RNA–Protein interactions for RNA: ENST00000393328.6

SPOP-202, Transcript of speckle type BTB/POZ protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOP, Length 2,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-202ENST00000393328 KRTAP8-1Q8IUC2 63 aa4.34□□□□□ -1.72
SPOP-202ENST00000393328 INE1O15225 51 aa4.29□□□□□ -1.72
SPOP-202ENST00000393328 SSPOA2VEC9 5147 aa4.24□□□□□ -1.73
SPOP-202ENST00000393328 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
SPOP-202ENST00000393328 KRTAP19-5Q3LI72 72 aa4.19□□□□□ -1.74
SPOP-202ENST00000393328 KRTAP9-6A8MVA2 160 aa4.09□□□□□ -1.75
SPOP-202ENST00000393328 LCE3CQ5T5A8 94 aa4.08□□□□□ -1.76
SPOP-202ENST00000393328 MUC12Q9UKN1 5478 aa4.01□□□□□ -1.77
SPOP-202ENST00000393328 FCGBPQ9Y6R7 5405 aaPredicted RBP4.01□□□□□ -1.77
SPOP-202ENST00000393328 KRTAP19-7Q3SYF9 63 aa4□□□□□ -1.77
SPOP-202ENST00000393328 HMCN1Q96RW7 5635 aa3.95□□□□□ -1.78
SPOP-202ENST00000393328 KRTAP19-6Q3LI70 58 aa3.94□□□□□ -1.78
SPOP-202ENST00000393328 DSTQ03001 7570 aaKnown RBP3.91□□□□□ -1.78
SPOP-202ENST00000393328 MT1EP04732 61 aa3.89□□□□□ -1.79
SPOP-202ENST00000393328 MT1LQ93083 61 aa3.86□□□□□ -1.79
SPOP-202ENST00000393328 MACF1Q9UPN3 7388 aaKnown RBP3.85□□□□□ -1.79
SPOP-202ENST00000393328 LCE4AQ5TA78 99 aa3.85□□□□□ -1.79
SPOP-202ENST00000393328 KRTAP4-3Q9BYR4 195 aa3.84□□□□□ -1.8
SPOP-202ENST00000393328 CRCT1Q9UGL9 99 aa3.83□□□□□ -1.8
SPOP-202ENST00000393328 KRTAP2-3P0C7H8 128 aa3.82□□□□□ -1.8
SPOP-202ENST00000393328 KRTAP2-4Q9BYR9 128 aa3.82□□□□□ -1.8
SPOP-202ENST00000393328 KRTAP2-1Q9BYU5 128 aa3.82□□□□□ -1.8
SPOP-202ENST00000393328 SYNE2Q8WXH0 6885 aaKnown RBP3.8□□□□□ -1.8
SPOP-202ENST00000393328 SPRR2FQ96RM1 72 aa3.74□□□□□ -1.81
SPOP-202ENST00000393328 SYNE1Q8NF91 8797 aaKnown RBP3.74□□□□□ -1.81
SPOP-202ENST00000393328 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
SPOP-202ENST00000393328 MT1GP13640 62 aa3.7□□□□□ -1.82
SPOP-202ENST00000393328 MDN1Q9NU22 5596 aa3.7□□□□□ -1.82
SPOP-202ENST00000393328 KRTAP9-7A8MTY7 169 aa3.7□□□□□ -1.82
SPOP-202ENST00000393328 KRTAP19-3Q7Z4W3 81 aa3.66□□□□□ -1.82
SPOP-202ENST00000393328 MT1MQ8N339 61 aa3.65□□□□□ -1.82
SPOP-202ENST00000393328 KRTAP12-4P60329 112 aa3.64□□□□□ -1.83
SPOP-202ENST00000393328 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
SPOP-202ENST00000393328 LCE5AQ5TCM9 118 aa3.54□□□□□ -1.84
SPOP-202ENST00000393328 KRTAP19-4Q3LI73 84 aa3.53□□□□□ -1.84
SPOP-202ENST00000393328 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
SPOP-202ENST00000393328 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
SPOP-202ENST00000393328 SPRR2EP22531 72 aa3.43□□□□□ -1.86
SPOP-202ENST00000393328 SPRR2BP35325 72 aa3.43□□□□□ -1.86
SPOP-202ENST00000393328 SPRR2AP35326 72 aa3.43□□□□□ -1.86
SPOP-202ENST00000393328 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
SPOP-202ENST00000393328 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
SPOP-202ENST00000393328 PRM1P04553 51 aa3.28□□□□□ -1.88
SPOP-202ENST00000393328 SPRR2DP22532 72 aa3.27□□□□□ -1.89
SPOP-202ENST00000393328 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
SPOP-202ENST00000393328 MT1AP04731 61 aa3.2□□□□□ -1.9
SPOP-202ENST00000393328 KRTAP6-3Q3LI67 103 aa3.18□□□□□ -1.9
SPOP-202ENST00000393328 KRTAP5-5Q701N2 237 aaPredicted RBP3.18□□□□□ -1.9
SPOP-202ENST00000393328 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
SPOP-202ENST00000393328 GPR98Q8WXG9 6306 aa3.16□□□□□ -1.9
SPOP-202ENST00000393328 NEBP20929 6669 aa3.07□□□□□ -1.92
SPOP-202ENST00000393328 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
SPOP-202ENST00000393328 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.93
SPOP-202ENST00000393328 MT4P47944 62 aa2.99□□□□□ -1.93
SPOP-202ENST00000393328 MT3P25713 68 aa2.9□□□□□ -1.94
SPOP-202ENST00000393328 KRTAP2-2Q9BYT5 123 aa2.82□□□□□ -1.96
SPOP-202ENST00000393328 KRTAP20-1Q3LI63 56 aa2.79□□□□□ -1.96
SPOP-202ENST00000393328 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
SPOP-202ENST00000393328 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
SPOP-202ENST00000393328 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
SPOP-202ENST00000393328 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
SPOP-202ENST00000393328 KRTAP5-11Q6L8G4 156 aa2.7□□□□□ -1.98
SPOP-202ENST00000393328 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
SPOP-202ENST00000393328 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
SPOP-202ENST00000393328 MUC5ACP98088 5654 aa2.57□□□□□ -2
SPOP-202ENST00000393328 KRTAP5-8O75690 187 aa2.54□□□□□ -2
SPOP-202ENST00000393328 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
SPOP-202ENST00000393328 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
SPOP-202ENST00000393328 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
SPOP-202ENST00000393328 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
SPOP-202ENST00000393328 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
SPOP-202ENST00000393328 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
SPOP-202ENST00000393328 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
SPOP-202ENST00000393328 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
SPOP-202ENST00000393328 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
SPOP-202ENST00000393328 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
SPOP-202ENST00000393328 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms