RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 GPR98Q8WXG9 6306 aa6.67□□□□□ -1.34
PDLIM7-205ENST00000393551 KRTAP19-5Q3LI72 72 aa6.65□□□□□ -1.34
PDLIM7-205ENST00000393551 KRTAP12-1P59990 96 aa6.63□□□□□ -1.35
PDLIM7-205ENST00000393551 SPINT4Q6UDR6 99 aa6.62□□□□□ -1.35
PDLIM7-205ENST00000393551 PRO0628Q9UI54 55 aa6.61□□□□□ -1.35
PDLIM7-205ENST00000393551 MT1GP13640 62 aa6.59□□□□□ -1.35
PDLIM7-205ENST00000393551 LCE1DQ5T752 114 aa6.52□□□□□ -1.37
PDLIM7-205ENST00000393551 MT1MQ8N339 61 aa6.51□□□□□ -1.37
PDLIM7-205ENST00000393551 MT1LQ93083 61 aa6.49□□□□□ -1.37
PDLIM7-205ENST00000393551 PP632Q6XCG6 107 aa6.47□□□□□ -1.37
PDLIM7-205ENST00000393551 HMCN1Q96RW7 5635 aa6.45□□□□□ -1.38
PDLIM7-205ENST00000393551 PMAIP1Q13794 54 aa6.42□□□□□ -1.38
PDLIM7-205ENST00000393551 MT4P47944 62 aa6.41□□□□□ -1.38
PDLIM7-205ENST00000393551 LCE4AQ5TA78 99 aa6.41□□□□□ -1.38
PDLIM7-205ENST00000393551 KRTAP4-3Q9BYR4 195 aa6.41□□□□□ -1.38
PDLIM7-205ENST00000393551 LCE3AQ5TA76 89 aa6.4□□□□□ -1.38
PDLIM7-205ENST00000393551 C10orf95Q9H7T3 257 aa6.39□□□□□ -1.39
PDLIM7-205ENST00000393551 ROMO1P60602 79 aa6.33□□□□□ -1.4
PDLIM7-205ENST00000393551 KRTAP5-4Q6L8H1 288 aa6.33□□□□□ -1.4
PDLIM7-205ENST00000393551 TNP1P09430 55 aa6.29□□□□□ -1.4
PDLIM7-205ENST00000393551 AHNAK2Q8IVF2 5795 aa6.27□□□□□ -1.4
PDLIM7-205ENST00000393551 KRTAP4-6Q9BYQ5 205 aa6.25□□□□□ -1.41
PDLIM7-205ENST00000393551 KRTAP25-1Q3LHN0 102 aa6.21□□□□□ -1.42
PDLIM7-205ENST00000393551 KRTAP4-7Q9BYR0 210 aa6.21□□□□□ -1.42
PDLIM7-205ENST00000393551 KRTAP5-10Q6L8G5 202 aa6.16□□□□□ -1.42
PDLIM7-205ENST00000393551 KRTAP12-3P60328 96 aa6.13□□□□□ -1.43
PDLIM7-205ENST00000393551 KTN1-AS1Q86SY8 53 aa6.12□□□□□ -1.43
PDLIM7-205ENST00000393551 KRTAP23-1A1A580 65 aa6.07□□□□□ -1.44
PDLIM7-205ENST00000393551 KRTAP5-5Q701N2 237 aaPredicted RBP6.02□□□□□ -1.45
PDLIM7-205ENST00000393551 KRTAP20-2Q3LI61 65 aa5.97□□□□□ -1.45
PDLIM7-205ENST00000393551 KRTAP5-3Q6L8H2 238 aa5.96□□□□□ -1.46
PDLIM7-205ENST00000393551 KRTAP5-7Q6L8G8 165 aa5.92□□□□□ -1.46
PDLIM7-205ENST00000393551 LOC100996750A0A140TA64 210 aa5.9□□□□□ -1.46
PDLIM7-205ENST00000393551 PRAC1Q96KF2 57 aa5.9□□□□□ -1.46
PDLIM7-205ENST00000393551 SPRR5A0A1B0GTR4 108 aa5.89□□□□□ -1.47
PDLIM7-205ENST00000393551 SYNE1Q8NF91 8797 aaKnown RBP5.88□□□□□ -1.47
PDLIM7-205ENST00000393551 KRTAP12-4P60329 112 aa5.81□□□□□ -1.48
PDLIM7-205ENST00000393551 KRTAP19-4Q3LI73 84 aa5.7□□□□□ -1.5
PDLIM7-205ENST00000393551 KRTAP15-1Q3LI76 137 aa5.65□□□□□ -1.5
PDLIM7-205ENST00000393551 LCE3CQ5T5A8 94 aa5.63□□□□□ -1.51
PDLIM7-205ENST00000393551 KRTAP6-1Q3LI64 71 aa5.52□□□□□ -1.53
PDLIM7-205ENST00000393551 KRTAP5-2Q701N4 177 aa5.52□□□□□ -1.53
PDLIM7-205ENST00000393551 MT1AP04731 61 aa5.5□□□□□ -1.53
PDLIM7-205ENST00000393551 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
PDLIM7-205ENST00000393551 KRTAP9-6A8MVA2 160 aa5.41□□□□□ -1.54
PDLIM7-205ENST00000393551 KRTAP5-8O75690 187 aa5.34□□□□□ -1.55
PDLIM7-205ENST00000393551 KRTAP9-4Q9BYQ2 154 aa5.34□□□□□ -1.55
PDLIM7-205ENST00000393551 KRTAP6-2Q3LI66 62 aa5.29□□□□□ -1.56
PDLIM7-205ENST00000393551 OBSCNQ5VST9 7968 aa5.28□□□□□ -1.56
PDLIM7-205ENST00000393551 MUC5BQ9HC84 5762 aaPredicted RBP5.18□□□□□ -1.58
PDLIM7-205ENST00000393551 MUC5ACP98088 5654 aa5.17□□□□□ -1.58
PDLIM7-205ENST00000393551 AHNAKQ09666 5890 aaKnown RBP5.16□□□□□ -1.58
PDLIM7-205ENST00000393551 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
PDLIM7-205ENST00000393551 MT3P25713 68 aa5.01□□□□□ -1.61
PDLIM7-205ENST00000393551 LUZP6Q538Z0 58 aa5□□□□□ -1.61
PDLIM7-205ENST00000393551 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
PDLIM7-205ENST00000393551 H3BS24 57 aa4.71□□□□□ -1.66
PDLIM7-205ENST00000393551 NDUFAF8A1L188 74 aa4.66□□□□□ -1.66
PDLIM7-205ENST00000393551 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
PDLIM7-205ENST00000393551 KRTAP4-2Q9BYR5 136 aa4.47□□□□□ -1.69
PDLIM7-205ENST00000393551 LCE1BQ5T7P3 118 aa4.4□□□□□ -1.71
PDLIM7-205ENST00000393551 LCE1CQ5T751 118 aa4.34□□□□□ -1.71
PDLIM7-205ENST00000393551 A0A0A0MQY5 61 aa4.21□□□□□ -1.74
PDLIM7-205ENST00000393551 KRTAP4-12Q9BQ66 201 aa4.11□□□□□ -1.75
PDLIM7-205ENST00000393551 INE1O15225 51 aa4□□□□□ -1.77
PDLIM7-205ENST00000393551 LCE3DQ9BYE3 92 aa4□□□□□ -1.77
PDLIM7-205ENST00000393551 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
PDLIM7-205ENST00000393551 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
PDLIM7-205ENST00000393551 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
PDLIM7-205ENST00000393551 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
PDLIM7-205ENST00000393551 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
PDLIM7-205ENST00000393551 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
PDLIM7-205ENST00000393551 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
PDLIM7-205ENST00000393551 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
PDLIM7-205ENST00000393551 PRM1P04553 51 aa3.23□□□□□ -1.89
PDLIM7-205ENST00000393551 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
PDLIM7-205ENST00000393551 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 8.8 ms