RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 MACF1Q9UPN3 7388 aaKnown RBP6.23□□□□□ -1.41
ACTN4-202ENST00000390009 MUC12Q9UKN1 5478 aa6.19□□□□□ -1.42
ACTN4-202ENST00000390009 CRCT1Q9UGL9 99 aa6.19□□□□□ -1.42
ACTN4-202ENST00000390009 KRTAP19-3Q7Z4W3 81 aa6.17□□□□□ -1.42
ACTN4-202ENST00000390009 SPRR2FQ96RM1 72 aa6.16□□□□□ -1.42
ACTN4-202ENST00000390009 MT1GP13640 62 aa6.13□□□□□ -1.43
ACTN4-202ENST00000390009 MT1MQ8N339 61 aa6.1□□□□□ -1.43
ACTN4-202ENST00000390009 KRTAP4-3Q9BYR4 195 aa6.06□□□□□ -1.44
ACTN4-202ENST00000390009 SYNE2Q8WXH0 6885 aaKnown RBP6.03□□□□□ -1.44
ACTN4-202ENST00000390009 LCE5AQ5TCM9 118 aa6.02□□□□□ -1.45
ACTN4-202ENST00000390009 KRTAP5-9P26371 169 aa5.93□□□□□ -1.46
ACTN4-202ENST00000390009 LOC100996750A0A140TA64 210 aa5.93□□□□□ -1.46
ACTN4-202ENST00000390009 KRTAP2-3P0C7H8 128 aa5.87□□□□□ -1.47
ACTN4-202ENST00000390009 KRTAP2-4Q9BYR9 128 aa5.87□□□□□ -1.47
ACTN4-202ENST00000390009 KRTAP2-1Q9BYU5 128 aa5.87□□□□□ -1.47
ACTN4-202ENST00000390009 LCE1AQ5T7P2 110 aa5.83□□□□□ -1.48
ACTN4-202ENST00000390009 DSTQ03001 7570 aaKnown RBP5.81□□□□□ -1.48
ACTN4-202ENST00000390009 MDN1Q9NU22 5596 aa5.8□□□□□ -1.48
ACTN4-202ENST00000390009 SPRR2EP22531 72 aa5.74□□□□□ -1.49
ACTN4-202ENST00000390009 SPRR2BP35325 72 aa5.74□□□□□ -1.49
ACTN4-202ENST00000390009 SPRR2AP35326 72 aa5.74□□□□□ -1.49
ACTN4-202ENST00000390009 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.71□□□□□ -1.5
ACTN4-202ENST00000390009 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
ACTN4-202ENST00000390009 KRTAP6-3Q3LI67 103 aa5.66□□□□□ -1.5
ACTN4-202ENST00000390009 SPRR2DP22532 72 aa5.51□□□□□ -1.53
ACTN4-202ENST00000390009 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
ACTN4-202ENST00000390009 MT1AP04731 61 aa5.42□□□□□ -1.54
ACTN4-202ENST00000390009 KRTAP6-1Q3LI64 71 aa5.42□□□□□ -1.54
ACTN4-202ENST00000390009 LCE3BQ5TA77 95 aa5.36□□□□□ -1.55
ACTN4-202ENST00000390009 KRTAP9-7A8MTY7 169 aa5.28□□□□□ -1.56
ACTN4-202ENST00000390009 NEBP20929 6669 aa5.27□□□□□ -1.57
ACTN4-202ENST00000390009 SYNE1Q8NF91 8797 aaKnown RBP5.24□□□□□ -1.57
ACTN4-202ENST00000390009 KRTAP4-9Q9BYQ8 210 aa5.15□□□□□ -1.58
ACTN4-202ENST00000390009 KRTAP12-4P60329 112 aa5.14□□□□□ -1.59
ACTN4-202ENST00000390009 KRTAP9-4Q9BYQ2 154 aa5.14□□□□□ -1.59
ACTN4-202ENST00000390009 KRTAP5-4Q6L8H1 288 aa5.03□□□□□ -1.6
ACTN4-202ENST00000390009 LCE3DQ9BYE3 92 aa4.96□□□□□ -1.62
ACTN4-202ENST00000390009 KRTAP6-2Q3LI66 62 aa4.94□□□□□ -1.62
ACTN4-202ENST00000390009 MT3P25713 68 aa4.9□□□□□ -1.63
ACTN4-202ENST00000390009 LCE3EQ5T5B0 92 aa4.85□□□□□ -1.63
ACTN4-202ENST00000390009 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
ACTN4-202ENST00000390009 MT4P47944 62 aa4.82□□□□□ -1.64
ACTN4-202ENST00000390009 KRTAP4-6Q9BYQ5 205 aa4.82□□□□□ -1.64
ACTN4-202ENST00000390009 KRTAP2-2Q9BYT5 123 aa4.8□□□□□ -1.64
ACTN4-202ENST00000390009 KRTAP20-2Q3LI61 65 aa4.72□□□□□ -1.65
ACTN4-202ENST00000390009 KRTAP20-1Q3LI63 56 aa4.69□□□□□ -1.66
ACTN4-202ENST00000390009 LCE1DQ5T752 114 aa4.65□□□□□ -1.67
ACTN4-202ENST00000390009 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
ACTN4-202ENST00000390009 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
ACTN4-202ENST00000390009 HMCN1Q96RW7 5635 aa4.62□□□□□ -1.67
ACTN4-202ENST00000390009 PRM1P04553 51 aa4.59□□□□□ -1.67
ACTN4-202ENST00000390009 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
ACTN4-202ENST00000390009 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
ACTN4-202ENST00000390009 MUC5ACP98088 5654 aa4.01□□□□□ -1.77
ACTN4-202ENST00000390009 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
ACTN4-202ENST00000390009 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
ACTN4-202ENST00000390009 KRTAP5-1Q6L8H4 278 aa3.97□□□□□ -1.77
ACTN4-202ENST00000390009 KRTAP5-10Q6L8G5 202 aa3.94□□□□□ -1.78
ACTN4-202ENST00000390009 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
ACTN4-202ENST00000390009 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
ACTN4-202ENST00000390009 LCE1CQ5T751 118 aa3.89□□□□□ -1.79
ACTN4-202ENST00000390009 KRTAP5-8O75690 187 aa3.85□□□□□ -1.79
ACTN4-202ENST00000390009 KRTAP5-7Q6L8G8 165 aa3.76□□□□□ -1.81
ACTN4-202ENST00000390009 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
ACTN4-202ENST00000390009 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
ACTN4-202ENST00000390009 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
ACTN4-202ENST00000390009 GPR98Q8WXG9 6306 aa3.38□□□□□ -1.87
ACTN4-202ENST00000390009 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
ACTN4-202ENST00000390009 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
ACTN4-202ENST00000390009 KRTAP4-12Q9BQ66 201 aa3.2□□□□□ -1.9
ACTN4-202ENST00000390009 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
ACTN4-202ENST00000390009 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
ACTN4-202ENST00000390009 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
ACTN4-202ENST00000390009 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
ACTN4-202ENST00000390009 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
ACTN4-202ENST00000390009 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
ACTN4-202ENST00000390009 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 6.8 ms