RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 BRK1Q8WUW1 75 aa7.5□□□□□ -1.21
PSEN1-203ENST00000394157 KMT2DO14686 5537 aa7.47□□□□□ -1.21
PSEN1-203ENST00000394157 KRTAP5-9P26371 169 aa7.47□□□□□ -1.21
PSEN1-203ENST00000394157 KRTAP25-1Q3LHN0 102 aa7.46□□□□□ -1.22
PSEN1-203ENST00000394157 MUC12Q9UKN1 5478 aa7.44□□□□□ -1.22
PSEN1-203ENST00000394157 ROMO1P60602 79 aa7.4□□□□□ -1.22
PSEN1-203ENST00000394157 SPRR2FQ96RM1 72 aa7.35□□□□□ -1.23
PSEN1-203ENST00000394157 LCE3AQ5TA76 89 aa7.29□□□□□ -1.24
PSEN1-203ENST00000394157 LCE1AQ5T7P2 110 aa7.25□□□□□ -1.25
PSEN1-203ENST00000394157 KRTAP19-7Q3SYF9 63 aa7.21□□□□□ -1.26
PSEN1-203ENST00000394157 KRTAP19-5Q3LI72 72 aa7.17□□□□□ -1.26
PSEN1-203ENST00000394157 MT1EP04732 61 aa7.13□□□□□ -1.27
PSEN1-203ENST00000394157 PMAIP1Q13794 54 aa7.11□□□□□ -1.27
PSEN1-203ENST00000394157 PP632Q6XCG6 107 aa7.11□□□□□ -1.27
PSEN1-203ENST00000394157 PRO0628Q9UI54 55 aa7.11□□□□□ -1.27
PSEN1-203ENST00000394157 SPRR2EP22531 72 aa7.1□□□□□ -1.27
PSEN1-203ENST00000394157 SPRR2BP35325 72 aa7.1□□□□□ -1.27
PSEN1-203ENST00000394157 SPRR2AP35326 72 aa7.1□□□□□ -1.27
PSEN1-203ENST00000394157 KRTAP2-3P0C7H8 128 aa7.09□□□□□ -1.27
PSEN1-203ENST00000394157 KRTAP2-4Q9BYR9 128 aa7.09□□□□□ -1.27
PSEN1-203ENST00000394157 MDN1Q9NU22 5596 aa7.09□□□□□ -1.27
PSEN1-203ENST00000394157 KRTAP12-3P60328 96 aa7.05□□□□□ -1.28
PSEN1-203ENST00000394157 KRTAP19-3Q7Z4W3 81 aa6.97□□□□□ -1.29
PSEN1-203ENST00000394157 MT1LQ93083 61 aa6.91□□□□□ -1.3
PSEN1-203ENST00000394157 MT1GP13640 62 aa6.9□□□□□ -1.3
PSEN1-203ENST00000394157 GPR98Q8WXG9 6306 aa6.88□□□□□ -1.31
PSEN1-203ENST00000394157 SPRR2DP22532 72 aa6.87□□□□□ -1.31
PSEN1-203ENST00000394157 A0A0A0MQY5 61 aa6.86□□□□□ -1.31
PSEN1-203ENST00000394157 KRTAP2-2Q9BYT5 123 aa6.81□□□□□ -1.32
PSEN1-203ENST00000394157 KRTAP2-1Q9BYU5 128 aa6.81□□□□□ -1.32
PSEN1-203ENST00000394157 MT1MQ8N339 61 aa6.74□□□□□ -1.33
PSEN1-203ENST00000394157 MT3P25713 68 aa6.68□□□□□ -1.34
PSEN1-203ENST00000394157 KTN1-AS1Q86SY8 53 aa6.65□□□□□ -1.34
PSEN1-203ENST00000394157 PRAC1Q96KF2 57 aa6.63□□□□□ -1.35
PSEN1-203ENST00000394157 LCE3CQ5T5A8 94 aa6.55□□□□□ -1.36
PSEN1-203ENST00000394157 DSTQ03001 7570 aaKnown RBP6.5□□□□□ -1.37
PSEN1-203ENST00000394157 KRTAP4-3Q9BYR4 195 aa6.5□□□□□ -1.37
PSEN1-203ENST00000394157 LCE1EQ5T753 118 aa6.21□□□□□ -1.42
PSEN1-203ENST00000394157 KRTAP5-5Q701N2 237 aaPredicted RBP6.14□□□□□ -1.43
PSEN1-203ENST00000394157 KRTAP5-11Q6L8G4 156 aa6.13□□□□□ -1.43
PSEN1-203ENST00000394157 KRTAP5-4Q6L8H1 288 aa6.13□□□□□ -1.43
PSEN1-203ENST00000394157 KRTAP9-6A8MVA2 160 aa6.11□□□□□ -1.43
PSEN1-203ENST00000394157 SPRR5A0A1B0GTR4 108 aa6.03□□□□□ -1.44
PSEN1-203ENST00000394157 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.98□□□□□ -1.45
PSEN1-203ENST00000394157 KRTAP5-10Q6L8G5 202 aa5.96□□□□□ -1.46
PSEN1-203ENST00000394157 AHNAK2Q8IVF2 5795 aa5.96□□□□□ -1.46
PSEN1-203ENST00000394157 HMCN1Q96RW7 5635 aa5.94□□□□□ -1.46
PSEN1-203ENST00000394157 MT4P47944 62 aa5.92□□□□□ -1.46
PSEN1-203ENST00000394157 MT1AP04731 61 aa5.91□□□□□ -1.46
PSEN1-203ENST00000394157 KRTAP12-4P60329 112 aa5.88□□□□□ -1.47
PSEN1-203ENST00000394157 KRTAP5-7Q6L8G8 165 aa5.85□□□□□ -1.47
PSEN1-203ENST00000394157 LCE1FQ5T754 118 aa5.83□□□□□ -1.48
PSEN1-203ENST00000394157 KRTAP6-1Q3LI64 71 aa5.8□□□□□ -1.48
PSEN1-203ENST00000394157 SYNE1Q8NF91 8797 aaKnown RBP5.79□□□□□ -1.48
PSEN1-203ENST00000394157 NDUFAF8A1L188 74 aa5.76□□□□□ -1.49
PSEN1-203ENST00000394157 KRTAP20-2Q3LI61 65 aa5.72□□□□□ -1.49
PSEN1-203ENST00000394157 LUZP6Q538Z0 58 aa5.61□□□□□ -1.51
PSEN1-203ENST00000394157 KRTAP5-2Q701N4 177 aa5.47□□□□□ -1.53
PSEN1-203ENST00000394157 KRTAP6-2Q3LI66 62 aa5.44□□□□□ -1.54
PSEN1-203ENST00000394157 KRTAP5-1Q6L8H4 278 aa5.23□□□□□ -1.57
PSEN1-203ENST00000394157 AHNAKQ09666 5890 aaKnown RBP5.21□□□□□ -1.58
PSEN1-203ENST00000394157 MUC5ACP98088 5654 aa5.1□□□□□ -1.59
PSEN1-203ENST00000394157 MUC5BQ9HC84 5762 aaPredicted RBP5.04□□□□□ -1.6
PSEN1-203ENST00000394157 LCE3EQ5T5B0 92 aa5.01□□□□□ -1.61
PSEN1-203ENST00000394157 KRTAP4-4Q9BYR3 166 aa4.96□□□□□ -1.62
PSEN1-203ENST00000394157 OBSCNQ5VST9 7968 aa4.93□□□□□ -1.62
PSEN1-203ENST00000394157 KRTAP5-8O75690 187 aa4.9□□□□□ -1.63
PSEN1-203ENST00000394157 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
PSEN1-203ENST00000394157 LCE1CQ5T751 118 aa4.48□□□□□ -1.69
PSEN1-203ENST00000394157 LCE1BQ5T7P3 118 aa4.48□□□□□ -1.69
PSEN1-203ENST00000394157 INE1O15225 51 aa4.22□□□□□ -1.73
PSEN1-203ENST00000394157 KRTAP21-2Q3LI59 83 aa3.83□□□□□ -1.8
PSEN1-203ENST00000394157 PRM1P04553 51 aa3.78□□□□□ -1.8
PSEN1-203ENST00000394157 PHGR1C9JFL3 82 aa3.51□□□□□ -1.85
PSEN1-203ENST00000394157 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
PSEN1-203ENST00000394157 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
PSEN1-203ENST00000394157 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms