RNA–Protein interactions for RNA: ENST00000393238.7

TMCC1-201, Transcript of transmembrane and coiled-coil domain family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC1, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1-201ENST00000393238 MT3P25713 68 aa3.02□□□□□ -1.93
TMCC1-201ENST00000393238 MT4P47944 62 aa3.02□□□□□ -1.93
TMCC1-201ENST00000393238 FLGP20930 4061 aaPredicted RBP3□□□□□ -1.93
TMCC1-201ENST00000393238 KRTAP2-3P0C7H8 128 aa2.99□□□□□ -1.93
TMCC1-201ENST00000393238 KRTAP2-4Q9BYR9 128 aa2.99□□□□□ -1.93
TMCC1-201ENST00000393238 TNXBP22105 4242 aa2.99□□□□□ -1.93
TMCC1-201ENST00000393238 LCE1AQ5T7P2 110 aa2.99□□□□□ -1.93
TMCC1-201ENST00000393238 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
TMCC1-201ENST00000393238 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.94□□□□□ -1.94
TMCC1-201ENST00000393238 RNF213Q63HN8 5207 aa2.94□□□□□ -1.94
TMCC1-201ENST00000393238 LPAP08519 4548 aa2.93□□□□□ -1.94
TMCC1-201ENST00000393238 FAT4Q6V0I7 4981 aa2.9□□□□□ -1.95
TMCC1-201ENST00000393238 UBR4Q5T4S7 5183 aa2.88□□□□□ -1.95
TMCC1-201ENST00000393238 KRTAP2-2Q9BYT5 123 aa2.87□□□□□ -1.95
TMCC1-201ENST00000393238 KRTAP2-1Q9BYU5 128 aa2.87□□□□□ -1.95
TMCC1-201ENST00000393238 KRTAP4-7Q9BYR0 210 aa2.87□□□□□ -1.95
TMCC1-201ENST00000393238 LCE4AQ5TA78 99 aa2.86□□□□□ -1.95
TMCC1-201ENST00000393238 MT1AP04731 61 aa2.84□□□□□ -1.95
TMCC1-201ENST00000393238 SYNE2Q8WXH0 6885 aaKnown RBP2.81□□□□□ -1.96
TMCC1-201ENST00000393238 KRTAP19-7Q3SYF9 63 aa2.81□□□□□ -1.96
TMCC1-201ENST00000393238 HMCN2Q8NDA2 5059 aa2.81□□□□□ -1.96
TMCC1-201ENST00000393238 LCE1DQ5T752 114 aa2.78□□□□□ -1.96
TMCC1-201ENST00000393238 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
TMCC1-201ENST00000393238 KRTAP4-3Q9BYR4 195 aa2.74□□□□□ -1.97
TMCC1-201ENST00000393238 LOC100996750A0A140TA64 210 aa2.72□□□□□ -1.97
TMCC1-201ENST00000393238 LCE5AQ5TCM9 118 aa2.7□□□□□ -1.98
TMCC1-201ENST00000393238 FSIP2Q5CZC0 6907 aa2.65□□□□□ -1.99
TMCC1-201ENST00000393238 KRTAP9-4Q9BYQ2 154 aa2.62□□□□□ -1.99
TMCC1-201ENST00000393238 KRTAP4-9Q9BYQ8 210 aa2.62□□□□□ -1.99
TMCC1-201ENST00000393238 MUC2Q02817 5179 aa2.61□□□□□ -1.99
TMCC1-201ENST00000393238 KRTAP6-2Q3LI66 62 aa2.56□□□□□ -2
TMCC1-201ENST00000393238 PRM1P04553 51 aa2.54□□□□□ -2
TMCC1-201ENST00000393238 KRTAP5-9P26371 169 aa2.54□□□□□ -2
TMCC1-201ENST00000393238 KRTAP6-1Q3LI64 71 aa2.54□□□□□ -2
TMCC1-201ENST00000393238 NEBP20929 6669 aa2.52□□□□□ -2.01
TMCC1-201ENST00000393238 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
TMCC1-201ENST00000393238 SYNE1Q8NF91 8797 aaKnown RBP2.47□□□□□ -2.01
TMCC1-201ENST00000393238 SSPOA2VEC9 5147 aa2.42□□□□□ -2.02
TMCC1-201ENST00000393238 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
TMCC1-201ENST00000393238 LCE1EQ5T753 118 aa2.42□□□□□ -2.02
TMCC1-201ENST00000393238 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
TMCC1-201ENST00000393238 USH2AO75445 5202 aa2.38□□□□□ -2.03
TMCC1-201ENST00000393238 OBSCNQ5VST9 7968 aa2.33□□□□□ -2.04
TMCC1-201ENST00000393238 KRTAP9-6A8MVA2 160 aa2.33□□□□□ -2.04
TMCC1-201ENST00000393238 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
TMCC1-201ENST00000393238 MACF1Q9UPN3 7388 aaKnown RBP2.26□□□□□ -2.05
TMCC1-201ENST00000393238 KRTAP5-4Q6L8H1 288 aa2.24□□□□□ -2.05
TMCC1-201ENST00000393238 KRTAP4-6Q9BYQ5 205 aa2.23□□□□□ -2.05
TMCC1-201ENST00000393238 FCGBPQ9Y6R7 5405 aaPredicted RBP2.22□□□□□ -2.05
TMCC1-201ENST00000393238 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
TMCC1-201ENST00000393238 KMT2DO14686 5537 aa2.17□□□□□ -2.06
TMCC1-201ENST00000393238 MDN1Q9NU22 5596 aa2.14□□□□□ -2.07
TMCC1-201ENST00000393238 KRTAP4-11Q9BYQ6 195 aa2.09□□□□□ -2.07
TMCC1-201ENST00000393238 DSTQ03001 7570 aaKnown RBP2.09□□□□□ -2.07
TMCC1-201ENST00000393238 KRTAP5-3Q6L8H2 238 aa1.97□□□□□ -2.09
TMCC1-201ENST00000393238 KRTAP5-5Q701N2 237 aaPredicted RBP1.95□□□□□ -2.1
TMCC1-201ENST00000393238 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
TMCC1-201ENST00000393238 MUC12Q9UKN1 5478 aa1.92□□□□□ -2.1
TMCC1-201ENST00000393238 KRTAP4-12Q9BQ66 201 aa1.89□□□□□ -2.11
TMCC1-201ENST00000393238 KRTAP4-2Q9BYR5 136 aa1.89□□□□□ -2.11
TMCC1-201ENST00000393238 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.11
TMCC1-201ENST00000393238 KRTAP4-4Q9BYR3 166 aa1.8□□□□□ -2.12
TMCC1-201ENST00000393238 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
TMCC1-201ENST00000393238 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
TMCC1-201ENST00000393238 KRTAP5-8O75690 187 aa1.74□□□□□ -2.13
TMCC1-201ENST00000393238 KRTAP5-2Q701N4 177 aa1.69□□□□□ -2.14
TMCC1-201ENST00000393238 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
TMCC1-201ENST00000393238 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
TMCC1-201ENST00000393238 MUC5BQ9HC84 5762 aaPredicted RBP1.53□□□□□ -2.16
TMCC1-201ENST00000393238 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.17
TMCC1-201ENST00000393238 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
TMCC1-201ENST00000393238 KRTAP5-10Q6L8G5 202 aa1.49□□□□□ -2.17
TMCC1-201ENST00000393238 KRTAP5-1Q6L8H4 278 aa1.46□□□□□ -2.18
TMCC1-201ENST00000393238 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.35□□□□□ -2.19
TMCC1-201ENST00000393238 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
TMCC1-201ENST00000393238 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
TMCC1-201ENST00000393238 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 651.8 ms