RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 HMGN1P05114 100 aa-6.01□□□□□ -3.37
RNU6-1340P-201ENST00000384438 ATXN8Q156A1 80 aa-6.01□□□□□ -3.37
RNU6-1340P-201ENST00000384438 ATP7AQ04656 1500 aa-6.01□□□□□ -3.37
RNU6-1340P-201ENST00000384438 SERF2P84101 59 aa-6.02□□□□□ -3.37
RNU6-1340P-201ENST00000384438 TCEAL7Q9BRU2 100 aa-6.02□□□□□ -3.37
RNU6-1340P-201ENST00000384438 ABCA6Q8N139 1617 aa-6.04□□□□□ -3.38
RNU6-1340P-201ENST00000384438 IQGAP3Q86VI3 1631 aa-6.05□□□□□ -3.38
RNU6-1340P-201ENST00000384438 ABCA9Q8IUA7 1624 aa-6.05□□□□□ -3.38
RNU6-1340P-201ENST00000384438 GNG10P50151 68 aa-6.05□□□□□ -3.38
RNU6-1340P-201ENST00000384438 E5RI56 91 aa-6.06□□□□□ -3.38
RNU6-1340P-201ENST00000384438 H3BVH4 76 aa-6.06□□□□□ -3.38
RNU6-1340P-201ENST00000384438 ABCA5Q8WWZ7 1642 aa-6.09□□□□□ -3.38
RNU6-1340P-201ENST00000384438 S100A10P60903 97 aa-6.09□□□□□ -3.38
RNU6-1340P-201ENST00000384438 NCMAPQ5T1S8 102 aa-6.09□□□□□ -3.38
RNU6-1340P-201ENST00000384438 ABCC8Q09428 1581 aa-6.1□□□□□ -3.39
RNU6-1340P-201ENST00000384438 A0A087WWC5 75 aa-6.1□□□□□ -3.39
RNU6-1340P-201ENST00000384438 IQGAP1P46940 1657 aa-6.12□□□□□ -3.39
RNU6-1340P-201ENST00000384438 GTF2H5Q6ZYL4 71 aa-6.12□□□□□ -3.39
RNU6-1340P-201ENST00000384438 PKIAP61925 76 aa-6.13□□□□□ -3.39
RNU6-1340P-201ENST00000384438 ERICH3Q5RHP9 1530 aa-6.14□□□□□ -3.39
RNU6-1340P-201ENST00000384438 CORTO00230 105 aa-6.14□□□□□ -3.39
RNU6-1340P-201ENST00000384438 KANTRA0A1W2PQU2 76 aa-6.15□□□□□ -3.39
RNU6-1340P-201ENST00000384438 LINC00587B1AMM8 73 aa-6.15□□□□□ -3.39
RNU6-1340P-201ENST00000384438 SMIM15Q7Z3B0 74 aa-6.15□□□□□ -3.39
RNU6-1340P-201ENST00000384438 ST20Q9HBF5 79 aa-6.15□□□□□ -3.39
RNU6-1340P-201ENST00000384438 LINC01549A6NIU2 74 aa-6.17□□□□□ -3.4
RNU6-1340P-201ENST00000384438 H3BSH0 61 aa-6.18□□□□□ -3.4
RNU6-1340P-201ENST00000384438 PLNP26678 52 aa-6.18□□□□□ -3.4
RNU6-1340P-201ENST00000384438 CHMP6Q96FZ7 201 aa-6.19□□□□□ -3.4
RNU6-1340P-201ENST00000384438 GNG14A0A1W2PPG7 69 aa-6.2□□□□□ -3.4
RNU6-1340P-201ENST00000384438 S100A16Q96FQ6 103 aaKnown RBP-6.2□□□□□ -3.4
RNU6-1340P-201ENST00000384438 PYY3Q5JQD4 70 aa-6.23□□□□□ -3.41
RNU6-1340P-201ENST00000384438 ABCA10Q8WWZ4 1543 aa-6.24□□□□□ -3.41
RNU6-1340P-201ENST00000384438 SAMD9LQ8IVG5 1584 aa-6.27□□□□□ -3.41
RNU6-1340P-201ENST00000384438 RPL39P62891 51 aaKnown RBP-6.28□□□□□ -3.41
RNU6-1340P-201ENST00000384438 HILPDAQ9Y5L2 63 aa-6.28□□□□□ -3.41
RNU6-1340P-201ENST00000384438 UGGT2Q9NYU1 1516 aa-6.29□□□□□ -3.42
RNU6-1340P-201ENST00000384438 A0A1B0GV90 55 aa-6.33□□□□□ -3.42
RNU6-1340P-201ENST00000384438 GNG13Q9P2W3 67 aa-6.33□□□□□ -3.42
RNU6-1340P-201ENST00000384438 CPS1P31327 1500 aa-6.37□□□□□ -3.43
RNU6-1340P-201ENST00000384438 MROH2BQ7Z745 1585 aa-6.38□□□□□ -3.43
RNU6-1340P-201ENST00000384438 RPL39LQ96EH5 51 aaKnown RBP-6.39□□□□□ -3.43
RNU6-1340P-201ENST00000384438 C18orf32Q8TCD1 76 aa-6.41□□□□□ -3.44
RNU6-1340P-201ENST00000384438 GNG8Q9UK08 70 aa-6.44□□□□□ -3.44
RNU6-1340P-201ENST00000384438 PRCDQ00LT1 54 aa-6.46□□□□□ -3.44
RNU6-1340P-201ENST00000384438 ADIRFQ15847 76 aa-6.48□□□□□ -3.45
RNU6-1340P-201ENST00000384438 CNTLNQ9NXG0 1405 aa-6.49□□□□□ -3.45
RNU6-1340P-201ENST00000384438 EFCAB5A4FU69 1503 aa-6.49□□□□□ -3.45
RNU6-1340P-201ENST00000384438 Q9Y3F1 56 aa-6.49□□□□□ -3.45
RNU6-1340P-201ENST00000384438 TMEM167AQ8TBQ9 72 aa-6.51□□□□□ -3.45
RNU6-1340P-201ENST00000384438 C14orf144Q96I85 54 aa-6.52□□□□□ -3.45
RNU6-1340P-201ENST00000384438 FANCD2Q9BXW9 1451 aa-6.53□□□□□ -3.46
RNU6-1340P-201ENST00000384438 M0R143 59 aa-6.54□□□□□ -3.46
RNU6-1340P-201ENST00000384438 K7EIM0 57 aa-6.56□□□□□ -3.46
RNU6-1340P-201ENST00000384438 Q9H521 79 aa-6.56□□□□□ -3.46
RNU6-1340P-201ENST00000384438 COX14Q96I36 57 aa-6.61□□□□□ -3.47
RNU6-1340P-201ENST00000384438 IQGAP2Q13576 1575 aa-6.63□□□□□ -3.47
RNU6-1340P-201ENST00000384438 DEFB108BQ8NET1 73 aa-6.69□□□□□ -3.48
RNU6-1340P-201ENST00000384438 SMCO4Q9NRQ5 59 aa-6.69□□□□□ -3.48
RNU6-1340P-201ENST00000384438 S100A13Q99584 98 aa-6.71□□□□□ -3.48
RNU6-1340P-201ENST00000384438 LOC105371267A0A1B0GV96 52 aa-6.73□□□□□ -3.49
RNU6-1340P-201ENST00000384438 STATHP02808 62 aa-6.75□□□□□ -3.49
RNU6-1340P-201ENST00000384438 CMC2Q9NRP2 79 aa-6.76□□□□□ -3.49
RNU6-1340P-201ENST00000384438 ATP6V1G2-DDX39BF2Z307 99 aa-6.78□□□□□ -3.49
RNU6-1340P-201ENST00000384438 ARHGAP5-AS1Q96IT6 56 aa-6.78□□□□□ -3.49
RNU6-1340P-201ENST00000384438 V9GYS6 101 aa-6.78□□□□□ -3.49
RNU6-1340P-201ENST00000384438 EFCAB10A6NFE3 127 aa-6.92□□□□□ -3.52
RNU6-1340P-201ENST00000384438 SNRPGP15A8MWD9 76 aa-6.92□□□□□ -3.52
RNU6-1340P-201ENST00000384438 DEFB108AA8MXU0 73 aa-6.93□□□□□ -3.52
RNU6-1340P-201ENST00000384438 RPL39P5Q59GN2 51 aa-7.1□□□□□ -3.55
RNU6-1340P-201ENST00000384438 SMIM5Q71RC9 77 aa-7.18□□□□□ -3.56
RNU6-1340P-201ENST00000384438 PTMSP20962 102 aa-7.23□□□□□ -3.57
RNU6-1340P-201ENST00000384438 GCC2Q8IWJ2 1684 aa-7.23□□□□□ -3.57
RNU6-1340P-201ENST00000384438 SNRPGP62308 76 aaKnown RBP-7.29□□□□□ -3.58
RNU6-1340P-201ENST00000384438 GNG2P59768 71 aa-7.61□□□□□ -3.63
RNU6-1340P-201ENST00000384438 TOMM5Q8N4H5 51 aa-7.81□□□□□ -3.66
RNU6-1340P-201ENST00000384438 SMIM31A0A1B0GVY4 71 aa-7.87□□□□□ -3.67
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms