RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 PRM1P04553 51 aa1.84□□□□□ -2.11
GAPVD1-206ENST00000394104 KRTAP4-7Q9BYR0 210 aa1.84□□□□□ -2.12
GAPVD1-206ENST00000394104 LRP1Q07954 4544 aaKnown RBP1.81□□□□□ -2.12
GAPVD1-206ENST00000394104 LCE1BQ5T7P3 118 aa1.81□□□□□ -2.12
GAPVD1-206ENST00000394104 KRTAP9-8Q9BYQ0 159 aa1.81□□□□□ -2.12
GAPVD1-206ENST00000394104 SPRR5A0A1B0GTR4 108 aa1.81□□□□□ -2.12
GAPVD1-206ENST00000394104 KRTAP19-3Q7Z4W3 81 aa1.8□□□□□ -2.12
GAPVD1-206ENST00000394104 LCE1DQ5T752 114 aa1.79□□□□□ -2.12
GAPVD1-206ENST00000394104 LRP2P98164 4655 aa1.78□□□□□ -2.12
GAPVD1-206ENST00000394104 KRTAP9-3Q9BYQ3 159 aa1.78□□□□□ -2.12
GAPVD1-206ENST00000394104 MT1LQ93083 61 aa1.77□□□□□ -2.13
GAPVD1-206ENST00000394104 KRTAP9-7A8MTY7 169 aa1.76□□□□□ -2.13
GAPVD1-206ENST00000394104 FAT4Q6V0I7 4981 aa1.76□□□□□ -2.13
GAPVD1-206ENST00000394104 MT3P25713 68 aa1.75□□□□□ -2.13
GAPVD1-206ENST00000394104 FLGP20930 4061 aaPredicted RBP1.75□□□□□ -2.13
GAPVD1-206ENST00000394104 MT1EP04732 61 aa1.74□□□□□ -2.13
GAPVD1-206ENST00000394104 KRTAP4-3Q9BYR4 195 aa1.72□□□□□ -2.13
GAPVD1-206ENST00000394104 MUC17Q685J3 4493 aa1.71□□□□□ -2.14
GAPVD1-206ENST00000394104 KRTAP19-6Q3LI70 58 aa1.71□□□□□ -2.14
GAPVD1-206ENST00000394104 MT1MQ8N339 61 aa1.71□□□□□ -2.14
GAPVD1-206ENST00000394104 LCE5AQ5TCM9 118 aa1.7□□□□□ -2.14
GAPVD1-206ENST00000394104 MUC2Q02817 5179 aa1.7□□□□□ -2.14
GAPVD1-206ENST00000394104 KRTAP20-1Q3LI63 56 aa1.68□□□□□ -2.14
GAPVD1-206ENST00000394104 KRTAP4-9Q9BYQ8 210 aa1.68□□□□□ -2.14
GAPVD1-206ENST00000394104 SYNE1Q8NF91 8797 aaKnown RBP1.68□□□□□ -2.14
GAPVD1-206ENST00000394104 KRTAP4-2Q9BYR5 136 aa1.67□□□□□ -2.14
GAPVD1-206ENST00000394104 KRTAP4-11Q9BYQ6 195 aa1.66□□□□□ -2.14
GAPVD1-206ENST00000394104 KRTAP19-2Q3LHN2 52 aa1.66□□□□□ -2.14
GAPVD1-206ENST00000394104 GPR98Q8WXG9 6306 aa1.65□□□□□ -2.15
GAPVD1-206ENST00000394104 MDN1Q9NU22 5596 aa1.64□□□□□ -2.15
GAPVD1-206ENST00000394104 KRTAP6-3Q3LI67 103 aa1.62□□□□□ -2.15
GAPVD1-206ENST00000394104 FSIP2Q5CZC0 6907 aa1.61□□□□□ -2.15
GAPVD1-206ENST00000394104 LCE1CQ5T751 118 aa1.61□□□□□ -2.15
GAPVD1-206ENST00000394104 LCE1EQ5T753 118 aa1.61□□□□□ -2.15
GAPVD1-206ENST00000394104 LCE1FQ5T754 118 aa1.61□□□□□ -2.15
GAPVD1-206ENST00000394104 LCE1AQ5T7P2 110 aa1.61□□□□□ -2.15
GAPVD1-206ENST00000394104 SSPOA2VEC9 5147 aa1.61□□□□□ -2.15
GAPVD1-206ENST00000394104 KRTAP2-3P0C7H8 128 aa1.6□□□□□ -2.15
GAPVD1-206ENST00000394104 KRTAP2-4Q9BYR9 128 aa1.6□□□□□ -2.15
GAPVD1-206ENST00000394104 KRTAP2-1Q9BYU5 128 aa1.58□□□□□ -2.16
GAPVD1-206ENST00000394104 MT1AP04731 61 aa1.58□□□□□ -2.16
GAPVD1-206ENST00000394104 KRTAP6-2Q3LI66 62 aa1.57□□□□□ -2.16
GAPVD1-206ENST00000394104 KRTAP2-2Q9BYT5 123 aa1.53□□□□□ -2.17
GAPVD1-206ENST00000394104 KRTAP6-1Q3LI64 71 aa1.51□□□□□ -2.17
GAPVD1-206ENST00000394104 KRTAP5-3Q6L8H2 238 aa1.51□□□□□ -2.17
GAPVD1-206ENST00000394104 SYNE2Q8WXH0 6885 aaKnown RBP1.51□□□□□ -2.17
GAPVD1-206ENST00000394104 MUC12Q9UKN1 5478 aa1.51□□□□□ -2.17
GAPVD1-206ENST00000394104 AHNAK2Q8IVF2 5795 aa1.51□□□□□ -2.17
GAPVD1-206ENST00000394104 KRTAP19-7Q3SYF9 63 aa1.5□□□□□ -2.17
GAPVD1-206ENST00000394104 FCGBPQ9Y6R7 5405 aaPredicted RBP1.49□□□□□ -2.17
GAPVD1-206ENST00000394104 NEBP20929 6669 aa1.48□□□□□ -2.17
GAPVD1-206ENST00000394104 KMT2DO14686 5537 aa1.46□□□□□ -2.18
GAPVD1-206ENST00000394104 OBSCNQ5VST9 7968 aa1.43□□□□□ -2.18
GAPVD1-206ENST00000394104 HMCN1Q96RW7 5635 aa1.42□□□□□ -2.18
GAPVD1-206ENST00000394104 MACF1Q9UPN3 7388 aaKnown RBP1.42□□□□□ -2.18
GAPVD1-206ENST00000394104 KRTAP9-6A8MVA2 160 aa1.4□□□□□ -2.18
GAPVD1-206ENST00000394104 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
GAPVD1-206ENST00000394104 DSTQ03001 7570 aaKnown RBP1.35□□□□□ -2.19
GAPVD1-206ENST00000394104 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.19
GAPVD1-206ENST00000394104 KRTAP20-2Q3LI61 65 aa1.33□□□□□ -2.2
GAPVD1-206ENST00000394104 KRTAP5-9P26371 169 aa1.33□□□□□ -2.2
GAPVD1-206ENST00000394104 KRTAP5-2Q701N4 177 aa1.32□□□□□ -2.2
GAPVD1-206ENST00000394104 KRTAP4-4Q9BYR3 166 aa1.27□□□□□ -2.21
GAPVD1-206ENST00000394104 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.24□□□□□ -2.21
GAPVD1-206ENST00000394104 MUC19Q7Z5P9 8384 aa1.21□□□□□ -2.22
GAPVD1-206ENST00000394104 KRTAP5-4Q6L8H1 288 aa1.18□□□□□ -2.22
GAPVD1-206ENST00000394104 KRTAP5-11Q6L8G4 156 aa1.13□□□□□ -2.23
GAPVD1-206ENST00000394104 MUC5ACP98088 5654 aa1.13□□□□□ -2.23
GAPVD1-206ENST00000394104 KRTAP5-5Q701N2 237 aaPredicted RBP1.07□□□□□ -2.24
GAPVD1-206ENST00000394104 KRTAP5-1Q6L8H4 278 aa1.03□□□□□ -2.24
GAPVD1-206ENST00000394104 KRTAP5-8O75690 187 aa0.96□□□□□ -2.26
GAPVD1-206ENST00000394104 KRTAP5-7Q6L8G8 165 aa0.92□□□□□ -2.26
GAPVD1-206ENST00000394104 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
GAPVD1-206ENST00000394104 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
GAPVD1-206ENST00000394104 KRTAP21-2Q3LI59 83 aa0.69□□□□□ -2.3
GAPVD1-206ENST00000394104 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
GAPVD1-206ENST00000394104 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 7.3 ms