RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 PRO2289Q9P1D8 64 aa4.66□□□□□ -1.66
TRIM23-203ENST00000381018 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
TRIM23-203ENST00000381018 KRTAP10-7P60409 375 aaPredicted RBP4.64□□□□□ -1.67
TRIM23-203ENST00000381018 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
TRIM23-203ENST00000381018 LCE3CQ5T5A8 94 aa4.37□□□□□ -1.71
TRIM23-203ENST00000381018 USH2AO75445 5202 aa4.32□□□□□ -1.72
TRIM23-203ENST00000381018 INE1O15225 51 aa4.27□□□□□ -1.73
TRIM23-203ENST00000381018 KMT2DO14686 5537 aa4.27□□□□□ -1.73
TRIM23-203ENST00000381018 KRTAP19-7Q3SYF9 63 aa4.26□□□□□ -1.73
TRIM23-203ENST00000381018 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
TRIM23-203ENST00000381018 MT1EP04732 61 aa4.15□□□□□ -1.74
TRIM23-203ENST00000381018 SSPOA2VEC9 5147 aa4.15□□□□□ -1.75
TRIM23-203ENST00000381018 MT1LQ93083 61 aa4.15□□□□□ -1.75
TRIM23-203ENST00000381018 FSIP2Q5CZC0 6907 aa4.14□□□□□ -1.75
TRIM23-203ENST00000381018 CRCT1Q9UGL9 99 aa4.13□□□□□ -1.75
TRIM23-203ENST00000381018 KRTAP19-6Q3LI70 58 aa4.13□□□□□ -1.75
TRIM23-203ENST00000381018 KRTAP2-3P0C7H8 128 aa4.05□□□□□ -1.76
TRIM23-203ENST00000381018 KRTAP2-4Q9BYR9 128 aa4.05□□□□□ -1.76
TRIM23-203ENST00000381018 KRTAP2-1Q9BYU5 128 aa4.05□□□□□ -1.76
TRIM23-203ENST00000381018 KRTAP19-3Q7Z4W3 81 aa3.9□□□□□ -1.79
TRIM23-203ENST00000381018 KRTAP4-3Q9BYR4 195 aa3.89□□□□□ -1.79
TRIM23-203ENST00000381018 MT1GP13640 62 aa3.88□□□□□ -1.79
TRIM23-203ENST00000381018 MT1MQ8N339 61 aa3.88□□□□□ -1.79
TRIM23-203ENST00000381018 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.86□□□□□ -1.79
TRIM23-203ENST00000381018 FCGBPQ9Y6R7 5405 aaPredicted RBP3.84□□□□□ -1.79
TRIM23-203ENST00000381018 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
TRIM23-203ENST00000381018 SPRR2FQ96RM1 72 aa3.76□□□□□ -1.81
TRIM23-203ENST00000381018 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
TRIM23-203ENST00000381018 MACF1Q9UPN3 7388 aaKnown RBP3.62□□□□□ -1.83
TRIM23-203ENST00000381018 SYNE2Q8WXH0 6885 aaKnown RBP3.62□□□□□ -1.83
TRIM23-203ENST00000381018 DSTQ03001 7570 aaKnown RBP3.6□□□□□ -1.83
TRIM23-203ENST00000381018 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
TRIM23-203ENST00000381018 KRTAP5-9P26371 169 aa3.52□□□□□ -1.85
TRIM23-203ENST00000381018 LCE1AQ5T7P2 110 aa3.51□□□□□ -1.85
TRIM23-203ENST00000381018 MT1AP04731 61 aa3.5□□□□□ -1.85
TRIM23-203ENST00000381018 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
TRIM23-203ENST00000381018 SPRR2EP22531 72 aa3.44□□□□□ -1.86
TRIM23-203ENST00000381018 SPRR2BP35325 72 aa3.44□□□□□ -1.86
TRIM23-203ENST00000381018 SPRR2AP35326 72 aa3.44□□□□□ -1.86
TRIM23-203ENST00000381018 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
TRIM23-203ENST00000381018 KRTAP5-5Q701N2 237 aaPredicted RBP3.44□□□□□ -1.86
TRIM23-203ENST00000381018 KRTAP20-1Q3LI63 56 aa3.43□□□□□ -1.86
TRIM23-203ENST00000381018 MDN1Q9NU22 5596 aa3.4□□□□□ -1.86
TRIM23-203ENST00000381018 NEBP20929 6669 aa3.4□□□□□ -1.87
TRIM23-203ENST00000381018 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
TRIM23-203ENST00000381018 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
TRIM23-203ENST00000381018 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
TRIM23-203ENST00000381018 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
TRIM23-203ENST00000381018 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
TRIM23-203ENST00000381018 SPRR2DP22532 72 aa3.29□□□□□ -1.88
TRIM23-203ENST00000381018 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
TRIM23-203ENST00000381018 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
TRIM23-203ENST00000381018 KRTAP2-2Q9BYT5 123 aa3.19□□□□□ -1.9
TRIM23-203ENST00000381018 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
TRIM23-203ENST00000381018 PRM1P04553 51 aa3.14□□□□□ -1.91
TRIM23-203ENST00000381018 MT3P25713 68 aa3.14□□□□□ -1.91
TRIM23-203ENST00000381018 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.91
TRIM23-203ENST00000381018 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
TRIM23-203ENST00000381018 MT4P47944 62 aa2.88□□□□□ -1.95
TRIM23-203ENST00000381018 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
TRIM23-203ENST00000381018 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.95
TRIM23-203ENST00000381018 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
TRIM23-203ENST00000381018 AHNAK2Q8IVF2 5795 aa2.7□□□□□ -1.98
TRIM23-203ENST00000381018 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.99
TRIM23-203ENST00000381018 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
TRIM23-203ENST00000381018 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
TRIM23-203ENST00000381018 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
TRIM23-203ENST00000381018 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
TRIM23-203ENST00000381018 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
TRIM23-203ENST00000381018 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
TRIM23-203ENST00000381018 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
TRIM23-203ENST00000381018 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
TRIM23-203ENST00000381018 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
TRIM23-203ENST00000381018 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
TRIM23-203ENST00000381018 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
TRIM23-203ENST00000381018 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
TRIM23-203ENST00000381018 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 124.3 ms