RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 LOC100996750A0A140TA64 210 aa6.13□□□□□ -1.43
ERCC2-201ENST00000391941 MT1LQ93083 61 aa6.12□□□□□ -1.43
ERCC2-201ENST00000391941 KRTAP4-3Q9BYR4 195 aa6.12□□□□□ -1.43
ERCC2-201ENST00000391941 MT1EP04732 61 aa6.08□□□□□ -1.44
ERCC2-201ENST00000391941 CRCT1Q9UGL9 99 aa6.04□□□□□ -1.44
ERCC2-201ENST00000391941 KRTAP19-4Q3LI73 84 aa5.96□□□□□ -1.46
ERCC2-201ENST00000391941 MT1GP13640 62 aa5.95□□□□□ -1.46
ERCC2-201ENST00000391941 SYNE1Q8NF91 8797 aaKnown RBP5.87□□□□□ -1.47
ERCC2-201ENST00000391941 LCE2DQ5TA82 110 aaPredicted RBP5.81□□□□□ -1.48
ERCC2-201ENST00000391941 KRTAP19-6Q3LI70 58 aa5.72□□□□□ -1.49
ERCC2-201ENST00000391941 KRTAP12-4P60329 112 aa5.69□□□□□ -1.5
ERCC2-201ENST00000391941 SYNE2Q8WXH0 6885 aaKnown RBP5.67□□□□□ -1.5
ERCC2-201ENST00000391941 MT1MQ8N339 61 aa5.67□□□□□ -1.5
ERCC2-201ENST00000391941 KRTAP4-9Q9BYQ8 210 aa5.67□□□□□ -1.5
ERCC2-201ENST00000391941 OBSCNQ5VST9 7968 aa5.66□□□□□ -1.5
ERCC2-201ENST00000391941 KRTAP19-3Q7Z4W3 81 aa5.62□□□□□ -1.51
ERCC2-201ENST00000391941 LCE3BQ5TA77 95 aa5.6□□□□□ -1.51
ERCC2-201ENST00000391941 MACF1Q9UPN3 7388 aaKnown RBP5.58□□□□□ -1.52
ERCC2-201ENST00000391941 MDN1Q9NU22 5596 aa5.5□□□□□ -1.53
ERCC2-201ENST00000391941 KRTAP2-2Q9BYT5 123 aa5.47□□□□□ -1.53
ERCC2-201ENST00000391941 SPRR2FQ96RM1 72 aa5.46□□□□□ -1.54
ERCC2-201ENST00000391941 LCE5AQ5TCM9 118 aa5.4□□□□□ -1.55
ERCC2-201ENST00000391941 KRTAP6-1Q3LI64 71 aa5.31□□□□□ -1.56
ERCC2-201ENST00000391941 KRTAP9-7A8MTY7 169 aa5.25□□□□□ -1.57
ERCC2-201ENST00000391941 KRTAP9-2Q9BYQ4 174 aa5.24□□□□□ -1.57
ERCC2-201ENST00000391941 LCE1AQ5T7P2 110 aa5.22□□□□□ -1.57
ERCC2-201ENST00000391941 MT1AP04731 61 aa5.18□□□□□ -1.58
ERCC2-201ENST00000391941 KRTAP6-3Q3LI67 103 aa5.14□□□□□ -1.59
ERCC2-201ENST00000391941 LCE3DQ9BYE3 92 aa5.13□□□□□ -1.59
ERCC2-201ENST00000391941 PRM1P04553 51 aa5.1□□□□□ -1.59
ERCC2-201ENST00000391941 LCE1EQ5T753 118 aa5.1□□□□□ -1.59
ERCC2-201ENST00000391941 KRTAP5-5Q701N2 237 aaPredicted RBP5.09□□□□□ -1.59
ERCC2-201ENST00000391941 LCE3EQ5T5B0 92 aa5.06□□□□□ -1.6
ERCC2-201ENST00000391941 KRTAP9-6A0A140TA67 174 aa4.93□□□□□ -1.62
ERCC2-201ENST00000391941 SPRR2EP22531 72 aa4.88□□□□□ -1.63
ERCC2-201ENST00000391941 SPRR2BP35325 72 aa4.88□□□□□ -1.63
ERCC2-201ENST00000391941 SPRR2AP35326 72 aa4.88□□□□□ -1.63
ERCC2-201ENST00000391941 LCE1DQ5T752 114 aa4.86□□□□□ -1.63
ERCC2-201ENST00000391941 KRTAP6-2Q3LI66 62 aa4.86□□□□□ -1.63
ERCC2-201ENST00000391941 LCE1FQ5T754 118 aa4.85□□□□□ -1.63
ERCC2-201ENST00000391941 KRTAP5-9P26371 169 aa4.8□□□□□ -1.64
ERCC2-201ENST00000391941 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
ERCC2-201ENST00000391941 SPRR2DP22532 72 aa4.65□□□□□ -1.66
ERCC2-201ENST00000391941 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.63□□□□□ -1.67
ERCC2-201ENST00000391941 MT3P25713 68 aa4.56□□□□□ -1.68
ERCC2-201ENST00000391941 NEBP20929 6669 aa4.3□□□□□ -1.72
ERCC2-201ENST00000391941 KRTAP4-6Q9BYQ5 205 aa4.29□□□□□ -1.72
ERCC2-201ENST00000391941 MT4P47944 62 aa4.26□□□□□ -1.73
ERCC2-201ENST00000391941 KRTAP5-4Q6L8H1 288 aa4.2□□□□□ -1.74
ERCC2-201ENST00000391941 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
ERCC2-201ENST00000391941 HMCN1Q96RW7 5635 aa4.09□□□□□ -1.75
ERCC2-201ENST00000391941 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
ERCC2-201ENST00000391941 KRTAP5-2Q701N4 177 aa3.98□□□□□ -1.77
ERCC2-201ENST00000391941 KRTAP9-9Q9BYP9 154 aa3.98□□□□□ -1.77
ERCC2-201ENST00000391941 KRTAP4-11Q9BYQ6 195 aa3.93□□□□□ -1.78
ERCC2-201ENST00000391941 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
ERCC2-201ENST00000391941 LCE4AQ5TA78 99 aa3.88□□□□□ -1.79
ERCC2-201ENST00000391941 KRTAP20-1Q3LI63 56 aa3.77□□□□□ -1.81
ERCC2-201ENST00000391941 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
ERCC2-201ENST00000391941 MUC19Q7Z5P9 8384 aa3.72□□□□□ -1.81
ERCC2-201ENST00000391941 KRTAP5-10Q6L8G5 202 aa3.71□□□□□ -1.82
ERCC2-201ENST00000391941 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
ERCC2-201ENST00000391941 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
ERCC2-201ENST00000391941 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
ERCC2-201ENST00000391941 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
ERCC2-201ENST00000391941 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
ERCC2-201ENST00000391941 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
ERCC2-201ENST00000391941 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
ERCC2-201ENST00000391941 AHNAK2Q8IVF2 5795 aa3.21□□□□□ -1.9
ERCC2-201ENST00000391941 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
ERCC2-201ENST00000391941 KRTAP21-1Q3LI58 79 aa3.1□□□□□ -1.91
ERCC2-201ENST00000391941 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.92
ERCC2-201ENST00000391941 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
ERCC2-201ENST00000391941 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
ERCC2-201ENST00000391941 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
ERCC2-201ENST00000391941 PHGR1C9JFL3 82 aa2.55□□□□□ -2
ERCC2-201ENST00000391941 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
ERCC2-201ENST00000391941 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 176.9 ms