RNA–Protein interactions for RNA: ENST00000392347.5

CCDC57-206, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-206ENST00000392347 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
CCDC57-206ENST00000392347 MT1LQ93083 61 aa4.47□□□□□ -1.69
CCDC57-206ENST00000392347 CRCT1Q9UGL9 99 aa4.43□□□□□ -1.7
CCDC57-206ENST00000392347 KRTAP12-4P60329 112 aa4.42□□□□□ -1.7
CCDC57-206ENST00000392347 KRTAP4-3Q9BYR4 195 aa4.41□□□□□ -1.7
CCDC57-206ENST00000392347 MT1EP04732 61 aa4.4□□□□□ -1.71
CCDC57-206ENST00000392347 SYNE2Q8WXH0 6885 aaKnown RBP4.35□□□□□ -1.71
CCDC57-206ENST00000392347 MT1GP13640 62 aa4.35□□□□□ -1.71
CCDC57-206ENST00000392347 MACF1Q9UPN3 7388 aaKnown RBP4.32□□□□□ -1.72
CCDC57-206ENST00000392347 SYNE1Q8NF91 8797 aaKnown RBP4.26□□□□□ -1.73
CCDC57-206ENST00000392347 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
CCDC57-206ENST00000392347 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.74
CCDC57-206ENST00000392347 KRTAP4-9Q9BYQ8 210 aa4.21□□□□□ -1.74
CCDC57-206ENST00000392347 MDN1Q9NU22 5596 aa4.19□□□□□ -1.74
CCDC57-206ENST00000392347 LCE3BQ5TA77 95 aa4.16□□□□□ -1.74
CCDC57-206ENST00000392347 KRTAP9-2Q9BYQ4 174 aa4.12□□□□□ -1.75
CCDC57-206ENST00000392347 MT1MQ8N339 61 aa4.09□□□□□ -1.75
CCDC57-206ENST00000392347 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.75
CCDC57-206ENST00000392347 SPRR2FQ96RM1 72 aa4.07□□□□□ -1.76
CCDC57-206ENST00000392347 KRTAP9-7A8MTY7 169 aa4.03□□□□□ -1.76
CCDC57-206ENST00000392347 KRTAP19-3Q7Z4W3 81 aa4.02□□□□□ -1.77
CCDC57-206ENST00000392347 PRM1P04553 51 aa3.98□□□□□ -1.77
CCDC57-206ENST00000392347 LCE3DQ9BYE3 92 aa3.91□□□□□ -1.78
CCDC57-206ENST00000392347 LCE5AQ5TCM9 118 aa3.9□□□□□ -1.79
CCDC57-206ENST00000392347 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
CCDC57-206ENST00000392347 KRTAP6-1Q3LI64 71 aa3.87□□□□□ -1.79
CCDC57-206ENST00000392347 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
CCDC57-206ENST00000392347 MT1AP04731 61 aa3.83□□□□□ -1.8
CCDC57-206ENST00000392347 KRTAP9-6A0A140TA67 174 aa3.76□□□□□ -1.81
CCDC57-206ENST00000392347 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
CCDC57-206ENST00000392347 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
CCDC57-206ENST00000392347 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.81
CCDC57-206ENST00000392347 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
CCDC57-206ENST00000392347 SPRR2EP22531 72 aa3.7□□□□□ -1.82
CCDC57-206ENST00000392347 SPRR2BP35325 72 aa3.7□□□□□ -1.82
CCDC57-206ENST00000392347 SPRR2AP35326 72 aa3.7□□□□□ -1.82
CCDC57-206ENST00000392347 KRTAP6-2Q3LI66 62 aa3.7□□□□□ -1.82
CCDC57-206ENST00000392347 KRTAP6-3Q3LI67 103 aa3.68□□□□□ -1.82
CCDC57-206ENST00000392347 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.63□□□□□ -1.83
CCDC57-206ENST00000392347 LCE4AQ5TA78 99 aa3.6□□□□□ -1.83
CCDC57-206ENST00000392347 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
CCDC57-206ENST00000392347 KRTAP9-9Q9BYP9 154 aa3.58□□□□□ -1.84
CCDC57-206ENST00000392347 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
CCDC57-206ENST00000392347 SPRR2DP22532 72 aa3.52□□□□□ -1.85
CCDC57-206ENST00000392347 LCE1DQ5T752 114 aa3.39□□□□□ -1.87
CCDC57-206ENST00000392347 NEBP20929 6669 aa3.34□□□□□ -1.87
CCDC57-206ENST00000392347 MT3P25713 68 aa3.3□□□□□ -1.88
CCDC57-206ENST00000392347 MT4P47944 62 aa3.28□□□□□ -1.88
CCDC57-206ENST00000392347 KRTAP4-6Q9BYQ5 205 aa3.24□□□□□ -1.89
CCDC57-206ENST00000392347 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
CCDC57-206ENST00000392347 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
CCDC57-206ENST00000392347 KRTAP20-1Q3LI63 56 aa3.04□□□□□ -1.92
CCDC57-206ENST00000392347 KRTAP4-11Q9BYQ6 195 aa3.03□□□□□ -1.92
CCDC57-206ENST00000392347 MUC5ACP98088 5654 aa3□□□□□ -1.93
CCDC57-206ENST00000392347 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
CCDC57-206ENST00000392347 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
CCDC57-206ENST00000392347 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
CCDC57-206ENST00000392347 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
CCDC57-206ENST00000392347 KRTAP5-3Q6L8H2 238 aa2.78□□□□□ -1.96
CCDC57-206ENST00000392347 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
CCDC57-206ENST00000392347 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
CCDC57-206ENST00000392347 GPR98Q8WXG9 6306 aa2.58□□□□□ -2
CCDC57-206ENST00000392347 AHNAK2Q8IVF2 5795 aa2.56□□□□□ -2
CCDC57-206ENST00000392347 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
CCDC57-206ENST00000392347 KRTAP4-12Q9BQ66 201 aa2.49□□□□□ -2.01
CCDC57-206ENST00000392347 KRTAP4-2Q9BYR5 136 aa2.49□□□□□ -2.01
CCDC57-206ENST00000392347 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
CCDC57-206ENST00000392347 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
CCDC57-206ENST00000392347 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
CCDC57-206ENST00000392347 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
CCDC57-206ENST00000392347 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
CCDC57-206ENST00000392347 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
CCDC57-206ENST00000392347 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
CCDC57-206ENST00000392347 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
CCDC57-206ENST00000392347 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
CCDC57-206ENST00000392347 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
CCDC57-206ENST00000392347 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 9.6 ms