RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 MUC12Q9UKN1 5478 aa5.52□□□□□ -1.52
NKX3-1-201ENST00000380871 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
NKX3-1-201ENST00000380871 CRCT1Q9UGL9 99 aa5.46□□□□□ -1.54
NKX3-1-201ENST00000380871 LOC100996750A0A140TA64 210 aa5.41□□□□□ -1.54
NKX3-1-201ENST00000380871 DSTQ03001 7570 aaKnown RBP5.41□□□□□ -1.54
NKX3-1-201ENST00000380871 LCE2DQ5TA82 110 aaPredicted RBP5.4□□□□□ -1.54
NKX3-1-201ENST00000380871 SPRR2FQ96RM1 72 aa5.36□□□□□ -1.55
NKX3-1-201ENST00000380871 MT1GP13640 62 aa5.35□□□□□ -1.55
NKX3-1-201ENST00000380871 KRTAP19-3Q7Z4W3 81 aa5.28□□□□□ -1.56
NKX3-1-201ENST00000380871 KRTAP19-4Q3LI73 84 aa5.27□□□□□ -1.57
NKX3-1-201ENST00000380871 MT1MQ8N339 61 aa5.26□□□□□ -1.57
NKX3-1-201ENST00000380871 MACF1Q9UPN3 7388 aaKnown RBP5.26□□□□□ -1.57
NKX3-1-201ENST00000380871 KRTAP9-2Q9BYQ4 174 aa5.17□□□□□ -1.58
NKX3-1-201ENST00000380871 SYNE2Q8WXH0 6885 aaKnown RBP5.17□□□□□ -1.58
NKX3-1-201ENST00000380871 SYNE1Q8NF91 8797 aaKnown RBP5.08□□□□□ -1.6
NKX3-1-201ENST00000380871 LCE5AQ5TCM9 118 aa5.07□□□□□ -1.6
NKX3-1-201ENST00000380871 MDN1Q9NU22 5596 aa5.01□□□□□ -1.61
NKX3-1-201ENST00000380871 KRTAP12-4P60329 112 aa5.01□□□□□ -1.61
NKX3-1-201ENST00000380871 LCE3BQ5TA77 95 aa4.94□□□□□ -1.62
NKX3-1-201ENST00000380871 KRTAP4-9Q9BYQ8 210 aa4.94□□□□□ -1.62
NKX3-1-201ENST00000380871 SPRR2EP22531 72 aa4.9□□□□□ -1.62
NKX3-1-201ENST00000380871 SPRR2BP35325 72 aa4.9□□□□□ -1.62
NKX3-1-201ENST00000380871 SPRR2AP35326 72 aa4.9□□□□□ -1.62
NKX3-1-201ENST00000380871 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
NKX3-1-201ENST00000380871 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
NKX3-1-201ENST00000380871 KRTAP6-1Q3LI64 71 aa4.8□□□□□ -1.64
NKX3-1-201ENST00000380871 KRTAP5-9P26371 169 aa4.75□□□□□ -1.65
NKX3-1-201ENST00000380871 SPRR2DP22532 72 aa4.67□□□□□ -1.66
NKX3-1-201ENST00000380871 MT1AP04731 61 aa4.64□□□□□ -1.67
NKX3-1-201ENST00000380871 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.62□□□□□ -1.67
NKX3-1-201ENST00000380871 LCE3DQ9BYE3 92 aa4.59□□□□□ -1.67
NKX3-1-201ENST00000380871 KRTAP9-7A8MTY7 169 aa4.57□□□□□ -1.68
NKX3-1-201ENST00000380871 KRTAP5-5Q701N2 237 aaPredicted RBP4.53□□□□□ -1.68
NKX3-1-201ENST00000380871 LCE3EQ5T5B0 92 aa4.52□□□□□ -1.69
NKX3-1-201ENST00000380871 KRTAP9-6A0A140TA67 174 aa4.5□□□□□ -1.69
NKX3-1-201ENST00000380871 KRTAP6-3Q3LI67 103 aa4.49□□□□□ -1.69
NKX3-1-201ENST00000380871 PRM1P04553 51 aa4.47□□□□□ -1.69
NKX3-1-201ENST00000380871 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
NKX3-1-201ENST00000380871 KRTAP6-2Q3LI66 62 aa4.36□□□□□ -1.71
NKX3-1-201ENST00000380871 MT4P47944 62 aa4.25□□□□□ -1.73
NKX3-1-201ENST00000380871 MT3P25713 68 aa4.22□□□□□ -1.73
NKX3-1-201ENST00000380871 KRTAP4-6Q9BYQ5 205 aa4.18□□□□□ -1.74
NKX3-1-201ENST00000380871 NEBP20929 6669 aa4.16□□□□□ -1.74
NKX3-1-201ENST00000380871 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
NKX3-1-201ENST00000380871 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
NKX3-1-201ENST00000380871 LCE1DQ5T752 114 aa3.9□□□□□ -1.78
NKX3-1-201ENST00000380871 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
NKX3-1-201ENST00000380871 LCE4AQ5TA78 99 aa3.88□□□□□ -1.79
NKX3-1-201ENST00000380871 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
NKX3-1-201ENST00000380871 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
NKX3-1-201ENST00000380871 KRTAP5-2Q701N4 177 aa3.73□□□□□ -1.81
NKX3-1-201ENST00000380871 KRTAP5-3Q6L8H2 238 aa3.67□□□□□ -1.82
NKX3-1-201ENST00000380871 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
NKX3-1-201ENST00000380871 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
NKX3-1-201ENST00000380871 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
NKX3-1-201ENST00000380871 KRTAP5-10Q6L8G5 202 aa3.36□□□□□ -1.87
NKX3-1-201ENST00000380871 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
NKX3-1-201ENST00000380871 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
NKX3-1-201ENST00000380871 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
NKX3-1-201ENST00000380871 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
NKX3-1-201ENST00000380871 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
NKX3-1-201ENST00000380871 KRTAP4-12Q9BQ66 201 aa3.18□□□□□ -1.9
NKX3-1-201ENST00000380871 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
NKX3-1-201ENST00000380871 AHNAK2Q8IVF2 5795 aa3.08□□□□□ -1.92
NKX3-1-201ENST00000380871 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
NKX3-1-201ENST00000380871 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
NKX3-1-201ENST00000380871 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
NKX3-1-201ENST00000380871 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
NKX3-1-201ENST00000380871 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.93□□□□□ -1.94
NKX3-1-201ENST00000380871 KRTAP5-7Q6L8G8 165 aa2.87□□□□□ -1.95
NKX3-1-201ENST00000380871 GPR98Q8WXG9 6306 aa2.78□□□□□ -1.96
NKX3-1-201ENST00000380871 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
NKX3-1-201ENST00000380871 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
NKX3-1-201ENST00000380871 LCE1FQ5T754 118 aa2.57□□□□□ -2
NKX3-1-201ENST00000380871 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
NKX3-1-201ENST00000380871 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
NKX3-1-201ENST00000380871 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 124.5 ms