RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 KRTAP4-3Q9BYR4 195 aa4.65□□□□□ -1.66
CCDC57-203ENST00000392343 MUC12Q9UKN1 5478 aa4.63□□□□□ -1.67
CCDC57-203ENST00000392343 DSTQ03001 7570 aaKnown RBP4.6□□□□□ -1.67
CCDC57-203ENST00000392343 FCGBPQ9Y6R7 5405 aaPredicted RBP4.6□□□□□ -1.67
CCDC57-203ENST00000392343 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
CCDC57-203ENST00000392343 MT1GP13640 62 aa4.57□□□□□ -1.68
CCDC57-203ENST00000392343 KRTAP19-4Q3LI73 84 aa4.49□□□□□ -1.69
CCDC57-203ENST00000392343 KRTAP19-6Q3LI70 58 aa4.49□□□□□ -1.69
CCDC57-203ENST00000392343 KRTAP9-2Q9BYQ4 174 aa4.48□□□□□ -1.69
CCDC57-203ENST00000392343 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
CCDC57-203ENST00000392343 MT1MQ8N339 61 aa4.39□□□□□ -1.71
CCDC57-203ENST00000392343 KRTAP19-3Q7Z4W3 81 aa4.35□□□□□ -1.71
CCDC57-203ENST00000392343 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
CCDC57-203ENST00000392343 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
CCDC57-203ENST00000392343 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
CCDC57-203ENST00000392343 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
CCDC57-203ENST00000392343 MACF1Q9UPN3 7388 aaKnown RBP4.23□□□□□ -1.73
CCDC57-203ENST00000392343 SYNE2Q8WXH0 6885 aaKnown RBP4.2□□□□□ -1.74
CCDC57-203ENST00000392343 SPRR2FQ96RM1 72 aa4.19□□□□□ -1.74
CCDC57-203ENST00000392343 KRTAP9-6A0A140TA67 174 aa4.16□□□□□ -1.74
CCDC57-203ENST00000392343 LCE5AQ5TCM9 118 aa4.16□□□□□ -1.74
CCDC57-203ENST00000392343 KRTAP2-2Q9BYT5 123 aa4.11□□□□□ -1.75
CCDC57-203ENST00000392343 MDN1Q9NU22 5596 aa4.09□□□□□ -1.75
CCDC57-203ENST00000392343 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
CCDC57-203ENST00000392343 KRTAP9-7A8MTY7 169 aa4.02□□□□□ -1.77
CCDC57-203ENST00000392343 LCE3DQ9BYE3 92 aa4.01□□□□□ -1.77
CCDC57-203ENST00000392343 MT1AP04731 61 aa3.98□□□□□ -1.77
CCDC57-203ENST00000392343 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
CCDC57-203ENST00000392343 PRM1P04553 51 aa3.95□□□□□ -1.78
CCDC57-203ENST00000392343 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.94□□□□□ -1.78
CCDC57-203ENST00000392343 KRTAP5-5Q701N2 237 aaPredicted RBP3.94□□□□□ -1.78
CCDC57-203ENST00000392343 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
CCDC57-203ENST00000392343 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
CCDC57-203ENST00000392343 SPRR2EP22531 72 aa3.84□□□□□ -1.8
CCDC57-203ENST00000392343 SPRR2BP35325 72 aa3.84□□□□□ -1.8
CCDC57-203ENST00000392343 SPRR2AP35326 72 aa3.84□□□□□ -1.8
CCDC57-203ENST00000392343 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
CCDC57-203ENST00000392343 KRTAP6-3Q3LI67 103 aa3.81□□□□□ -1.8
CCDC57-203ENST00000392343 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
CCDC57-203ENST00000392343 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
CCDC57-203ENST00000392343 KRTAP9-4Q9BYQ2 154 aa3.7□□□□□ -1.82
CCDC57-203ENST00000392343 SPRR2DP22532 72 aa3.67□□□□□ -1.82
CCDC57-203ENST00000392343 LCE1DQ5T752 114 aa3.65□□□□□ -1.83
CCDC57-203ENST00000392343 NEBP20929 6669 aa3.57□□□□□ -1.84
CCDC57-203ENST00000392343 MT3P25713 68 aa3.53□□□□□ -1.85
CCDC57-203ENST00000392343 KRTAP5-4Q6L8H1 288 aa3.33□□□□□ -1.88
CCDC57-203ENST00000392343 KRTAP9-9Q9BYP9 154 aa3.33□□□□□ -1.88
CCDC57-203ENST00000392343 KRTAP20-1Q3LI63 56 aa3.32□□□□□ -1.88
CCDC57-203ENST00000392343 MT4P47944 62 aa3.27□□□□□ -1.89
CCDC57-203ENST00000392343 KRTAP4-6Q9BYQ5 205 aa3.26□□□□□ -1.89
CCDC57-203ENST00000392343 LCE4AQ5TA78 99 aa3.2□□□□□ -1.9
CCDC57-203ENST00000392343 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
CCDC57-203ENST00000392343 HMCN1Q96RW7 5635 aa3.13□□□□□ -1.91
CCDC57-203ENST00000392343 KRTAP20-2Q3LI61 65 aa3.11□□□□□ -1.91
CCDC57-203ENST00000392343 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
CCDC57-203ENST00000392343 KRTAP4-11Q9BYQ6 195 aa3.02□□□□□ -1.93
CCDC57-203ENST00000392343 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
CCDC57-203ENST00000392343 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
CCDC57-203ENST00000392343 KRTAP5-10Q6L8G5 202 aa2.88□□□□□ -1.95
CCDC57-203ENST00000392343 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
CCDC57-203ENST00000392343 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
CCDC57-203ENST00000392343 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
CCDC57-203ENST00000392343 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
CCDC57-203ENST00000392343 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
CCDC57-203ENST00000392343 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
CCDC57-203ENST00000392343 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
CCDC57-203ENST00000392343 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
CCDC57-203ENST00000392343 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
CCDC57-203ENST00000392343 KRTAP5-8O75690 187 aa2.54□□□□□ -2
CCDC57-203ENST00000392343 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
CCDC57-203ENST00000392343 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
CCDC57-203ENST00000392343 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
CCDC57-203ENST00000392343 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
CCDC57-203ENST00000392343 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
CCDC57-203ENST00000392343 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
CCDC57-203ENST00000392343 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
CCDC57-203ENST00000392343 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 98.7 ms