RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
SNAPC3-202ENST00000380821 PCLOQ9Y6V0 5065 aa5.02□□□□□ -1.61
SNAPC3-202ENST00000380821 LRP2P98164 4655 aa5.01□□□□□ -1.61
SNAPC3-202ENST00000380821 KRTAP4-3Q9BYR4 195 aa5.01□□□□□ -1.61
SNAPC3-202ENST00000380821 MT1AP04731 61 aa4.98□□□□□ -1.61
SNAPC3-202ENST00000380821 MT4P47944 62 aa4.97□□□□□ -1.61
SNAPC3-202ENST00000380821 KMT2CQ8NEZ4 4911 aaKnown RBP4.94□□□□□ -1.62
SNAPC3-202ENST00000380821 KRTAP19-7Q3SYF9 63 aa4.93□□□□□ -1.62
SNAPC3-202ENST00000380821 LCE1BQ5T7P3 118 aa4.9□□□□□ -1.62
SNAPC3-202ENST00000380821 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
SNAPC3-202ENST00000380821 KRTAP9-6A0A140TA67 174 aa4.83□□□□□ -1.64
SNAPC3-202ENST00000380821 KRTAP4-9Q9BYQ8 210 aa4.79□□□□□ -1.64
SNAPC3-202ENST00000380821 LCE2AQ5TA79 106 aaPredicted RBP4.72□□□□□ -1.65
SNAPC3-202ENST00000380821 EPPK1P58107 5090 aaKnown RBP4.67□□□□□ -1.66
SNAPC3-202ENST00000380821 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.67
SNAPC3-202ENST00000380821 ABCA13Q86UQ4 5058 aa4.62□□□□□ -1.67
SNAPC3-202ENST00000380821 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.67
SNAPC3-202ENST00000380821 KRTAP6-1Q3LI64 71 aa4.59□□□□□ -1.67
SNAPC3-202ENST00000380821 KRTAP9-6A8MVA2 160 aa4.59□□□□□ -1.68
SNAPC3-202ENST00000380821 KRTAP20-1Q3LI63 56 aa4.59□□□□□ -1.68
SNAPC3-202ENST00000380821 LCE5AQ5TCM9 118 aa4.58□□□□□ -1.68
SNAPC3-202ENST00000380821 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
SNAPC3-202ENST00000380821 KRTAP9-7A8MTY7 169 aa4.51□□□□□ -1.69
SNAPC3-202ENST00000380821 FAT4Q6V0I7 4981 aa4.49□□□□□ -1.69
SNAPC3-202ENST00000380821 HMCN2Q8NDA2 5059 aa4.49□□□□□ -1.69
SNAPC3-202ENST00000380821 SYNE1Q8NF91 8797 aaKnown RBP4.48□□□□□ -1.69
SNAPC3-202ENST00000380821 RNF213Q63HN8 5207 aa4.45□□□□□ -1.7
SNAPC3-202ENST00000380821 KRTAP6-3Q3LI67 103 aa4.45□□□□□ -1.7
SNAPC3-202ENST00000380821 LCE4AQ5TA78 99 aa4.38□□□□□ -1.71
SNAPC3-202ENST00000380821 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
SNAPC3-202ENST00000380821 KRTAP2-2Q9BYT5 123 aa4.24□□□□□ -1.73
SNAPC3-202ENST00000380821 SYNE2Q8WXH0 6885 aaKnown RBP4.23□□□□□ -1.73
SNAPC3-202ENST00000380821 UBR4Q5T4S7 5183 aa4.2□□□□□ -1.74
SNAPC3-202ENST00000380821 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
SNAPC3-202ENST00000380821 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
SNAPC3-202ENST00000380821 LCE1FQ5T754 118 aa4.16□□□□□ -1.74
SNAPC3-202ENST00000380821 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
SNAPC3-202ENST00000380821 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
SNAPC3-202ENST00000380821 MUC2Q02817 5179 aa4.01□□□□□ -1.77
SNAPC3-202ENST00000380821 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.79
SNAPC3-202ENST00000380821 KRTAP9-9Q9BYP9 154 aa3.77□□□□□ -1.81
SNAPC3-202ENST00000380821 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
SNAPC3-202ENST00000380821 NEBP20929 6669 aa3.68□□□□□ -1.82
SNAPC3-202ENST00000380821 USH2AO75445 5202 aa3.64□□□□□ -1.83
SNAPC3-202ENST00000380821 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
SNAPC3-202ENST00000380821 MACF1Q9UPN3 7388 aaKnown RBP3.56□□□□□ -1.84
SNAPC3-202ENST00000380821 SSPOA2VEC9 5147 aa3.56□□□□□ -1.84
SNAPC3-202ENST00000380821 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
SNAPC3-202ENST00000380821 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
SNAPC3-202ENST00000380821 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
SNAPC3-202ENST00000380821 DSTQ03001 7570 aaKnown RBP3.47□□□□□ -1.85
SNAPC3-202ENST00000380821 FCGBPQ9Y6R7 5405 aaPredicted RBP3.42□□□□□ -1.86
SNAPC3-202ENST00000380821 KMT2DO14686 5537 aa3.41□□□□□ -1.86
SNAPC3-202ENST00000380821 KRTAP5-4Q6L8H1 288 aa3.39□□□□□ -1.87
SNAPC3-202ENST00000380821 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
SNAPC3-202ENST00000380821 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
SNAPC3-202ENST00000380821 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
SNAPC3-202ENST00000380821 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
SNAPC3-202ENST00000380821 MUC12Q9UKN1 5478 aa3.16□□□□□ -1.9
SNAPC3-202ENST00000380821 MDN1Q9NU22 5596 aa3.02□□□□□ -1.93
SNAPC3-202ENST00000380821 KRTAP5-3Q6L8H2 238 aa2.92□□□□□ -1.94
SNAPC3-202ENST00000380821 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
SNAPC3-202ENST00000380821 KRTAP5-8O75690 187 aa2.63□□□□□ -1.99
SNAPC3-202ENST00000380821 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
SNAPC3-202ENST00000380821 KRTAP5-2Q701N4 177 aa2.59□□□□□ -2
SNAPC3-202ENST00000380821 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
SNAPC3-202ENST00000380821 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
SNAPC3-202ENST00000380821 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
SNAPC3-202ENST00000380821 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
SNAPC3-202ENST00000380821 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.02
SNAPC3-202ENST00000380821 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
SNAPC3-202ENST00000380821 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
SNAPC3-202ENST00000380821 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
SNAPC3-202ENST00000380821 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
SNAPC3-202ENST00000380821 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
SNAPC3-202ENST00000380821 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.14□□□□□ -2.07
SNAPC3-202ENST00000380821 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 228.7 ms