RNA–Protein interactions for RNA: ENST00000381227.5

POLR2B-202, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene POLR2B, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-202ENST00000381227 KRTAP19-6Q3LI70 58 aa2.34□□□□□ -2.04
POLR2B-202ENST00000381227 CRCT1Q9UGL9 99 aa2.33□□□□□ -2.04
POLR2B-202ENST00000381227 KRTAP4-7Q9BYR0 210 aa2.33□□□□□ -2.04
POLR2B-202ENST00000381227 MDN1Q9NU22 5596 aa2.33□□□□□ -2.04
POLR2B-202ENST00000381227 DSTQ03001 7570 aaKnown RBP2.32□□□□□ -2.04
POLR2B-202ENST00000381227 KRTAP9-6A0A140TA67 174 aa2.32□□□□□ -2.04
POLR2B-202ENST00000381227 KRTAP9-7A8MTY7 169 aa2.32□□□□□ -2.04
POLR2B-202ENST00000381227 KRTAP19-7Q3SYF9 63 aa2.3□□□□□ -2.04
POLR2B-202ENST00000381227 MT1EP04732 61 aa2.27□□□□□ -2.05
POLR2B-202ENST00000381227 MT1LQ93083 61 aa2.27□□□□□ -2.05
POLR2B-202ENST00000381227 KRTAP9-9Q9BYP9 154 aa2.26□□□□□ -2.05
POLR2B-202ENST00000381227 SPRR2FQ96RM1 72 aa2.24□□□□□ -2.05
POLR2B-202ENST00000381227 KRTAP9-6A8MVA2 160 aa2.23□□□□□ -2.05
POLR2B-202ENST00000381227 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
POLR2B-202ENST00000381227 MT1GP13640 62 aa2.21□□□□□ -2.06
POLR2B-202ENST00000381227 MT3P25713 68 aa2.2□□□□□ -2.06
POLR2B-202ENST00000381227 KRTAP4-3Q9BYR4 195 aa2.19□□□□□ -2.06
POLR2B-202ENST00000381227 LOC100996750A0A140TA64 210 aa2.17□□□□□ -2.06
POLR2B-202ENST00000381227 KRTAP19-3Q7Z4W3 81 aa2.17□□□□□ -2.06
POLR2B-202ENST00000381227 OBSCNQ5VST9 7968 aa2.17□□□□□ -2.06
POLR2B-202ENST00000381227 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.15□□□□□ -2.07
POLR2B-202ENST00000381227 MT1MQ8N339 61 aa2.15□□□□□ -2.07
POLR2B-202ENST00000381227 KRTAP2-3P0C7H8 128 aa2.11□□□□□ -2.07
POLR2B-202ENST00000381227 KRTAP2-4Q9BYR9 128 aa2.11□□□□□ -2.07
POLR2B-202ENST00000381227 KRTAP2-1Q9BYU5 128 aa2.11□□□□□ -2.07
POLR2B-202ENST00000381227 KRTAP2-2Q9BYT5 123 aa2.1□□□□□ -2.07
POLR2B-202ENST00000381227 SYNE1Q8NF91 8797 aaKnown RBP2.1□□□□□ -2.07
POLR2B-202ENST00000381227 LCE3BQ5TA77 95 aa2.08□□□□□ -2.08
POLR2B-202ENST00000381227 LCE1AQ5T7P2 110 aa2.08□□□□□ -2.08
POLR2B-202ENST00000381227 KRTAP5-9P26371 169 aa2.06□□□□□ -2.08
POLR2B-202ENST00000381227 SPRR2EP22531 72 aa2.05□□□□□ -2.08
POLR2B-202ENST00000381227 SPRR2BP35325 72 aa2.05□□□□□ -2.08
POLR2B-202ENST00000381227 SPRR2AP35326 72 aa2.05□□□□□ -2.08
POLR2B-202ENST00000381227 KRTAP12-4P60329 112 aa2.03□□□□□ -2.08
POLR2B-202ENST00000381227 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
POLR2B-202ENST00000381227 NEBP20929 6669 aa2□□□□□ -2.09
POLR2B-202ENST00000381227 KRTAP6-3Q3LI67 103 aa2□□□□□ -2.09
POLR2B-202ENST00000381227 LCE1EQ5T753 118 aa1.99□□□□□ -2.09
POLR2B-202ENST00000381227 KRTAP4-9Q9BYQ8 210 aa1.96□□□□□ -2.1
POLR2B-202ENST00000381227 SPRR2DP22532 72 aa1.96□□□□□ -2.1
POLR2B-202ENST00000381227 KRTAP6-1Q3LI64 71 aa1.94□□□□□ -2.1
POLR2B-202ENST00000381227 LCE3DQ9BYE3 92 aa1.92□□□□□ -2.1
POLR2B-202ENST00000381227 MT1AP04731 61 aa1.92□□□□□ -2.1
POLR2B-202ENST00000381227 KRTAP4-6Q9BYQ5 205 aa1.9□□□□□ -2.11
POLR2B-202ENST00000381227 LCE1DQ5T752 114 aa1.87□□□□□ -2.11
POLR2B-202ENST00000381227 KRTAP4-12Q9BQ66 201 aa1.86□□□□□ -2.11
POLR2B-202ENST00000381227 KRTAP5-5Q701N2 237 aaPredicted RBP1.82□□□□□ -2.12
POLR2B-202ENST00000381227 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
POLR2B-202ENST00000381227 KRTAP6-2Q3LI66 62 aa1.79□□□□□ -2.12
POLR2B-202ENST00000381227 PRM1P04553 51 aa1.78□□□□□ -2.12
POLR2B-202ENST00000381227 MT4P47944 62 aa1.76□□□□□ -2.13
POLR2B-202ENST00000381227 KRTAP20-1Q3LI63 56 aa1.74□□□□□ -2.13
POLR2B-202ENST00000381227 KRTAP5-4Q6L8H1 288 aa1.71□□□□□ -2.14
POLR2B-202ENST00000381227 KRTAP20-2Q3LI61 65 aa1.64□□□□□ -2.15
POLR2B-202ENST00000381227 GPR98Q8WXG9 6306 aa1.59□□□□□ -2.16
POLR2B-202ENST00000381227 KRTAP5-3Q6L8H2 238 aa1.58□□□□□ -2.16
POLR2B-202ENST00000381227 LCE1BQ5T7P3 118 aa1.57□□□□□ -2.16
POLR2B-202ENST00000381227 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
POLR2B-202ENST00000381227 KRTAP5-2Q701N4 177 aa1.55□□□□□ -2.16
POLR2B-202ENST00000381227 KRTAP4-11Q9BYQ6 195 aa1.54□□□□□ -2.16
POLR2B-202ENST00000381227 AHNAK2Q8IVF2 5795 aa1.51□□□□□ -2.17
POLR2B-202ENST00000381227 MUC5ACP98088 5654 aa1.45□□□□□ -2.18
POLR2B-202ENST00000381227 KRTAP4-2Q9BYR5 136 aa1.43□□□□□ -2.18
POLR2B-202ENST00000381227 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
POLR2B-202ENST00000381227 KRTAP5-1Q6L8H4 278 aa1.4□□□□□ -2.19
POLR2B-202ENST00000381227 KRTAP5-10Q6L8G5 202 aa1.39□□□□□ -2.19
POLR2B-202ENST00000381227 KRTAP5-8O75690 187 aa1.39□□□□□ -2.19
POLR2B-202ENST00000381227 LCE1CQ5T751 118 aa1.29□□□□□ -2.2
POLR2B-202ENST00000381227 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
POLR2B-202ENST00000381227 KRTAP4-4Q9BYR3 166 aa1.25□□□□□ -2.21
POLR2B-202ENST00000381227 KRTAP5-7Q6L8G8 165 aa1.24□□□□□ -2.21
POLR2B-202ENST00000381227 KRTAP21-2Q3LI59 83 aa1.19□□□□□ -2.22
POLR2B-202ENST00000381227 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.15□□□□□ -2.23
POLR2B-202ENST00000381227 KRTAP5-11Q6L8G4 156 aa1.11□□□□□ -2.23
POLR2B-202ENST00000381227 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
POLR2B-202ENST00000381227 PHGR1C9JFL3 82 aa0.97□□□□□ -2.25
POLR2B-202ENST00000381227 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 67.5 ms