RNA–Protein interactions for RNA: ENST00000393409.2

PLXNA1-201, Transcript of plexin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA1, Length 9,066 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA1-201ENST00000393409 LCE1DQ5T752 114 aa3.74□□□□□ -1.81
PLXNA1-201ENST00000393409 KRTAP9-6A0A140TA67 174 aa3.74□□□□□ -1.81
PLXNA1-201ENST00000393409 PCLOQ9Y6V0 5065 aa3.72□□□□□ -1.81
PLXNA1-201ENST00000393409 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
PLXNA1-201ENST00000393409 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
PLXNA1-201ENST00000393409 KRTAP19-7Q3SYF9 63 aa3.71□□□□□ -1.81
PLXNA1-201ENST00000393409 HYDINQ4G0P3 5121 aa3.67□□□□□ -1.82
PLXNA1-201ENST00000393409 KRTAP4-3Q9BYR4 195 aa3.67□□□□□ -1.82
PLXNA1-201ENST00000393409 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.82
PLXNA1-201ENST00000393409 HERC2O95714 4834 aa3.57□□□□□ -1.84
PLXNA1-201ENST00000393409 LCE2AQ5TA79 106 aaPredicted RBP3.56□□□□□ -1.84
PLXNA1-201ENST00000393409 KRTAP4-9Q9BYQ8 210 aa3.56□□□□□ -1.84
PLXNA1-201ENST00000393409 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
PLXNA1-201ENST00000393409 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
PLXNA1-201ENST00000393409 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
PLXNA1-201ENST00000393409 LCE5AQ5TCM9 118 aa3.55□□□□□ -1.84
PLXNA1-201ENST00000393409 KRTAP9-7A8MTY7 169 aa3.54□□□□□ -1.84
PLXNA1-201ENST00000393409 KIAA1109Q2LD37 5005 aa3.53□□□□□ -1.84
PLXNA1-201ENST00000393409 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
PLXNA1-201ENST00000393409 BIRC6Q9NR09 4857 aa3.49□□□□□ -1.85
PLXNA1-201ENST00000393409 KRTAP6-1Q3LI64 71 aa3.44□□□□□ -1.86
PLXNA1-201ENST00000393409 KRTAP9-4Q9BYQ2 154 aa3.42□□□□□ -1.86
PLXNA1-201ENST00000393409 HERC1Q15751 4861 aa3.4□□□□□ -1.86
PLXNA1-201ENST00000393409 KRTAP2-2Q9BYT5 123 aa3.4□□□□□ -1.86
PLXNA1-201ENST00000393409 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.35□□□□□ -1.87
PLXNA1-201ENST00000393409 SYNE2Q8WXH0 6885 aaKnown RBP3.34□□□□□ -1.87
PLXNA1-201ENST00000393409 HMCN2Q8NDA2 5059 aa3.32□□□□□ -1.88
PLXNA1-201ENST00000393409 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
PLXNA1-201ENST00000393409 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
PLXNA1-201ENST00000393409 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
PLXNA1-201ENST00000393409 EPPK1P58107 5090 aaKnown RBP3.29□□□□□ -1.88
PLXNA1-201ENST00000393409 KRTAP9-9Q9BYP9 154 aa3.19□□□□□ -1.9
PLXNA1-201ENST00000393409 RNF213Q63HN8 5207 aa3.16□□□□□ -1.9
PLXNA1-201ENST00000393409 SYNE1Q8NF91 8797 aaKnown RBP3.15□□□□□ -1.91
PLXNA1-201ENST00000393409 UBR4Q5T4S7 5183 aa3.05□□□□□ -1.92
PLXNA1-201ENST00000393409 FSIP2Q5CZC0 6907 aa3.03□□□□□ -1.92
PLXNA1-201ENST00000393409 FAT4Q6V0I7 4981 aa3.01□□□□□ -1.93
PLXNA1-201ENST00000393409 MUC2Q02817 5179 aa2.97□□□□□ -1.93
PLXNA1-201ENST00000393409 ABCA13Q86UQ4 5058 aa2.95□□□□□ -1.94
PLXNA1-201ENST00000393409 KRTAP5-9P26371 169 aa2.92□□□□□ -1.94
PLXNA1-201ENST00000393409 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
PLXNA1-201ENST00000393409 KMT2DO14686 5537 aa2.79□□□□□ -1.96
PLXNA1-201ENST00000393409 NEBP20929 6669 aa2.76□□□□□ -1.97
PLXNA1-201ENST00000393409 KRTAP20-2Q3LI61 65 aa2.75□□□□□ -1.97
PLXNA1-201ENST00000393409 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
PLXNA1-201ENST00000393409 OBSCNQ5VST9 7968 aa2.72□□□□□ -1.97
PLXNA1-201ENST00000393409 KRTAP4-6Q9BYQ5 205 aa2.68□□□□□ -1.98
PLXNA1-201ENST00000393409 KRTAP5-4Q6L8H1 288 aa2.67□□□□□ -1.98
PLXNA1-201ENST00000393409 FCGBPQ9Y6R7 5405 aaPredicted RBP2.61□□□□□ -1.99
PLXNA1-201ENST00000393409 USH2AO75445 5202 aa2.56□□□□□ -2
PLXNA1-201ENST00000393409 DSTQ03001 7570 aaKnown RBP2.55□□□□□ -2
PLXNA1-201ENST00000393409 MACF1Q9UPN3 7388 aaKnown RBP2.5□□□□□ -2.01
PLXNA1-201ENST00000393409 MDN1Q9NU22 5596 aa2.47□□□□□ -2.01
PLXNA1-201ENST00000393409 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
PLXNA1-201ENST00000393409 SSPOA2VEC9 5147 aa2.43□□□□□ -2.02
PLXNA1-201ENST00000393409 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
PLXNA1-201ENST00000393409 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
PLXNA1-201ENST00000393409 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
PLXNA1-201ENST00000393409 KRTAP5-3Q6L8H2 238 aa2.32□□□□□ -2.04
PLXNA1-201ENST00000393409 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
PLXNA1-201ENST00000393409 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
PLXNA1-201ENST00000393409 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
PLXNA1-201ENST00000393409 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
PLXNA1-201ENST00000393409 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
PLXNA1-201ENST00000393409 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
PLXNA1-201ENST00000393409 KRTAP5-8O75690 187 aa2□□□□□ -2.09
PLXNA1-201ENST00000393409 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
PLXNA1-201ENST00000393409 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
PLXNA1-201ENST00000393409 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
PLXNA1-201ENST00000393409 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
PLXNA1-201ENST00000393409 KRTAP5-1Q6L8H4 278 aa1.82□□□□□ -2.12
PLXNA1-201ENST00000393409 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
PLXNA1-201ENST00000393409 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.78□□□□□ -2.12
PLXNA1-201ENST00000393409 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
PLXNA1-201ENST00000393409 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
PLXNA1-201ENST00000393409 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
PLXNA1-201ENST00000393409 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 13.4 ms