RNA–Protein interactions for RNA: ENST00000389463.8

LAMA4-205, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-205ENST00000389463 MT1MQ8N339 61 aa3.52□□□□□ -1.85
LAMA4-205ENST00000389463 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
LAMA4-205ENST00000389463 ABCA13Q86UQ4 5058 aa3.49□□□□□ -1.85
LAMA4-205ENST00000389463 MT3P25713 68 aa3.44□□□□□ -1.86
LAMA4-205ENST00000389463 PRM1P04553 51 aa3.42□□□□□ -1.86
LAMA4-205ENST00000389463 KRTAP20-1Q3LI63 56 aa3.4□□□□□ -1.87
LAMA4-205ENST00000389463 FAT4Q6V0I7 4981 aa3.39□□□□□ -1.87
LAMA4-205ENST00000389463 KRTAP9-7A8MTY7 169 aa3.38□□□□□ -1.87
LAMA4-205ENST00000389463 KRTAP4-3Q9BYR4 195 aa3.37□□□□□ -1.87
LAMA4-205ENST00000389463 LOC100996750A0A140TA64 210 aa3.36□□□□□ -1.87
LAMA4-205ENST00000389463 RNF213Q63HN8 5207 aa3.35□□□□□ -1.87
LAMA4-205ENST00000389463 KRTAP6-3Q3LI67 103 aa3.32□□□□□ -1.88
LAMA4-205ENST00000389463 KRTAP19-7Q3SYF9 63 aa3.31□□□□□ -1.88
LAMA4-205ENST00000389463 UBR4Q5T4S7 5183 aa3.29□□□□□ -1.88
LAMA4-205ENST00000389463 FSIP2Q5CZC0 6907 aa3.29□□□□□ -1.88
LAMA4-205ENST00000389463 LCE1DQ5T752 114 aa3.28□□□□□ -1.88
LAMA4-205ENST00000389463 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
LAMA4-205ENST00000389463 HMCN2Q8NDA2 5059 aa3.26□□□□□ -1.89
LAMA4-205ENST00000389463 MT1AP04731 61 aa3.26□□□□□ -1.89
LAMA4-205ENST00000389463 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
LAMA4-205ENST00000389463 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.25□□□□□ -1.89
LAMA4-205ENST00000389463 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
LAMA4-205ENST00000389463 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
LAMA4-205ENST00000389463 SYNE2Q8WXH0 6885 aaKnown RBP3.14□□□□□ -1.91
LAMA4-205ENST00000389463 KRTAP2-2Q9BYT5 123 aa3.14□□□□□ -1.91
LAMA4-205ENST00000389463 KRTAP2-1Q9BYU5 128 aa3.14□□□□□ -1.91
LAMA4-205ENST00000389463 LCE4AQ5TA78 99 aa3.13□□□□□ -1.91
LAMA4-205ENST00000389463 LCE5AQ5TCM9 118 aa3.12□□□□□ -1.91
LAMA4-205ENST00000389463 MUC2Q02817 5179 aa3.11□□□□□ -1.91
LAMA4-205ENST00000389463 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.91
LAMA4-205ENST00000389463 KRTAP4-9Q9BYQ8 210 aa3.09□□□□□ -1.92
LAMA4-205ENST00000389463 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
LAMA4-205ENST00000389463 KRTAP9-4Q9BYQ2 154 aa3.03□□□□□ -1.92
LAMA4-205ENST00000389463 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
LAMA4-205ENST00000389463 KRTAP9-6A8MVA2 160 aa2.89□□□□□ -1.95
LAMA4-205ENST00000389463 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
LAMA4-205ENST00000389463 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
LAMA4-205ENST00000389463 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
LAMA4-205ENST00000389463 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.95
LAMA4-205ENST00000389463 KRTAP5-9P26371 169 aa2.79□□□□□ -1.96
LAMA4-205ENST00000389463 USH2AO75445 5202 aa2.74□□□□□ -1.97
LAMA4-205ENST00000389463 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
LAMA4-205ENST00000389463 FCGBPQ9Y6R7 5405 aaPredicted RBP2.73□□□□□ -1.97
LAMA4-205ENST00000389463 KMT2DO14686 5537 aa2.69□□□□□ -1.98
LAMA4-205ENST00000389463 NEBP20929 6669 aa2.69□□□□□ -1.98
LAMA4-205ENST00000389463 DSTQ03001 7570 aaKnown RBP2.68□□□□□ -1.98
LAMA4-205ENST00000389463 MACF1Q9UPN3 7388 aaKnown RBP2.66□□□□□ -1.98
LAMA4-205ENST00000389463 SSPOA2VEC9 5147 aa2.66□□□□□ -1.98
LAMA4-205ENST00000389463 KRTAP4-6Q9BYQ5 205 aa2.62□□□□□ -1.99
LAMA4-205ENST00000389463 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -1.99
LAMA4-205ENST00000389463 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
LAMA4-205ENST00000389463 MUC12Q9UKN1 5478 aa2.5□□□□□ -2.01
LAMA4-205ENST00000389463 KRTAP5-4Q6L8H1 288 aa2.46□□□□□ -2.02
LAMA4-205ENST00000389463 MDN1Q9NU22 5596 aa2.35□□□□□ -2.03
LAMA4-205ENST00000389463 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
LAMA4-205ENST00000389463 KRTAP4-12Q9BQ66 201 aa2.3□□□□□ -2.04
LAMA4-205ENST00000389463 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
LAMA4-205ENST00000389463 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
LAMA4-205ENST00000389463 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
LAMA4-205ENST00000389463 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
LAMA4-205ENST00000389463 KRTAP5-3Q6L8H2 238 aa2.17□□□□□ -2.06
LAMA4-205ENST00000389463 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
LAMA4-205ENST00000389463 MUC5ACP98088 5654 aa1.96□□□□□ -2.1
LAMA4-205ENST00000389463 AHNAK2Q8IVF2 5795 aa1.92□□□□□ -2.1
LAMA4-205ENST00000389463 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
LAMA4-205ENST00000389463 KRTAP5-2Q701N4 177 aa1.88□□□□□ -2.11
LAMA4-205ENST00000389463 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
LAMA4-205ENST00000389463 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
LAMA4-205ENST00000389463 MUC5BQ9HC84 5762 aaPredicted RBP1.7□□□□□ -2.14
LAMA4-205ENST00000389463 KRTAP5-11Q6L8G4 156 aa1.68□□□□□ -2.14
LAMA4-205ENST00000389463 KRTAP5-1Q6L8H4 278 aa1.65□□□□□ -2.15
LAMA4-205ENST00000389463 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
LAMA4-205ENST00000389463 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
LAMA4-205ENST00000389463 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.16
LAMA4-205ENST00000389463 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.46□□□□□ -2.18
LAMA4-205ENST00000389463 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
LAMA4-205ENST00000389463 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms