RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 TNXBP22105 4242 aa2.05□□□□□ -2.08
GEN1-202ENST00000381254 KRTAP19-2Q3LHN2 52 aa2.05□□□□□ -2.08
GEN1-202ENST00000381254 NEBP20929 6669 aa2.04□□□□□ -2.08
GEN1-202ENST00000381254 SSPOA2VEC9 5147 aa2.04□□□□□ -2.08
GEN1-202ENST00000381254 LCE4AQ5TA78 99 aa2.01□□□□□ -2.09
GEN1-202ENST00000381254 MT1GP13640 62 aa1.99□□□□□ -2.09
GEN1-202ENST00000381254 MT1BP07438 61 aa1.99□□□□□ -2.09
GEN1-202ENST00000381254 GPR98Q8WXG9 6306 aa1.98□□□□□ -2.09
GEN1-202ENST00000381254 KRTAP19-5Q3LI72 72 aa1.97□□□□□ -2.09
GEN1-202ENST00000381254 MUC2Q02817 5179 aa1.97□□□□□ -2.09
GEN1-202ENST00000381254 MT1XP80297 61 aa1.95□□□□□ -2.1
GEN1-202ENST00000381254 USH2AO75445 5202 aa1.93□□□□□ -2.1
GEN1-202ENST00000381254 MT1LQ93083 61 aa1.93□□□□□ -2.1
GEN1-202ENST00000381254 LPAP08519 4548 aa1.92□□□□□ -2.1
GEN1-202ENST00000381254 KRTAP19-3Q7Z4W3 81 aa1.92□□□□□ -2.1
GEN1-202ENST00000381254 KRTAP4-9Q9BYQ8 210 aa1.91□□□□□ -2.1
GEN1-202ENST00000381254 FSIP2Q5CZC0 6907 aa1.91□□□□□ -2.1
GEN1-202ENST00000381254 KRTAP5-9P26371 169 aa1.9□□□□□ -2.11
GEN1-202ENST00000381254 MT1EP04732 61 aa1.87□□□□□ -2.11
GEN1-202ENST00000381254 LCE3EQ5T5B0 92 aa1.85□□□□□ -2.11
GEN1-202ENST00000381254 LOC100996750A0A140TA64 210 aa1.84□□□□□ -2.12
GEN1-202ENST00000381254 KRTAP4-6Q9BYQ5 205 aa1.84□□□□□ -2.12
GEN1-202ENST00000381254 KRTAP4-8A0A0G2JLE6 195 aa1.83□□□□□ -2.12
GEN1-202ENST00000381254 KRTAP4-8Q9BYQ9 185 aa1.83□□□□□ -2.12
GEN1-202ENST00000381254 FLGP20930 4061 aaPredicted RBP1.82□□□□□ -2.12
GEN1-202ENST00000381254 LCE3DQ9BYE3 92 aa1.81□□□□□ -2.12
GEN1-202ENST00000381254 KRTAP9-9Q9BYP9 154 aa1.81□□□□□ -2.12
GEN1-202ENST00000381254 FCGBPQ9Y6R7 5405 aaPredicted RBP1.79□□□□□ -2.12
GEN1-202ENST00000381254 MT3P25713 68 aa1.77□□□□□ -2.13
GEN1-202ENST00000381254 LCE1DQ5T752 114 aa1.76□□□□□ -2.13
GEN1-202ENST00000381254 MT1MQ8N339 61 aa1.75□□□□□ -2.13
GEN1-202ENST00000381254 MACF1Q9UPN3 7388 aaKnown RBP1.73□□□□□ -2.13
GEN1-202ENST00000381254 MT1AP04731 61 aa1.73□□□□□ -2.13
GEN1-202ENST00000381254 KRTAP4-7Q9BYR0 210 aa1.71□□□□□ -2.14
GEN1-202ENST00000381254 SYNE1Q8NF91 8797 aaKnown RBP1.68□□□□□ -2.14
GEN1-202ENST00000381254 KRTAP19-7Q3SYF9 63 aa1.68□□□□□ -2.14
GEN1-202ENST00000381254 LCE5AQ5TCM9 118 aa1.67□□□□□ -2.14
GEN1-202ENST00000381254 KMT2DO14686 5537 aa1.65□□□□□ -2.15
GEN1-202ENST00000381254 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
GEN1-202ENST00000381254 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
GEN1-202ENST00000381254 KRTAP5-4Q6L8H1 288 aa1.62□□□□□ -2.15
GEN1-202ENST00000381254 HMCN1Q96RW7 5635 aa1.62□□□□□ -2.15
GEN1-202ENST00000381254 LCE1BQ5T7P3 118 aa1.6□□□□□ -2.15
GEN1-202ENST00000381254 KRTAP5-3Q6L8H2 238 aa1.6□□□□□ -2.15
GEN1-202ENST00000381254 MDN1Q9NU22 5596 aa1.6□□□□□ -2.15
GEN1-202ENST00000381254 MUC12Q9UKN1 5478 aa1.59□□□□□ -2.16
GEN1-202ENST00000381254 KRTAP5-2Q701N4 177 aa1.57□□□□□ -2.16
GEN1-202ENST00000381254 KRTAP20-2Q3LI61 65 aa1.56□□□□□ -2.16
GEN1-202ENST00000381254 KRTAP9-4Q9BYQ2 154 aa1.56□□□□□ -2.16
GEN1-202ENST00000381254 KRTAP5-10Q6L8G5 202 aa1.54□□□□□ -2.16
GEN1-202ENST00000381254 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.16
GEN1-202ENST00000381254 KRTAP4-12Q9BQ66 201 aa1.53□□□□□ -2.16
GEN1-202ENST00000381254 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.53□□□□□ -2.17
GEN1-202ENST00000381254 KRTAP4-3Q9BYR4 195 aa1.52□□□□□ -2.17
GEN1-202ENST00000381254 PRM1P04553 51 aa1.52□□□□□ -2.17
GEN1-202ENST00000381254 MUC5BQ9HC84 5762 aaPredicted RBP1.52□□□□□ -2.17
GEN1-202ENST00000381254 KRTAP4-11Q9BYQ6 195 aa1.51□□□□□ -2.17
GEN1-202ENST00000381254 LCE1CQ5T751 118 aa1.5□□□□□ -2.17
GEN1-202ENST00000381254 LCE1EQ5T753 118 aa1.5□□□□□ -2.17
GEN1-202ENST00000381254 LCE1FQ5T754 118 aa1.5□□□□□ -2.17
GEN1-202ENST00000381254 KRTAP6-2Q3LI66 62 aa1.46□□□□□ -2.18
GEN1-202ENST00000381254 OBSCNQ5VST9 7968 aa1.45□□□□□ -2.18
GEN1-202ENST00000381254 KRTAP9-6A8MVA2 160 aa1.43□□□□□ -2.18
GEN1-202ENST00000381254 KRTAP6-1Q3LI64 71 aa1.4□□□□□ -2.18
GEN1-202ENST00000381254 KRTAP4-2Q9BYR5 136 aa1.39□□□□□ -2.19
GEN1-202ENST00000381254 KRTAP5-8O75690 187 aa1.36□□□□□ -2.19
GEN1-202ENST00000381254 DSTQ03001 7570 aaKnown RBP1.33□□□□□ -2.2
GEN1-202ENST00000381254 MUC19Q7Z5P9 8384 aa1.31□□□□□ -2.2
GEN1-202ENST00000381254 MUC5ACP98088 5654 aa1.31□□□□□ -2.2
GEN1-202ENST00000381254 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
GEN1-202ENST00000381254 KRTAP5-5Q701N2 237 aaPredicted RBP1.23□□□□□ -2.21
GEN1-202ENST00000381254 KRTAP5-1Q6L8H4 278 aa1.11□□□□□ -2.23
GEN1-202ENST00000381254 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
GEN1-202ENST00000381254 KRTAP4-4Q9BYR3 166 aa1□□□□□ -2.25
GEN1-202ENST00000381254 KRTAP5-11Q6L8G4 156 aa0.98□□□□□ -2.25
GEN1-202ENST00000381254 KRTAP21-2Q3LI59 83 aa0.92□□□□□ -2.26
GEN1-202ENST00000381254 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 66.7 ms