RNA–Protein interactions for RNA: ENST00000392824.8

CSHL1-204, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSHL1, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-204ENST00000392824 LCE5AQ5TCM9 118 aa5.84□□□□□ -1.47
CSHL1-204ENST00000392824 LCE3BQ5TA77 95 aa5.82□□□□□ -1.48
CSHL1-204ENST00000392824 MT1GP13640 62 aa5.78□□□□□ -1.48
CSHL1-204ENST00000392824 CDC42SE1Q9NRR8 79 aa5.78□□□□□ -1.48
CSHL1-204ENST00000392824 PP632Q6XCG6 107 aa5.76□□□□□ -1.49
CSHL1-204ENST00000392824 MT1LQ93083 61 aa5.74□□□□□ -1.49
CSHL1-204ENST00000392824 KRTAP12-3P60328 96 aa5.73□□□□□ -1.49
CSHL1-204ENST00000392824 ROMO1P60602 79 aa5.68□□□□□ -1.5
CSHL1-204ENST00000392824 KRTAP23-1A1A580 65 aa5.66□□□□□ -1.5
CSHL1-204ENST00000392824 MT1MQ8N339 61 aa5.66□□□□□ -1.5
CSHL1-204ENST00000392824 DSTQ03001 7570 aaKnown RBP5.63□□□□□ -1.51
CSHL1-204ENST00000392824 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
CSHL1-204ENST00000392824 KRTAP4-7Q9BYR0 210 aa5.47□□□□□ -1.53
CSHL1-204ENST00000392824 KRTAP19-4Q3LI73 84 aa5.45□□□□□ -1.54
CSHL1-204ENST00000392824 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
CSHL1-204ENST00000392824 BRK1Q8WUW1 75 aa5.44□□□□□ -1.54
CSHL1-204ENST00000392824 KRTAP4-9Q9BYQ8 210 aa5.35□□□□□ -1.55
CSHL1-204ENST00000392824 LCE4AQ5TA78 99 aa5.33□□□□□ -1.56
CSHL1-204ENST00000392824 LCE3CQ5T5A8 94 aa5.3□□□□□ -1.56
CSHL1-204ENST00000392824 MT4P47944 62 aa5.24□□□□□ -1.57
CSHL1-204ENST00000392824 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
CSHL1-204ENST00000392824 KRTAP5-4Q6L8H1 288 aa5.23□□□□□ -1.57
CSHL1-204ENST00000392824 HMCN1Q96RW7 5635 aa5.19□□□□□ -1.58
CSHL1-204ENST00000392824 LOC100996750A0A140TA64 210 aa5.17□□□□□ -1.58
CSHL1-204ENST00000392824 PMAIP1Q13794 54 aa5.15□□□□□ -1.59
CSHL1-204ENST00000392824 KRTAP5-5Q701N2 237 aaPredicted RBP5.14□□□□□ -1.59
CSHL1-204ENST00000392824 KRTAP4-6Q9BYQ5 205 aa5.09□□□□□ -1.59
CSHL1-204ENST00000392824 KRTAP12-4P60329 112 aa5.03□□□□□ -1.6
CSHL1-204ENST00000392824 SPRR5A0A1B0GTR4 108 aa4.96□□□□□ -1.62
CSHL1-204ENST00000392824 GPR98Q8WXG9 6306 aa4.94□□□□□ -1.62
CSHL1-204ENST00000392824 KRTAP9-6A8MVA2 160 aa4.94□□□□□ -1.62
CSHL1-204ENST00000392824 KRTAP20-2Q3LI61 65 aa4.94□□□□□ -1.62
CSHL1-204ENST00000392824 PRO0628Q9UI54 55 aa4.93□□□□□ -1.62
CSHL1-204ENST00000392824 SYNE1Q8NF91 8797 aaKnown RBP4.9□□□□□ -1.63
CSHL1-204ENST00000392824 MT1AP04731 61 aa4.89□□□□□ -1.63
CSHL1-204ENST00000392824 AHNAK2Q8IVF2 5795 aa4.88□□□□□ -1.63
CSHL1-204ENST00000392824 PRAC1Q96KF2 57 aa4.86□□□□□ -1.63
CSHL1-204ENST00000392824 KRTAP6-1Q3LI64 71 aa4.84□□□□□ -1.63
CSHL1-204ENST00000392824 KRTAP5-3Q6L8H2 238 aa4.77□□□□□ -1.65
CSHL1-204ENST00000392824 KRTAP5-10Q6L8G5 202 aa4.72□□□□□ -1.65
CSHL1-204ENST00000392824 KRTAP9-4Q9BYQ2 154 aa4.72□□□□□ -1.65
CSHL1-204ENST00000392824 KTN1-AS1Q86SY8 53 aa4.66□□□□□ -1.66
CSHL1-204ENST00000392824 KRTAP5-2Q701N4 177 aa4.62□□□□□ -1.67
CSHL1-204ENST00000392824 KRTAP6-2Q3LI66 62 aa4.59□□□□□ -1.67
CSHL1-204ENST00000392824 KRTAP5-7Q6L8G8 165 aa4.52□□□□□ -1.69
CSHL1-204ENST00000392824 MT3P25713 68 aa4.5□□□□□ -1.69
CSHL1-204ENST00000392824 SVIPQ8NHG7 77 aa4.48□□□□□ -1.69
CSHL1-204ENST00000392824 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
CSHL1-204ENST00000392824 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
CSHL1-204ENST00000392824 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
CSHL1-204ENST00000392824 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
CSHL1-204ENST00000392824 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
CSHL1-204ENST00000392824 MUC5ACP98088 5654 aa4.08□□□□□ -1.76
CSHL1-204ENST00000392824 KRTAP9-9Q9BYP9 154 aa4.07□□□□□ -1.76
CSHL1-204ENST00000392824 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
CSHL1-204ENST00000392824 MUC5BQ9HC84 5762 aaPredicted RBP4.03□□□□□ -1.76
CSHL1-204ENST00000392824 AHNAKQ09666 5890 aaKnown RBP3.99□□□□□ -1.77
CSHL1-204ENST00000392824 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
CSHL1-204ENST00000392824 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
CSHL1-204ENST00000392824 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
CSHL1-204ENST00000392824 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
CSHL1-204ENST00000392824 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
CSHL1-204ENST00000392824 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
CSHL1-204ENST00000392824 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
CSHL1-204ENST00000392824 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
CSHL1-204ENST00000392824 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
CSHL1-204ENST00000392824 H3BS24 57 aa3.3□□□□□ -1.88
CSHL1-204ENST00000392824 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
CSHL1-204ENST00000392824 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
CSHL1-204ENST00000392824 A0A0A0MQY5 61 aa2.92□□□□□ -1.94
CSHL1-204ENST00000392824 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
CSHL1-204ENST00000392824 PRM1P04553 51 aa2.9□□□□□ -1.95
CSHL1-204ENST00000392824 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
CSHL1-204ENST00000392824 INE1O15225 51 aa2.87□□□□□ -1.95
CSHL1-204ENST00000392824 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
CSHL1-204ENST00000392824 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
CSHL1-204ENST00000392824 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 76.5 ms