aa2.9□□□□□ -1.95
GTF2A2-202ENST00000396060 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
GTF2A2-202ENST00000396060 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
GTF2A2-202ENST00000396060 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.98
GTF2A2-202ENST00000396060 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
GTF2A2-202ENST00000396060 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
GTF2A2-202ENST00000396060 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
GTF2A2-202ENST00000396060 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
GTF2A2-202ENST00000396060 PRM1P04553 51 aa2.66□□□□□ -1.98
GTF2A2-202ENST00000396060 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
GTF2A2-202ENST00000396060 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
GTF2A2-202ENST00000396060 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
GTF2A2-202ENST00000396060 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
GTF2A2-202ENST00000396060 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
GTF2A2-202ENST00000396060 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
GTF2A2-202ENST00000396060 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
GTF2A2-202ENST00000396060 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 67.8 ms